Data_Sheet_1_Elucidating Viral Communities During a Phytoplankton Bloom on the West Antarctic Peninsula.docx

In Antarctic coastal waters where nutrient limitations are low, viruses are expected to play a major role in the regulation of bloom events. Despite this, research in viral identification and dynamics is scarce, with limited information available for the Southern Ocean (SO). This study presents an i...

Full description

Bibliographic Details
Main Authors: Tomás Alarcón-Schumacher, Sergio Guajardo-Leiva, Josefa Antón, Beatriz Díez
Format: Dataset
Language:unknown
Published: 2019
Subjects:
Online Access:https://doi.org/10.3389/fmicb.2019.01014.s001
https://figshare.com/articles/Data_Sheet_1_Elucidating_Viral_Communities_During_a_Phytoplankton_Bloom_on_the_West_Antarctic_Peninsula_docx/8121599
id ftfrontimediafig:oai:figshare.com:article/8121599
record_format openpolar
spelling ftfrontimediafig:oai:figshare.com:article/8121599 2023-05-15T13:38:04+02:00 Data_Sheet_1_Elucidating Viral Communities During a Phytoplankton Bloom on the West Antarctic Peninsula.docx Tomás Alarcón-Schumacher Sergio Guajardo-Leiva Josefa Antón Beatriz Díez 2019-05-14T04:15:16Z https://doi.org/10.3389/fmicb.2019.01014.s001 https://figshare.com/articles/Data_Sheet_1_Elucidating_Viral_Communities_During_a_Phytoplankton_Bloom_on_the_West_Antarctic_Peninsula_docx/8121599 unknown doi:10.3389/fmicb.2019.01014.s001 https://figshare.com/articles/Data_Sheet_1_Elucidating_Viral_Communities_During_a_Phytoplankton_Bloom_on_the_West_Antarctic_Peninsula_docx/8121599 CC BY 4.0 CC-BY Microbiology Microbial Genetics Microbial Ecology Mycology phytoplankton blooms Southern Ocean viruses environmental genomics viral ecology Dataset 2019 ftfrontimediafig https://doi.org/10.3389/fmicb.2019.01014.s001 2019-05-15T22:58:54Z In Antarctic coastal waters where nutrient limitations are low, viruses are expected to play a major role in the regulation of bloom events. Despite this, research in viral identification and dynamics is scarce, with limited information available for the Southern Ocean (SO). This study presents an integrative-omics approach, comparing variation in the viral and microbial active communities on two contrasting sample conditions from a diatom-dominated phytoplankton bloom occurring in Chile Bay in the West Antarctic Peninsula (WAP) in the summer of 2014. The known viral community, initially dominated by Myoviridae family (∼82% of the total assigned reads), changed to become dominated by Phycodnaviridae (∼90%), while viral activity was predominantly driven by dsDNA members of the Phycodnaviridae (∼50%) and diatom infecting ssRNA viruses (∼38%), becoming more significant as chlorophyll a increased. A genomic and phylogenetic characterization allowed the identification of a new viral lineage within the Myoviridae family. This new lineage of viruses infects Pseudoalteromonas and was dominant in the phage community. In addition, a new Phycodnavirus (PaV) was described, which is predicted to infect Phaeocystis antarctica, the main blooming haptophyte in the SO. This work was able to identify the changes in the main viral players during a bloom development and suggests that the changes observed in the virioplankton could be used as a model to understand the development and decay of blooms that occur throughout the WAP. Dataset Antarc* Antarctic Antarctic Peninsula Antarctica Southern Ocean Frontiers: Figshare Antarctic Antarctic Peninsula Southern Ocean
institution Open Polar
collection Frontiers: Figshare
op_collection_id ftfrontimediafig
language unknown
topic Microbiology
Microbial Genetics
Microbial Ecology
Mycology
phytoplankton blooms
Southern Ocean
viruses
environmental genomics
viral ecology
spellingShingle Microbiology
