Data_Sheet_1_Modeling the Transmission of Vibrio aestuarianus in Pacific Oysters Using Experimental Infection Data.docx

Vibrio aestuarianus is a bacterium related to mortality outbreaks in Pacific oysters, Crassostrea gigas, in France, Ireland, and Scotland since 2011. Knowledge about its transmission dynamics is still lacking, impairing guidance to prevent and control the related disease spread. Mathematical modelin...

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Main Authors: Coralie Lupo, Marie-Agnès Travers, Delphine Tourbiez, Clément Félix Barthélémy, Gaël Beaunée, Pauline Ezanno
Format: Dataset
Language:unknown
Published: 2019
Subjects:
Online Access:https://doi.org/10.3389/fvets.2019.00142.s001
https://figshare.com/articles/Data_Sheet_1_Modeling_the_Transmission_of_Vibrio_aestuarianus_in_Pacific_Oysters_Using_Experimental_Infection_Data_docx/8121785
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spelling ftfrontimediafig:oai:figshare.com:article/8121785 2023-05-15T15:58:36+02:00 Data_Sheet_1_Modeling the Transmission of Vibrio aestuarianus in Pacific Oysters Using Experimental Infection Data.docx Coralie Lupo Marie-Agnès Travers Delphine Tourbiez Clément Félix Barthélémy Gaël Beaunée Pauline Ezanno 2019-05-14T04:45:00Z https://doi.org/10.3389/fvets.2019.00142.s001 https://figshare.com/articles/Data_Sheet_1_Modeling_the_Transmission_of_Vibrio_aestuarianus_in_Pacific_Oysters_Using_Experimental_Infection_Data_docx/8121785 unknown doi:10.3389/fvets.2019.00142.s001 https://figshare.com/articles/Data_Sheet_1_Modeling_the_Transmission_of_Vibrio_aestuarianus_in_Pacific_Oysters_Using_Experimental_Infection_Data_docx/8121785 CC BY 4.0 CC-BY Animal Systematics and Taxonomy Animal Physiology - Biophysics Animal Physiology - Cell Animal Physiology - Systems Animal Behaviour Animal Cell and Molecular Biology Animal Developmental and Reproductive Biology Animal Immunology Animal Neurobiology Animal Physiological Ecology Animal Structure and Function Veterinary Anaesthesiology and Intensive Care Veterinary Anatomy and Physiology Veterinary Diagnosis and Diagnostics Veterinary Epidemiology Veterinary Immunology Veterinary Medicine Veterinary Microbiology (excl. Virology) Veterinary Parasitology Veterinary Pathology Veterinary Pharmacology Veterinary Surgery Veterinary Virology Veterinary Sciences not elsewhere classified marine epidemiology parameter estimation compartmental model ABC method global sensitivity analysis basic reproduction number R0 Crassostrea gigas oyster mortality Dataset 2019 ftfrontimediafig https://doi.org/10.3389/fvets.2019.00142.s001 2019-05-15T22:58:47Z Vibrio aestuarianus is a bacterium related to mortality outbreaks in Pacific oysters, Crassostrea gigas, in France, Ireland, and Scotland since 2011. Knowledge about its transmission dynamics is still lacking, impairing guidance to prevent and control the related disease spread. Mathematical modeling is a relevant approach to better understand the determinants of a disease and predict its dynamics in imperfectly observed pathosystems. We developed here the first marine epidemiological model to estimate the key parameters of V. aestuarianus infection at a local scale in a small and closed oyster population under controlled laboratory conditions. Using a compartmental model accounting for free-living bacteria in seawater, we predicted the infection dynamics using dedicated and model-driven collected laboratory experimental transmission data. We estimated parameters and showed that waterborne transmission of V. aestuarianus is possible under experimental conditions, with a basic reproduction number R 0 of 2.88 (95% CI: 1.86; 3.35), and a generation time of 5.5 days. Our results highlighted a bacterial dose–dependent transmission of vibriosis at local scale. Global sensitivity