Data_Sheet_1_Biogeography of Cyanobacterial isiA Genes and Their Link to Iron Availability in the Ocean.xlsx

The cyanobacterial iron-stress-inducible isiA gene encodes a chlorophyll-binding protein that provides flexibility in photosynthetic strategy enabling cells to acclimate to low iron availability. Here, we report on the diversity and abundance of isiA genes from 14 oceanic stations encompassing large...

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Main Authors: Qian Li, Jef Huisman, Thomas S. Bibby, Nianzhi Jiao
Format: Dataset
Language:unknown
Published: 2019
Subjects:
Online Access:https://doi.org/10.3389/fmicb.2019.00650.s001
https://figshare.com/articles/Data_Sheet_1_Biogeography_of_Cyanobacterial_isiA_Genes_and_Their_Link_to_Iron_Availability_in_the_Ocean_xlsx/7950053
id ftfrontimediafig:oai:figshare.com:article/7950053
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spelling ftfrontimediafig:oai:figshare.com:article/7950053 2023-05-15T17:34:23+02:00 Data_Sheet_1_Biogeography of Cyanobacterial isiA Genes and Their Link to Iron Availability in the Ocean.xlsx Qian Li Jef Huisman Thomas S. Bibby Nianzhi Jiao 2019-04-04T04:27:07Z https://doi.org/10.3389/fmicb.2019.00650.s001 https://figshare.com/articles/Data_Sheet_1_Biogeography_of_Cyanobacterial_isiA_Genes_and_Their_Link_to_Iron_Availability_in_the_Ocean_xlsx/7950053 unknown doi:10.3389/fmicb.2019.00650.s001 https://figshare.com/articles/Data_Sheet_1_Biogeography_of_Cyanobacterial_isiA_Genes_and_Their_Link_to_Iron_Availability_in_the_Ocean_xlsx/7950053 CC BY 4.0 CC-BY Microbiology Microbial Genetics Microbial Ecology Mycology cyanobacteria Synechococcus iron limitation antenna protein isiA chlorophyll Dataset 2019 ftfrontimediafig https://doi.org/10.3389/fmicb.2019.00650.s001 2019-04-10T23:00:07Z The cyanobacterial iron-stress-inducible isiA gene encodes a chlorophyll-binding protein that provides flexibility in photosynthetic strategy enabling cells to acclimate to low iron availability. Here, we report on the diversity and abundance of isiA genes from 14 oceanic stations encompassing large natural gradients in iron availability. Synechococcus CRD1 and CRD2-like isiA genes were ubiquitously identified from tropical and subtropical waters of the Pacific, Atlantic, and Indian Oceans. The relative abundance of isiA-containing Synechococcus cells ranged from less than 10% of the total Synechococcus population in regions where iron is replete such as the North Atlantic subtropical gyre, to over 80% in low-iron but high-nitrate regions of the eastern equatorial Pacific. Interestingly, Synechococcus populations in regions with both low iron and low nitrate concentrations such as the subtropical gyres in the North Pacific and South Atlantic had a low relative abundance of the isiA gene. Indeed, fitting our data into a multiple regression model showed that ∼80% of the variation in isiA relative abundances can be explained by nitrate and iron concentrations, whereas no other environmental variables (temperature, salinity, Chl a) had a significant effect. Hence, isiA has a predictable biogeographical distribution, consistent with the perceived biological role of IsiA as an adaptation to low-iron conditions. Understanding such photosynthetic strategies is critical to our ability to accurately estimate primary production and map nutrient limitation on global scales. Dataset North Atlantic Frontiers: Figshare Pacific Indian
institution Open Polar
collection Frontiers: Figshare
op_collection_id ftfrontimediafig
language unknown
topic Microbiology
Microbial Genetics
Microbial Ecology
Mycology
cyanobacteria
Synechococcus
iron limitation
antenna protein
isiA
chlorophyll
spellingShingle Microbiology
Microbial Genetics
Microbial Ecology
Mycology
cyanobacteria
Synechococcus
iron limitation
antenna protein
isiA
chlorophyll
Qian Li
Jef Huisman
Thomas S. Bibby
Nianzhi Jiao
Data_Sheet_1_Biogeography of Cyanobacterial isiA Genes and Their Link to Iron Availability in the Ocean.xlsx
topic_facet Microbiology
Microbial Genetics
Microbial Ecology
Mycology
cyanobacteria
Synechococcus
iron limitation
antenna protein
isiA
chlorophyll
description The cyanobacterial iron-stress-inducible isiA gene encodes a chlorophyll-binding protein that provides flexibility in photosynthetic strategy enabling cells to acclimate to low iron availability. Here, we report on the diversity and abundance of isiA genes from 14 oceanic stations encompassing large natural gradients in iron availability. Synechococcus CRD1 and CRD2-like isiA genes were ubiquitously identified from tropical and subtropical waters of the Pacific, Atlantic, and Indian Oceans. The relative abundance of isiA-containing Synechococcus cells ranged from less than 10% of the total Synechococcus population in regions where iron is replete such as the North Atlantic subtropical gyre, to over 80% in low-iron but high-nitrate regions of the eastern equatorial Pacific. Interestingly, Synechococcus populations in regions with both low iron and low nitrate concentrations such as the subtropical gyres in the North Pacific and South Atlantic had a low relative abundance of the isiA gene. Indeed, fitting our data into a multiple regression model showed that ∼80% of the variation in isiA relative abundances can be explained by nitrate and iron concentrations, whereas no other environmental variables (temperature, salinity, Chl a) had a significant effect. Hence, isiA has a predictable biogeographical distribution, consistent with the perceived biological role of IsiA as an adaptation to low-iron conditions. Understanding such photosynthetic strategies is critical to our ability to accurately estimate primary production and map nutrient limitation on global scales.
format Dataset
author Qian Li
Jef Huisman
Thomas S. Bibby
Nianzhi Jiao
author_facet Qian Li
Jef Huisman
Thomas S. Bibby
Nianzhi Jiao
author_sort Qian Li
title Data_Sheet_1_Biogeography of Cyanobacterial isiA Genes and Their Link to Iron Availability in the Ocean.xlsx
title_short Data_Sheet_1_Biogeography of Cyanobacterial isiA Genes and Their Link to Iron Availability in the Ocean.xlsx
title_full Data_Sheet_1_Biogeography of Cyanobacterial isiA Genes and Their Link to Iron Availability in the Ocean.xlsx
title_fullStr Data_Sheet_1_Biogeography of Cyanobacterial isiA Genes and Their Link to Iron Availability in the Ocean.xlsx
title_full_unstemmed Data_Sheet_1_Biogeography of Cyanobacterial isiA Genes and Their Link to Iron Availability in the Ocean.xlsx
title_sort data_sheet_1_biogeography of cyanobacterial isia genes and their link to iron availability in the ocean.xlsx
publishDate 2019
url https://doi.org/10.3389/fmicb.2019.00650.s001
https://figshare.com/articles/Data_Sheet_1_Biogeography_of_Cyanobacterial_isiA_Genes_and_Their_Link_to_Iron_Availability_in_the_Ocean_xlsx/7950053
geographic Pacific
Indian
geographic_facet Pacific
Indian
genre North Atlantic
genre_facet North Atlantic
op_relation doi:10.3389/fmicb.2019.00650.s001
https://figshare.com/articles/Data_Sheet_1_Biogeography_of_Cyanobacterial_isiA_Genes_and_Their_Link_to_Iron_Availability_in_the_Ocean_xlsx/7950053
op_rights CC BY 4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.3389/fmicb.2019.00650.s001
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