Genome-wide relaxation of selection and the evolution of the island syndrome in Orkney voles

Island populations often experience different ecological and demographic conditions than their counterparts on the continent, resulting in divergent evolutionary forces affecting their genomes. Random genetic drift and selection both may leave their imprints on island populations, although the relat...

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Published in:Genome Research
Main Authors: Wang, Xuejing, Heckel, Gerald
Format: Text
Language:English
Published: Cold Spring Harbor Laboratory Press 2024
Subjects:
Online Access:http://genome.cshlp.org/cgi/content/short/34/6/851
https://doi.org/10.1101/gr.278487.123
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spelling fthighwire:oai:open-archive.highwire.org:genome:34/6/851 2024-09-15T18:18:47+00:00 Genome-wide relaxation of selection and the evolution of the island syndrome in Orkney voles Wang, Xuejing Heckel, Gerald 2024-06-01 00:00:00.0 text/html http://genome.cshlp.org/cgi/content/short/34/6/851 https://doi.org/10.1101/gr.278487.123 en eng Cold Spring Harbor Laboratory Press http://genome.cshlp.org/cgi/content/short/34/6/851 http://dx.doi.org/10.1101/gr.278487.123 Copyright (C) 2024, Cold Spring Harbor Laboratory Press RESEARCH TEXT 2024 fthighwire https://doi.org/10.1101/gr.278487.123 2024-07-30T15:49:43Z Island populations often experience different ecological and demographic conditions than their counterparts on the continent, resulting in divergent evolutionary forces affecting their genomes. Random genetic drift and selection both may leave their imprints on island populations, although the relative impact depends strongly on the specific conditions. Here we address their contributions to the island syndrome in a rodent with an unusually clear history of isolation. Common voles ( Microtus arvalis ) were introduced by humans on the Orkney archipelago north of Scotland >5000 years ago and rapidly evolved to exceptionally large size. Our analyses show that the genomes of Orkney voles were dominated by genetic drift, with extremely low diversity, variable Tajima's D , and very high divergence from continental conspecifics. Increased d N / d S ratios over a wide range of genes in Orkney voles indicated genome-wide relaxation of purifying selection. We found evidence of hard sweeps on key genes of the lipid metabolism pathway only in continental voles. The marked increase of body size in Orkney—a typical phenomenon of the island syndrome—may thus be associated to the relaxation of positive selection on genes related to this pathway. On the other hand, a hard sweep on immune genes of Orkney voles likely reflects the divergent ecological conditions and possibly the history of human introduction. The long-term isolated Orkney voles show that adaptive changes may still impact the evolutionary trajectories of such populations despite the pervasive consequences of genetic drift at the genome level. Text Microtus arvalis HighWire Press (Stanford University) Genome Research 34 6 851 862
institution Open Polar
collection HighWire Press (Stanford University)
op_collection_id fthighwire
language English
topic RESEARCH
spellingShingle RESEARCH
Wang, Xuejing
Heckel, Gerald
Genome-wide relaxation of selection and the evolution of the island syndrome in Orkney voles
topic_facet RESEARCH
description Island populations often experience different ecological and demographic conditions than their counterparts on the continent, resulting in divergent evolutionary forces affecting their genomes. Random genetic drift and selection both may leave their imprints on island populations, although the relative impact depends strongly on the specific conditions. Here we address their contributions to the island syndrome in a rodent with an unusually clear history of isolation. Common voles ( Microtus arvalis ) were introduced by humans on the Orkney archipelago north of Scotland >5000 years ago and rapidly evolved to exceptionally large size. Our analyses show that the genomes of Orkney voles were dominated by genetic drift, with extremely low diversity, variable Tajima's D , and very high divergence from continental conspecifics. Increased d N / d S ratios over a wide range of genes in Orkney voles indicated genome-wide relaxation of purifying selection. We found evidence of hard sweeps on key genes of the lipid metabolism pathway only in continental voles. The marked increase of body size in Orkney—a typical phenomenon of the island syndrome—may thus be associated to the relaxation of positive selection on genes related to this pathway. On the other hand, a hard sweep on immune genes of Orkney voles likely reflects the divergent ecological conditions and possibly the history of human introduction. The long-term isolated Orkney voles show that adaptive changes may still impact the evolutionary trajectories of such populations despite the pervasive consequences of genetic drift at the genome level.
format Text
author Wang, Xuejing
Heckel, Gerald
author_facet Wang, Xuejing
Heckel, Gerald
author_sort Wang, Xuejing
title Genome-wide relaxation of selection and the evolution of the island syndrome in Orkney voles
title_short Genome-wide relaxation of selection and the evolution of the island syndrome in Orkney voles
title_full Genome-wide relaxation of selection and the evolution of the island syndrome in Orkney voles
title_fullStr Genome-wide relaxation of selection and the evolution of the island syndrome in Orkney voles
title_full_unstemmed Genome-wide relaxation of selection and the evolution of the island syndrome in Orkney voles
title_sort genome-wide relaxation of selection and the evolution of the island syndrome in orkney voles
publisher Cold Spring Harbor Laboratory Press
publishDate 2024
url http://genome.cshlp.org/cgi/content/short/34/6/851
https://doi.org/10.1101/gr.278487.123
genre Microtus arvalis
genre_facet Microtus arvalis
op_relation http://genome.cshlp.org/cgi/content/short/34/6/851
http://dx.doi.org/10.1101/gr.278487.123
op_rights Copyright (C) 2024, Cold Spring Harbor Laboratory Press
op_doi https://doi.org/10.1101/gr.278487.123
container_title Genome Research
container_volume 34
container_issue 6
container_start_page 851
op_container_end_page 862
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