analyses indicated that the bacteria shedding rate, the concentration of bacteria in seawater that yields a 50% chance of catching the infection, and the initial bacterial exposure dose W 0 were three critical parameters explaining most of the variation in the selected model outputs related to disease spread, i.e., R 0 , the maximum prevalence, oyster survival curve, and bacteria concentration in seawater. Prevention and control should target the exposure of oysters to bacterial concentration in seawater. This combined laboratory–modeling approach enabled us to maximize the use of information obtained through experiments. The identified key epidemiological parameters should be better refined by further dedicated laboratory experiments. These results revealed the importance of multidisciplinary approaches to gain consistent insights into the ... Dataset Crassostrea gigas Frontiers: Figshare Pacific
institution Open Polar
collection Frontiers: Figshare
op_collection_id ftfrontimediafig
language unknown
topic Animal Systematics and Taxonomy
Animal Physiology - Biophysics
Animal Physiology - Cell
Animal Physiology - Systems
Animal Behaviour
Animal Cell and Molecular Biology
Animal Developmental and Reproductive Biology
Animal Immunology
Animal Neurobiology
Animal Physiological Ecology
Animal Structure and Function
Veterinary Anaesthesiology and Intensive Care
Veterinary Anatomy and Physiology
Veterinary Diagnosis and Diagnostics
Veterinary Epidemiology
Veterinary Immunology
Veterinary Medicine
Veterinary Microbiology (excl. Virology)
Veterinary Parasitology
Veterinary Pathology
Veterinary Pharmacology
Veterinary Surgery
Veterinary Virology
Veterinary Sciences not elsewhere classified
marine epidemiology
parameter estimation
compartmental model
ABC method
global sensitivity analysis
basic reproduction number R0
Crassostrea gigas
oyster mortality
spellingShingle Animal Systematics and Taxonomy
Animal Physiology - Biophysics
Animal Physiology - Cell
Animal Physiology - Systems
Animal Behaviour
Animal Cell and Molecular Biology
Animal Developmental and Reproductive Biology
Animal Immunology
Animal Neurobiology
Animal Physiological Ecology
Animal Structure and Function
Veterinary Anaesthesiology and Intensive Care
Veterinary Anatomy and Physiology
Veterinary Diagnosis and Diagnostics
Veterinary Epidemiology
Veterinary Immunology
Veterinary Medicine
Veterinary Microbiology (excl. Virology)
Veterinary Parasitology
Veterinary Pathology
Veterinary Pharmacology
Veterinary Surgery
Veterinary Virology
Veterinary Sciences not elsewhere classified
marine epidemiology
parameter estimation
compartmental model
ABC method
global sensitivity analysis
basic reproduction number R0
Crassostrea gigas
oyster mortality
Coralie Lupo
Marie-Agnès Travers
Delphine Tourbiez
Clément Félix Barthélémy
Gaël Beaunée
Pauline Ezanno
Data_Sheet_1_Modeling the Transmission of Vibrio aestuarianus in Pacific Oysters Using Experimental Infection Data.docx
topic_facet Animal Systematics and Taxonomy
Animal Physiology - Biophysics
Animal Physiology - Cell
Animal Physiology - Systems
Animal Behaviour
Animal Cell and Molecular Biology
Animal Developmental and Reproductive Biology
Animal Immunology
Animal Neurobiology
Animal Physiological Ecology
Animal Structure and Function
Veterinary Anaesthesiology and Intensive Care
Veterinary Anatomy and Physiology
Veterinary Diagnosis and Diagnostics
Veterinary Epidemiology
Veterinary Immunology
Veterinary Medicine
Veterinary Microbiology (excl. Virology)
Veterinary Parasitology
Veterinary Pathology
Veterinary Pharmacology
Veterinary Surgery
Veterinary Virology
Veterinary Sciences not elsewhere classified
marine epidemiology
parameter estimation
compartmental model
ABC method
global sensitivity analysis
basic reproduction number R0
Crassostrea gigas
