SHIMMER (1.0): a novel mathematical model for microbial and biogeochemical dynamics in glacier forefield ecosystems

SHIMMER (Soil biogeocHemIcal Model for Microbial Ecosystem Response) is a new numerical modelling framework designed to simulate microbial dynamics and biogeochemical cycling during initial ecosystem development in glacier forefield soils. However, it is also transferable to other extreme ecosystem...

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Published in:Geoscientific Model Development
Main Authors: Bradley, J., Anesio, A., Singarayer, J., Heath, M., Arndt, S.
Format: Article in Journal/Newspaper
Language:English
Published: 2015
Subjects:
Online Access:https://gfzpublic.gfz-potsdam.de/pubman/item/item_4566900
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spelling ftgfzpotsdam:oai:gfzpublic.gfz-potsdam.de:item_4566900 2024-06-02T08:07:08+00:00 SHIMMER (1.0): a novel mathematical model for microbial and biogeochemical dynamics in glacier forefield ecosystems Bradley, J. Anesio, A. Singarayer, J. Heath, M. Arndt, S. 2015 https://gfzpublic.gfz-potsdam.de/pubman/item/item_4566900 eng eng info:eu-repo/semantics/altIdentifier/doi/10.5194/gmd-8-3441-2015 https://gfzpublic.gfz-potsdam.de/pubman/item/item_4566900 Geoscientific Model Development info:eu-repo/semantics/article 2015 ftgfzpotsdam https://doi.org/10.5194/gmd-8-3441-2015 2024-05-07T04:20:38Z SHIMMER (Soil biogeocHemIcal Model for Microbial Ecosystem Response) is a new numerical modelling framework designed to simulate microbial dynamics and biogeochemical cycling during initial ecosystem development in glacier forefield soils. However, it is also transferable to other extreme ecosystem types (such as desert soils or the surface of glaciers). The rationale for model development arises from decades of empirical observations in glacier forefields, and enables a quantitative and process focussed approach. Here, we provide a detailed description of SHIMMER, test its performance in two case study forefields: the Damma Glacier (Switzerland) and the Athabasca Glacier (Canada) and analyse sensitivity to identify the most sensitive and unconstrained model parameters. Results show that the accumulation of microbial biomass is highly dependent on variation in microbial growth and death rate constants, Q10 values, the active fraction of microbial biomass and the reactivity of organic matter. The model correctly predicts the rapid accumulation of microbial biomass observed during the initial stages of succession in the forefields of both the case study systems. Primary production is responsible for the initial build-up of labile substrate that subsequently supports heterotrophic growth. However, allochthonous contributions of organic matter, and nitrogen fixation, are important in sustaining this productivity. The development and application of SHIMMER also highlights aspects of these systems that require further empirical research: quantifying nutrient budgets and biogeochemical rates, exploring seasonality and microbial growth and cell death. This will lead to increased understanding of how glacier forefields contribute to global biogeochemical cycling and climate under future ice retreat. Article in Journal/Newspaper glacier* GFZpublic (German Research Centre for Geosciences, Helmholtz-Zentrum Potsdam) Canada Geoscientific Model Development 8 10 3441 3470
institution Open Polar
collection GFZpublic (German Research Centre for Geosciences, Helmholtz-Zentrum Potsdam)
op_collection_id ftgfzpotsdam
language English
description SHIMMER (Soil biogeocHemIcal Model for Microbial Ecosystem Response) is a new numerical modelling framework designed to simulate microbial dynamics and biogeochemical cycling during initial ecosystem development in glacier forefield soils. However, it is also transferable to other extreme ecosystem types (such as desert soils or the surface of glaciers). The rationale for model development arises from decades of empirical observations in glacier forefields, and enables a quantitative and process focussed approach. Here, we provide a detailed description of SHIMMER, test its performance in two case study forefields: the Damma Glacier (Switzerland) and the Athabasca Glacier (Canada) and analyse sensitivity to identify the most sensitive and unconstrained model parameters. Results show that the accumulation of microbial biomass is highly dependent on variation in microbial growth and death rate constants, Q10 values, the active fraction of microbial biomass and the reactivity of organic matter. The model correctly predicts the rapid accumulation of microbial biomass observed during the initial stages of succession in the forefields of both the case study systems. Primary production is responsible for the initial build-up of labile substrate that subsequently supports heterotrophic growth. However, allochthonous contributions of organic matter, and nitrogen fixation, are important in sustaining this productivity. The development and application of SHIMMER also highlights aspects of these systems that require further empirical research: quantifying nutrient budgets and biogeochemical rates, exploring seasonality and microbial growth and cell death. This will lead to increased understanding of how glacier forefields contribute to global biogeochemical cycling and climate under future ice retreat.
format Article in Journal/Newspaper
author Bradley, J.
Anesio, A.
Singarayer, J.
Heath, M.
Arndt, S.
spellingShingle Bradley, J.
Anesio, A.
Singarayer, J.
Heath, M.
Arndt, S.
SHIMMER (1.0): a novel mathematical model for microbial and biogeochemical dynamics in glacier forefield ecosystems
author_facet Bradley, J.
Anesio, A.
Singarayer, J.
Heath, M.
Arndt, S.
author_sort Bradley, J.
title SHIMMER (1.0): a novel mathematical model for microbial and biogeochemical dynamics in glacier forefield ecosystems
title_short SHIMMER (1.0): a novel mathematical model for microbial and biogeochemical dynamics in glacier forefield ecosystems
title_full SHIMMER (1.0): a novel mathematical model for microbial and biogeochemical dynamics in glacier forefield ecosystems
title_fullStr SHIMMER (1.0): a novel mathematical model for microbial and biogeochemical dynamics in glacier forefield ecosystems
title_full_unstemmed SHIMMER (1.0): a novel mathematical model for microbial and biogeochemical dynamics in glacier forefield ecosystems
title_sort shimmer (1.0): a novel mathematical model for microbial and biogeochemical dynamics in glacier forefield ecosystems
publishDate 2015
url https://gfzpublic.gfz-potsdam.de/pubman/item/item_4566900
geographic Canada
geographic_facet Canada
genre glacier*
genre_facet glacier*
op_source Geoscientific Model Development
op_relation info:eu-repo/semantics/altIdentifier/doi/10.5194/gmd-8-3441-2015
https://gfzpublic.gfz-potsdam.de/pubman/item/item_4566900
op_doi https://doi.org/10.5194/gmd-8-3441-2015
container_title Geoscientific Model Development
container_volume 8
container_issue 10
container_start_page 3441
op_container_end_page 3470
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