Table_1_Microbial community composition of terrestrial habitats in East Antarctica with a focus on microphototrophs.xlsx
The Antarctic terrestrial environment harbors a diverse community of microorganisms, which have adapted to the extreme conditions. The aim of this study was to describe the composition of microbial communities in a diverse range of terrestrial environments (various biocrusts and soils, sands from ep...
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ftfrontimediafig:oai:figshare.com:article/24946878 2024-09-15T17:47:39+00:00 Table_1_Microbial community composition of terrestrial habitats in East Antarctica with a focus on microphototrophs.xlsx Ekaterina Pushkareva Josef Elster Sakae Kudoh Satoshi Imura Burkhard Becker 2024-01-05T04:47:34Z https://doi.org/10.3389/fmicb.2023.1323148.s002 https://figshare.com/articles/dataset/Table_1_Microbial_community_composition_of_terrestrial_habitats_in_East_Antarctica_with_a_focus_on_microphototrophs_xlsx/24946878 unknown doi:10.3389/fmicb.2023.1323148.s002 https://figshare.com/articles/dataset/Table_1_Microbial_community_composition_of_terrestrial_habitats_in_East_Antarctica_with_a_focus_on_microphototrophs_xlsx/24946878 CC BY 4.0 Microbiology Microbial Genetics Microbial Ecology Mycology East Antarctica terrestrial environment amplicon sequencing cyanobacteria eukaryotic microalgae Dataset 2024 ftfrontimediafig https://doi.org/10.3389/fmicb.2023.1323148.s002 2024-08-19T06:19:47Z The Antarctic terrestrial environment harbors a diverse community of microorganisms, which have adapted to the extreme conditions. The aim of this study was to describe the composition of microbial communities in a diverse range of terrestrial environments (various biocrusts and soils, sands from ephemeral wetlands, biofilms, endolithic and hypolithic communities) in East Antarctica using both molecular and morphological approaches. Amplicon sequencing of the 16S rRNA gene revealed the dominance of Chloroflexi, Cyanobacteria and Firmicutes, while sequencing of the 18S rRNA gene showed the prevalence of Alveolata, Chloroplastida, Metazoa, and Rhizaria. This study also provided a comprehensive assessment of the microphototrophic community revealing a diversity of cyanobacteria and eukaryotic microalgae in various Antarctic terrestrial samples. Filamentous cyanobacteria belonging to the orders Oscillatoriales and Pseudanabaenales dominated prokaryotic community, while members of Trebouxiophyceae were the most abundant representatives of eukaryotes. In addition, the co-occurrence analysis showed a prevalence of positive correlations with bacterial taxa frequently co-occurring together. Dataset Antarc* Antarctic Antarctica East Antarctica Frontiers: Figshare |
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Open Polar |
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Frontiers: Figshare |
op_collection_id |
ftfrontimediafig |
language |
unknown |
topic |
Microbiology Microbial Genetics Microbial Ecology Mycology East Antarctica terrestrial environment amplicon sequencing cyanobacteria eukaryotic microalgae |
spellingShingle |
Microbiology Microbial Genetics Microbial Ecology Mycology East Antarctica terrestrial environment amplicon sequencing cyanobacteria eukaryotic microalgae Ekaterina Pushkareva Josef Elster Sakae Kudoh Satoshi Imura Burkhard Becker Table_1_Microbial community composition of terrestrial habitats in East Antarctica with a focus on microphototrophs.xlsx |
topic_facet |
Microbiology Microbial Genetics Microbial Ecology Mycology East Antarctica terrestrial environment amplicon sequencing cyanobacteria eukaryotic microalgae |
description |
The Antarctic terrestrial environment harbors a diverse community of microorganisms, which have adapted to the extreme conditions. The aim of this study was to describe the composition of microbial communities in a diverse range of terrestrial environments (various biocrusts and soils, sands from ephemeral wetlands, biofilms, endolithic and hypolithic communities) in East Antarctica using both molecular and morphological approaches. Amplicon sequencing of the 16S rRNA gene revealed the dominance of Chloroflexi, Cyanobacteria and Firmicutes, while sequencing of the 18S rRNA gene showed the prevalence of Alveolata, Chloroplastida, Metazoa, and Rhizaria. This study also provided a comprehensive assessment of the microphototrophic community revealing a diversity of cyanobacteria and eukaryotic microalgae in various Antarctic terrestrial samples. Filamentous cyanobacteria belonging to the orders Oscillatoriales and Pseudanabaenales dominated prokaryotic community, while members of Trebouxiophyceae were the most abundant representatives of eukaryotes. In addition, the co-occurrence analysis showed a prevalence of positive correlations with bacterial taxa frequently co-occurring together. |
format |
Dataset |
author |
Ekaterina Pushkareva Josef Elster Sakae Kudoh Satoshi Imura Burkhard Becker |
author_facet |
Ekaterina Pushkareva Josef Elster Sakae Kudoh Satoshi Imura Burkhard Becker |
author_sort |
Ekaterina Pushkareva |
title |
Table_1_Microbial community composition of terrestrial habitats in East Antarctica with a focus on microphototrophs.xlsx |
title_short |
Table_1_Microbial community composition of terrestrial habitats in East Antarctica with a focus on microphototrophs.xlsx |
title_full |
Table_1_Microbial community composition of terrestrial habitats in East Antarctica with a focus on microphototrophs.xlsx |
title_fullStr |
Table_1_Microbial community composition of terrestrial habitats in East Antarctica with a focus on microphototrophs.xlsx |
title_full_unstemmed |
Table_1_Microbial community composition of terrestrial habitats in East Antarctica with a focus on microphototrophs.xlsx |
title_sort |
table_1_microbial community composition of terrestrial habitats in east antarctica with a focus on microphototrophs.xlsx |
publishDate |
2024 |
url |
https://doi.org/10.3389/fmicb.2023.1323148.s002 https://figshare.com/articles/dataset/Table_1_Microbial_community_composition_of_terrestrial_habitats_in_East_Antarctica_with_a_focus_on_microphototrophs_xlsx/24946878 |
genre |
Antarc* Antarctic Antarctica East Antarctica |
genre_facet |
Antarc* Antarctic Antarctica East Antarctica |
op_relation |
doi:10.3389/fmicb.2023.1323148.s002 https://figshare.com/articles/dataset/Table_1_Microbial_community_composition_of_terrestrial_habitats_in_East_Antarctica_with_a_focus_on_microphototrophs_xlsx/24946878 |
op_rights |
CC BY 4.0 |
op_doi |
https://doi.org/10.3389/fmicb.2023.1323148.s002 |
_version_ |
1810497119523438592 |