Data_Sheet_1_Diversity of RNA viruses of three dominant tick species in North China.docx
Background A wide range of bacterial pathogens have been identified in ticks, yet the diversity of viruses in ticks is largely unexplored. Methods Here, we used metagenomic sequencing to characterize the diverse viromes in three principal tick species associated with pathogens, Haemaphysalis concinn...
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ftfrontimediafig:oai:figshare.com:article/21895260 2023-05-15T18:31:03+02:00 Data_Sheet_1_Diversity of RNA viruses of three dominant tick species in North China.docx Tong Qin Mingjie Shi Meina Zhang Zhitong Liu Hao Feng Yi Sun 2023-01-13T05:10:40Z https://doi.org/10.3389/fvets.2022.1057977.s001 https://figshare.com/articles/dataset/Data_Sheet_1_Diversity_of_RNA_viruses_of_three_dominant_tick_species_in_North_China_docx/21895260 unknown doi:10.3389/fvets.2022.1057977.s001 https://figshare.com/articles/dataset/Data_Sheet_1_Diversity_of_RNA_viruses_of_three_dominant_tick_species_in_North_China_docx/21895260 CC BY 4.0 CC-BY Animal Systematics and Taxonomy Animal Physiology - Biophysics Animal Physiology - Cell Animal Physiology - Systems Animal Behaviour Animal Cell and Molecular Biology Animal Developmental and Reproductive Biology Animal Immunology Animal Neurobiology Animal Physiological Ecology Animal Structure and Function Veterinary Anaesthesiology and Intensive Care Veterinary Anatomy and Physiology Veterinary Diagnosis and Diagnostics Veterinary Epidemiology Veterinary Immunology Veterinary Medicine Veterinary Microbiology (excl. Virology) Veterinary Parasitology Veterinary Pathology Veterinary Pharmacology Veterinary Surgery Veterinary Virology Veterinary Sciences not elsewhere classified virome diversity high-throughput sequencing Ixodidae China Dataset 2023 ftfrontimediafig https://doi.org/10.3389/fvets.2022.1057977.s001 2023-01-19T00:11:14Z Background A wide range of bacterial pathogens have been identified in ticks, yet the diversity of viruses in ticks is largely unexplored. Methods Here, we used metagenomic sequencing to characterize the diverse viromes in three principal tick species associated with pathogens, Haemaphysalis concinna, Dermacentor silvarum, and Ixodes persulcatus, in North China. Results A total of 28 RNA viruses were identified and belonged to more than 12 viral families, including single-stranded positive-sense RNA viruses (Flaviviridae, Picornaviridae, Luteoviridae, Solemoviridae, and Tetraviridae), negative-sense RNA viruses (Mononegavirales, Bunyavirales, and others) and double-stranded RNA viruses (Totiviridae and Partitiviridae). Of these, Dermacentor pestivirus-likevirus, Chimay-like rhabdovirus, taiga tick nigecruvirus, and Mukawa virus are presented as novel viral species, while Nuomin virus, Scapularis ixovirus, Sara tick-borne phlebovirus, Tacheng uukuvirus, and Beiji orthonairovirus had been established as human pathogens with undetermined natural circulation and pathogenicity. Other viruses include Norway mononegavirus 1, Jilin partitivirus, tick-borne tetravirus, Pico-like virus, Luteo-like virus 2, Luteo-likevirus 3, Vovk virus, Levivirus, Toti-like virus, and Solemo-like virus as well as others with unknown pathogenicity to humans and wild animals. Conclusion In conclusion, extensive virus diversity frequently occurs in Mononegavirales and Bunyavirales among the three tick species. Comparatively, I. persulcatus ticks had been demonstrated as such a kind of host with a significantly higher diversity of viral species than those of H. concinna and D. silvarum ticks. Our analysis supported that ticks are reservoirs for a wide range of viruses and suggested that the discovery and characterization of tick-borne viruses would have implications for viral taxonomy and provide insights into tick-transmitted viral zoonotic diseases. Dataset taiga Frontiers: Figshare Norway |
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Frontiers: Figshare |
