Data_Sheet_1_Multiple Strategies for Light-Harvesting, Photoprotection, and Carbon Flow in High Latitude Microbial Mats.docx

Microbial mats are ubiquitous in polar freshwater ecosystems and sustain high concentrations of biomass despite the extreme seasonal variations in light and temperature. Here we aimed to resolve genomic adaptations for light-harvesting, bright-light protection, and carbon flow in mats that undergo s...

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Bibliographic Details
Main Authors: Adrien Vigneron, Perrine Cruaud, Vani Mohit, Marie-Josée Martineau, Alexander I. Culley, Connie Lovejoy, Warwick F. Vincent
Format: Dataset
Language:unknown
Published: 2018
Subjects:
Microbiology
Microbial Genetics
Microbial Ecology
Mycology
Arctic
microbiome
cyanobacteria
rhodopsin
pigment
biofilm
permafrost
Online Access:https://doi.org/10.3389/fmicb.2018.02881.s001
https://figshare.com/articles/Data_Sheet_1_Multiple_Strategies_for_Light-Harvesting_Photoprotection_and_Carbon_Flow_in_High_Latitude_Microbial_Mats_docx/7413806
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Summary:Microbial mats are ubiquitous in polar freshwater ecosystems and sustain high concentrations of biomass despite the extreme seasonal variations in light and temperature. Here we aimed to resolve genomic adaptations for light-harvesting, bright-light protection, and carbon flow in mats that undergo seasonal freeze-up. To bracket a range of communities in shallow water habitats, we sampled cyanobacterial mats in the thawed littoral zone of two lakes situated at the northern and southern limits of the Canadian Arctic permafrost zone. We applied a multiphasic approach using pigment profiles from high performance liquid chromatography, Illumina MiSeq sequencing of the 16S and 18S rRNA genes, and metagenomic analysis. The mats shared a taxonomic and functional core microbiome, dominated by oxygenic cyanobacteria with light-harvesting and photoprotective pigments, bacteria with bacteriochlorophyll, and bacteria with light-driven Type I rhodopsins. Organisms able to use light for energy related processes represented up to 85% of the total microbial community, with 15–30% attributable to cyanobacteria and 55–70% attributable to other bacteria. The proportion of genes involved in anaplerotic CO 2 fixation was greater than for genes associated with oxygenic photosynthesis. Diverse heterotrophic bacteria, eukaryotes (including metazoans and fungi) and viruses co-occurred in both communities. The results indicate a broad range of strategies for capturing sunlight and CO 2 , and for the subsequent flow of energy and carbon in these complex, light-driven microbial ecosystems.

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