oyster mortality
description Vibrio aestuarianus is a bacterium related to mortality outbreaks in Pacific oysters, Crassostrea gigas, in France, Ireland, and Scotland since 2011. Knowledge about its transmission dynamics is still lacking, impairing guidance to prevent and control the related disease spread. Mathematical modeling is a relevant approach to better understand the determinants of a disease and predict its dynamics in imperfectly observed pathosystems. We developed here the first marine epidemiological model to estimate the key parameters of V. aestuarianus infection at a local scale in a small and closed oyster population under controlled laboratory conditions. Using a compartmental model accounting for free-living bacteria in seawater, we predicted the infection dynamics using dedicated and model-driven collected laboratory experimental transmission data. We estimated parameters and showed that waterborne transmission of V. aestuarianus is possible under experimental conditions, with a basic reproduction number R 0 of 2.88 (95% CI: 1.86; 3.35), and a generation time of 5.5 days. Our results highlighted a bacterial dose–dependent transmission of vibriosis at local scale. Global sensitivity analyses indicated that the bacteria shedding rate, the concentration of bacteria in seawater that yields a 50% chance of catching the infection, and the initial bacterial exposure dose W 0 were three critical parameters explaining most of the variation in the selected model outputs related to disease spread, i.e., R 0 , the maximum prevalence, oyster survival curve, and bacteria concentration in seawater. Prevention and control should target the exposure of oysters to bacterial concentration in seawater. This combined laboratory–modeling approach enabled us to maximize the use of information obtained through experiments. The identified key epidemiological parameters should be better refined by further dedicated laboratory experiments. These results revealed the importance of multidisciplinary approaches to gain consistent insights into the ...
format Dataset
author Coralie Lupo
Marie-Agnès Travers
Delphine Tourbiez
Clément Félix Barthélémy
Gaël Beaunée
Pauline Ezanno
author_facet Coralie Lupo
Marie-Agnès Travers
Delphine Tourbiez
Clément Félix Barthélémy
Gaël Beaunée
Pauline Ezanno
author_sort Coralie Lupo
title Data_Sheet_1_Modeling the Transmission of Vibrio aestuarianus in Pacific Oysters Using Experimental Infection Data.docx
title_short Data_Sheet_1_Modeling the Transmission of Vibrio aestuarianus in Pacific Oysters Using Experimental Infection Data.docx
title_full Data_Sheet_1_Modeling the Transmission of Vibrio aestuarianus in Pacific Oysters Using Experimental Infection Data.docx
title_fullStr Data_Sheet_1_Modeling the Transmission of Vibrio aestuarianus in Pacific Oysters Using Experimental Infection Data.docx
title_full_unstemmed Data_Sheet_1_Modeling the Transmission of Vibrio aestuarianus in Pacific Oysters Using Experimental Infection Data.docx
title_sort data_sheet_1_modeling the transmission of vibrio aestuarianus in pacific oysters using experimental infection data.docx
publishDate 2019
url https://doi.org/10.3389/fvets.2019.00142.s001
https://figshare.com/articles/Data_Sheet_1_Modeling_the_Transmission_of_Vibrio_aestuarianus_in_Pacific_Oysters_Using_Experimental_Infection_Data_docx/8121785
geographic Pacific
geographic_facet Pacific
genre Crassostrea gigas
genre_facet Crassostrea gigas
op_relation doi:10.3389/fvets.2019.00142.s001
https://figshare.com/articles/Data_Sheet_1_Modeling_the_Transmission_of_Vibrio_aestuarianus_in_Pacific_Oysters_Using_Experimental_Infection_Data_docx/8121785
op_rights CC BY 4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.3389/fvets.2019.00142.s001
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