Microbial Genetics
Microbial Ecology
Mycology
phytoplankton blooms
Southern Ocean
viruses
environmental genomics
viral ecology
Tomás Alarcón-Schumacher
Sergio Guajardo-Leiva
Josefa Antón
Beatriz Díez
Data_Sheet_1_Elucidating Viral Communities During a Phytoplankton Bloom on the West Antarctic Peninsula.docx
topic_facet Microbiology
Microbial Genetics
Microbial Ecology
Mycology
phytoplankton blooms
Southern Ocean
viruses
environmental genomics
viral ecology
description In Antarctic coastal waters where nutrient limitations are low, viruses are expected to play a major role in the regulation of bloom events. Despite this, research in viral identification and dynamics is scarce, with limited information available for the Southern Ocean (SO). This study presents an integrative-omics approach, comparing variation in the viral and microbial active communities on two contrasting sample conditions from a diatom-dominated phytoplankton bloom occurring in Chile Bay in the West Antarctic Peninsula (WAP) in the summer of 2014. The known viral community, initially dominated by Myoviridae family (∼82% of the total assigned reads), changed to become dominated by Phycodnaviridae (∼90%), while viral activity was predominantly driven by dsDNA members of the Phycodnaviridae (∼50%) and diatom infecting ssRNA viruses (∼38%), becoming more significant as chlorophyll a increased. A genomic and phylogenetic characterization allowed the identification of a new viral lineage within the Myoviridae family. This new lineage of viruses infects Pseudoalteromonas and was dominant in the phage community. In addition, a new Phycodnavirus (PaV) was described, which is predicted to infect Phaeocystis antarctica, the main blooming haptophyte in the SO. This work was able to identify the changes in the main viral players during a bloom development and suggests that the changes observed in the virioplankton could be used as a model to understand the development and decay of blooms that occur throughout the WAP.
format Dataset
author Tomás Alarcón-Schumacher
Sergio Guajardo-Leiva
Josefa Antón
Beatriz Díez
author_facet Tomás Alarcón-Schumacher
Sergio Guajardo-Leiva
Josefa Antón
Beatriz Díez
author_sort Tomás Alarcón-Schumacher
title Data_Sheet_1_Elucidating Viral Communities During a Phytoplankton Bloom on the West Antarctic Peninsula.docx
title_short Data_Sheet_1_Elucidating Viral Communities During a Phytoplankton Bloom on the West Antarctic Peninsula.docx
title_full Data_Sheet_1_Elucidating Viral Communities During a Phytoplankton Bloom on the West Antarctic Peninsula.docx
title_fullStr Data_Sheet_1_Elucidating Viral Communities During a Phytoplankton Bloom on the West Antarctic Peninsula.docx
title_full_unstemmed Data_Sheet_1_Elucidating Viral Communities During a Phytoplankton Bloom on the West Antarctic Peninsula.docx
title_sort data_sheet_1_elucidating viral communities during a phytoplankton bloom on the west antarctic peninsula.docx
publishDate 2019
url https://doi.org/10.3389/fmicb.2019.01014.s001
https://figshare.com/articles/Data_Sheet_1_Elucidating_Viral_Communities_During_a_Phytoplankton_Bloom_on_the_West_Antarctic_Peninsula_docx/8121599
geographic Antarctic
Antarctic Peninsula
Southern Ocean
geographic_facet Antarctic
Antarctic Peninsula
Southern Ocean
genre Antarc*
Antarctic
Antarctic Peninsula
Antarctica
Southern Ocean
genre_facet Antarc*
Antarctic
Antarctic Peninsula
Antarctica
Southern Ocean
op_relation doi:10.3389/fmicb.2019.01014.s001
https://figshare.com/articles/Data_Sheet_1_Elucidating_Viral_Communities_During_a_Phytoplankton_Bloom_on_the_West_Antarctic_Peninsula_docx/8121599
op_rights CC BY 4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.3389/fmicb.2019.01014.s001
_version_ 1766101277422387200