Data_Sheet_1_Microbial community composition of terrestrial habitats in East Antarctica with a focus on microphototrophs.docx

The Antarctic terrestrial environment harbors a diverse community of microorganisms, which have adapted to the extreme conditions. The aim of this study was to describe the composition of microbial communities in a diverse range of terrestrial environments (various biocrusts and soils, sands from ep...

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Main Authors: Ekaterina Pushkareva, Josef Elster, Sakae Kudoh, Satoshi Imura, Burkhard Becker
Format: Dataset
Language:unknown
Published: 2024
Subjects:
Online Access:https://doi.org/10.3389/fmicb.2023.1323148.s001
https://figshare.com/articles/dataset/Data_Sheet_1_Microbial_community_composition_of_terrestrial_habitats_in_East_Antarctica_with_a_focus_on_microphototrophs_docx/24946869
id ftfrontimediafig:oai:figshare.com:article/24946869
record_format openpolar
spelling ftfrontimediafig:oai:figshare.com:article/24946869 2024-09-15T17:47:39+00:00 Data_Sheet_1_Microbial community composition of terrestrial habitats in East Antarctica with a focus on microphototrophs.docx Ekaterina Pushkareva Josef Elster Sakae Kudoh Satoshi Imura Burkhard Becker 2024-01-05T04:47:34Z https://doi.org/10.3389/fmicb.2023.1323148.s001 https://figshare.com/articles/dataset/Data_Sheet_1_Microbial_community_composition_of_terrestrial_habitats_in_East_Antarctica_with_a_focus_on_microphototrophs_docx/24946869 unknown doi:10.3389/fmicb.2023.1323148.s001 https://figshare.com/articles/dataset/Data_Sheet_1_Microbial_community_composition_of_terrestrial_habitats_in_East_Antarctica_with_a_focus_on_microphototrophs_docx/24946869 CC BY 4.0 Microbiology Microbial Genetics Microbial Ecology Mycology East Antarctica terrestrial environment amplicon sequencing cyanobacteria eukaryotic microalgae Dataset 2024 ftfrontimediafig https://doi.org/10.3389/fmicb.2023.1323148.s001 2024-08-19T06:19:47Z The Antarctic terrestrial environment harbors a diverse community of microorganisms, which have adapted to the extreme conditions. The aim of this study was to describe the composition of microbial communities in a diverse range of terrestrial environments (various biocrusts and soils, sands from ephemeral wetlands, biofilms, endolithic and hypolithic communities) in East Antarctica using both molecular and morphological approaches. Amplicon sequencing of the 16S rRNA gene revealed the dominance of Chloroflexi, Cyanobacteria and Firmicutes, while sequencing of the 18S rRNA gene showed the prevalence of Alveolata, Chloroplastida, Metazoa, and Rhizaria. This study also provided a comprehensive assessment of the microphototrophic community revealing a diversity of cyanobacteria and eukaryotic microalgae in various Antarctic terrestrial samples. Filamentous cyanobacteria belonging to the orders Oscillatoriales and Pseudanabaenales dominated prokaryotic community, while members of Trebouxiophyceae were the most abundant representatives of eukaryotes. In addition, the co-occurrence analysis showed a prevalence of positive correlations with bacterial taxa frequently co-occurring together. Dataset Antarc* Antarctic Antarctica East Antarctica Frontiers: Figshare
institution Open Polar
collection Frontiers: Figshare
op_collection_id ftfrontimediafig
language unknown
topic Microbiology
Microbial Genetics
Microbial Ecology
Mycology
East Antarctica
terrestrial environment
amplicon sequencing
cyanobacteria
eukaryotic microalgae
spellingShingle Microbiology
Microbial Genetics
Microbial Ecology
Mycology
East Antarctica
terrestrial environment
amplicon sequencing
cyanobacteria
eukaryotic microalgae
Ekaterina Pushkareva
Josef Elster
Sakae Kudoh
Satoshi Imura
Burkhard Becker
Data_Sheet_1_Microbial community composition of terrestrial habitats in East Antarctica with a focus on microphototrophs.docx
topic_facet Microbiology
Microbial Genetics
Microbial Ecology
Mycology
East Antarctica
terrestrial environment
amplicon sequencing
cyanobacteria
eukaryotic microalgae
description The Antarctic terrestrial environment harbors a diverse community of microorganisms, which have adapted to the extreme conditions. The aim of this study was to describe the composition of microbial communities in a diverse range of terrestrial environments (various biocrusts and soils, sands from ephemeral wetlands, biofilms, endolithic and hypolithic communities) in East Antarctica using both molecular and morphological approaches. Amplicon sequencing of the 16S rRNA gene revealed the dominance of Chloroflexi, Cyanobacteria and Firmicutes, while sequencing of the 18S rRNA gene showed the prevalence of Alveolata, Chloroplastida, Metazoa, and Rhizaria. This study also provided a comprehensive assessment of the microphototrophic community revealing a diversity of cyanobacteria and eukaryotic microalgae in various Antarctic terrestrial samples. Filamentous cyanobacteria belonging to the orders Oscillatoriales and Pseudanabaenales dominated prokaryotic community, while members of Trebouxiophyceae were the most abundant representatives of eukaryotes. In addition, the co-occurrence analysis showed a prevalence of positive correlations with bacterial taxa frequently co-occurring together.
format Dataset
author Ekaterina Pushkareva
Josef Elster
Sakae Kudoh
Satoshi Imura
Burkhard Becker
author_facet Ekaterina Pushkareva
Josef Elster
Sakae Kudoh
Satoshi Imura
Burkhard Becker
author_sort Ekaterina Pushkareva
title Data_Sheet_1_Microbial community composition of terrestrial habitats in East Antarctica with a focus on microphototrophs.docx
title_short Data_Sheet_1_Microbial community composition of terrestrial habitats in East Antarctica with a focus on microphototrophs.docx
title_full Data_Sheet_1_Microbial community composition of terrestrial habitats in East Antarctica with a focus on microphototrophs.docx
title_fullStr Data_Sheet_1_Microbial community composition of terrestrial habitats in East Antarctica with a focus on microphototrophs.docx
title_full_unstemmed Data_Sheet_1_Microbial community composition of terrestrial habitats in East Antarctica with a focus on microphototrophs.docx
title_sort data_sheet_1_microbial community composition of terrestrial habitats in east antarctica with a focus on microphototrophs.docx
publishDate 2024
url https://doi.org/10.3389/fmicb.2023.1323148.s001
https://figshare.com/articles/dataset/Data_Sheet_1_Microbial_community_composition_of_terrestrial_habitats_in_East_Antarctica_with_a_focus_on_microphototrophs_docx/24946869
genre Antarc*
Antarctic
Antarctica
East Antarctica
genre_facet Antarc*
Antarctic
Antarctica
East Antarctica
op_relation doi:10.3389/fmicb.2023.1323148.s001
https://figshare.com/articles/dataset/Data_Sheet_1_Microbial_community_composition_of_terrestrial_habitats_in_East_Antarctica_with_a_focus_on_microphototrophs_docx/24946869
op_rights CC BY 4.0
op_doi https://doi.org/10.3389/fmicb.2023.1323148.s001
_version_ 1810497119699599360