Image_1_Elucidating Viral Communities During a Phytoplankton Bloom on the West Antarctic Peninsula.TIFF

In Antarctic coastal waters where nutrient limitations are low, viruses are expected to play a major role in the regulation of bloom events. Despite this, research in viral identification and dynamics is scarce, with limited information available for the Southern Ocean (SO). This study presents an i...

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Main Authors: Tomás Alarcón-Schumacher, Sergio Guajardo-Leiva, Josefa Antón, Beatriz Díez
Format: Still Image
Language:unknown
Published: 2019
Subjects:
Online Access:https://doi.org/10.3389/fmicb.2019.01014.s002
https://figshare.com/articles/Image_1_Elucidating_Viral_Communities_During_a_Phytoplankton_Bloom_on_the_West_Antarctic_Peninsula_TIFF/8121602
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spelling ftfrontimediafig:oai:figshare.com:article/8121602 2023-05-15T13:38:04+02:00 Image_1_Elucidating Viral Communities During a Phytoplankton Bloom on the West Antarctic Peninsula.TIFF Tomás Alarcón-Schumacher Sergio Guajardo-Leiva Josefa Antón Beatriz Díez 2019-05-14T04:15:16Z https://doi.org/10.3389/fmicb.2019.01014.s002 https://figshare.com/articles/Image_1_Elucidating_Viral_Communities_During_a_Phytoplankton_Bloom_on_the_West_Antarctic_Peninsula_TIFF/8121602 unknown doi:10.3389/fmicb.2019.01014.s002 https://figshare.com/articles/Image_1_Elucidating_Viral_Communities_During_a_Phytoplankton_Bloom_on_the_West_Antarctic_Peninsula_TIFF/8121602 CC BY 4.0 CC-BY Microbiology Microbial Genetics Microbial Ecology Mycology phytoplankton blooms Southern Ocean viruses environmental genomics viral ecology Image Figure 2019 ftfrontimediafig https://doi.org/10.3389/fmicb.2019.01014.s002 2019-05-15T22:58:54Z In Antarctic coastal waters where nutrient limitations are low, viruses are expected to play a major role in the regulation of bloom events. Despite this, research in viral identification and dynamics is scarce, with limited information available for the Southern Ocean (SO). This study presents an integrative-omics approach, comparing variation in the viral and microbial active communities on two contrasting sample conditions from a diatom-dominated phytoplankton bloom occurring in Chile Bay in the West Antarctic Peninsula (WAP) in the summer of 2014. The known viral community, initially dominated by Myoviridae family (∼82% of the total assigned reads), changed to become dominated by Phycodnaviridae (∼90%), while viral activity was predominantly driven by dsDNA members of the Phycodnaviridae (∼50%) and diatom infecting ssRNA viruses (∼38%), becoming more significant as chlorophyll a increased. A genomic and phylogenetic characterization allowed the identification of a new viral lineage within the Myoviridae family. This new lineage of viruses infects Pseudoalteromonas and was dominant in the phage community. In addition, a new Phycodnavirus (PaV) was described, which is predicted to infect Phaeocystis antarctica, the main blooming haptophyte in the SO. This work was able to identify the changes in the main viral players during a bloom development and suggests that the changes observed in the virioplankton could be used as a model to understand the development and decay of blooms that occur throughout the WAP. Still Image Antarc* Antarctic Antarctic Peninsula Antarctica Southern Ocean Frontiers: Figshare Antarctic Southern Ocean Antarctic Peninsula
institution Open Polar
collection Frontiers: Figshare
op_collection_id ftfrontimediafig
language unknown
topic Microbiology
Microbial Genetics
Microbial Ecology
Mycology
phytoplankton blooms
Southern Ocean
viruses
environmental genomics
viral ecology
spellingShingle Microbiology
Microbial Genetics
Microbial Ecology
Mycology
phytoplankton blooms
Southern Ocean
viruses
environmental genomics
viral ecology
Tomás Alarcón-Schumacher
Sergio Guajardo-Leiva
Josefa Antón
Beatriz Díez
Image_1_Elucidating Viral Communities During a Phytoplankton Bloom on the West Antarctic Peninsula.TIFF
topic_facet Microbiology
Microbial Genetics
Microbial Ecology
Mycology
phytoplankton blooms
Southern Ocean
viruses
environmental genomics
viral ecology
description In Antarctic coastal waters where nutrient limitations are low, viruses are expected to play a major role in the regulation of bloom events. Despite this, research in viral identification and dynamics is scarce, with limited information available for the Southern Ocean (SO). This study presents an integrative-omics approach, comparing variation in the viral and microbial active communities on two contrasting sample conditions from a diatom-dominated phytoplankton bloom occurring in Chile Bay in the West Antarctic Peninsula (WAP) in the summer of 2014. The known viral community, initially dominated by Myoviridae family (∼82% of the total assigned reads), changed to become dominated by Phycodnaviridae (∼90%), while viral activity was predominantly driven by dsDNA members of the Phycodnaviridae (∼50%) and diatom infecting ssRNA viruses (∼38%), becoming more significant as chlorophyll a increased. A genomic and phylogenetic characterization allowed the identification of a new viral lineage within the Myoviridae family. This new lineage of viruses infects Pseudoalteromonas and was dominant in the phage community. In addition, a new Phycodnavirus (PaV) was described, which is predicted to infect Phaeocystis antarctica, the main blooming haptophyte in the SO. This work was able to identify the changes in the main viral players during a bloom development and suggests that the changes observed in the virioplankton could be used as a model to understand the development and decay of blooms that occur throughout the WAP.
format Still Image
author Tomás Alarcón-Schumacher
Sergio Guajardo-Leiva
Josefa Antón
Beatriz Díez
author_facet Tomás Alarcón-Schumacher
Sergio Guajardo-Leiva
Josefa Antón
Beatriz Díez
author_sort Tomás Alarcón-Schumacher
title Image_1_Elucidating Viral Communities During a Phytoplankton Bloom on the West Antarctic Peninsula.TIFF
title_short Image_1_Elucidating Viral Communities During a Phytoplankton Bloom on the West Antarctic Peninsula.TIFF
title_full Image_1_Elucidating Viral Communities During a Phytoplankton Bloom on the West Antarctic Peninsula.TIFF
title_fullStr Image_1_Elucidating Viral Communities During a Phytoplankton Bloom on the West Antarctic Peninsula.TIFF
title_full_unstemmed Image_1_Elucidating Viral Communities During a Phytoplankton Bloom on the West Antarctic Peninsula.TIFF
title_sort image_1_elucidating viral communities during a phytoplankton bloom on the west antarctic peninsula.tiff
publishDate 2019
url https://doi.org/10.3389/fmicb.2019.01014.s002
https://figshare.com/articles/Image_1_Elucidating_Viral_Communities_During_a_Phytoplankton_Bloom_on_the_West_Antarctic_Peninsula_TIFF/8121602
geographic Antarctic
Southern Ocean
Antarctic Peninsula
geographic_facet Antarctic
Southern Ocean
Antarctic Peninsula
genre Antarc*
Antarctic
Antarctic Peninsula
Antarctica
Southern Ocean
genre_facet Antarc*
Antarctic
Antarctic Peninsula
Antarctica
Southern Ocean
op_relation doi:10.3389/fmicb.2019.01014.s002
https://figshare.com/articles/Image_1_Elucidating_Viral_Communities_During_a_Phytoplankton_Bloom_on_the_West_Antarctic_Peninsula_TIFF/8121602
op_rights CC BY 4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.3389/fmicb.2019.01014.s002
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