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Animal Systematics and Taxonomy Animal Physiology - Biophysics Animal Physiology - Cell Animal Physiology - Systems Animal Behaviour Animal Cell and Molecular Biology Animal Developmental and Reproductive Biology Animal Immunology Animal Neurobiology Animal Physiological Ecology Animal Structure and Function Veterinary Anaesthesiology and Intensive Care Veterinary Anatomy and Physiology Veterinary Diagnosis and Diagnostics Veterinary Epidemiology Veterinary Immunology Veterinary Medicine Veterinary Microbiology (excl. Virology) Veterinary Parasitology Veterinary Pathology Veterinary Pharmacology Veterinary Surgery Veterinary Virology Veterinary Sciences not elsewhere classified virome diversity high-throughput sequencing Ixodidae China |
spellingShingle |
Animal Systematics and Taxonomy Animal Physiology - Biophysics Animal Physiology - Cell Animal Physiology - Systems Animal Behaviour Animal Cell and Molecular Biology Animal Developmental and Reproductive Biology Animal Immunology Animal Neurobiology Animal Physiological Ecology Animal Structure and Function Veterinary Anaesthesiology and Intensive Care Veterinary Anatomy and Physiology Veterinary Diagnosis and Diagnostics Veterinary Epidemiology Veterinary Immunology Veterinary Medicine Veterinary Microbiology (excl. Virology) Veterinary Parasitology Veterinary Pathology Veterinary Pharmacology Veterinary Surgery Veterinary Virology Veterinary Sciences not elsewhere classified virome diversity high-throughput sequencing Ixodidae China Tong Qin Mingjie Shi Meina Zhang Zhitong Liu Hao Feng Yi Sun Data_Sheet_1_Diversity of RNA viruses of three dominant tick species in North China.docx |
topic_facet |
Animal Systematics and Taxonomy Animal Physiology - Biophysics Animal Physiology - Cell Animal Physiology - Systems Animal Behaviour Animal Cell and Molecular Biology Animal Developmental and Reproductive Biology Animal Immunology Animal Neurobiology Animal Physiological Ecology Animal Structure and Function Veterinary Anaesthesiology and Intensive Care Veterinary Anatomy and Physiology Veterinary Diagnosis and Diagnostics Veterinary Epidemiology Veterinary Immunology Veterinary Medicine Veterinary Microbiology (excl. Virology) Veterinary Parasitology Veterinary Pathology Veterinary Pharmacology Veterinary Surgery Veterinary Virology Veterinary Sciences not elsewhere classified virome diversity high-throughput sequencing Ixodidae China |
description |
Background A wide range of bacterial pathogens have been identified in ticks, yet the diversity of viruses in ticks is largely unexplored. Methods Here, we used metagenomic sequencing to characterize the diverse viromes in three principal tick species associated with pathogens, Haemaphysalis concinna, Dermacentor silvarum, and Ixodes persulcatus, in North China. Results A total of 28 RNA viruses were identified and belonged to more than 12 viral families, including single-stranded positive-sense RNA viruses (Flaviviridae, Picornaviridae, Luteoviridae, Solemoviridae, and Tetraviridae), negative-sense RNA viruses (Mononegavirales, Bunyavirales, and others) and double-stranded RNA viruses (Totiviridae and Partitiviridae). Of these, Dermacentor pestivirus-likevirus, Chimay-like rhabdovirus, taiga tick nigecruvirus, and Mukawa virus are presented as novel viral species, while Nuomin virus, Scapularis ixovirus, Sara tick-borne phlebovirus, Tacheng uukuvirus, and Beiji orthonairovirus had been established as human pathogens with undetermined natural circulation and pathogenicity. Other viruses include Norway mononegavirus 1, Jilin partitivirus, tick-borne tetravirus, Pico-like virus, Luteo-like virus 2, Luteo-likevirus 3, Vovk virus, Levivirus, Toti-like virus, and Solemo-like virus as well as others with unknown pathogenicity to humans and wild animals. Conclusion In conclusion, extensive virus diversity frequently occurs in Mononegavirales and Bunyavirales among the three tick species. Comparatively, I. persulcatus ticks had been demonstrated as such a kind of host with a significantly higher diversity of viral species than those of H. concinna and D. silvarum ticks. Our analysis supported that ticks are reservoirs for a wide range of viruses and suggested that the discovery and characterization of tick-borne viruses would have implications for viral taxonomy and provide insights into tick-transmitted viral zoonotic diseases. |
format |
Dataset |
author |
Tong Qin Mingjie Shi Meina Zhang Zhitong Liu Hao Feng Yi Sun |
author_facet |
Tong Qin Mingjie Shi Meina Zhang Zhitong Liu Hao Feng Yi Sun |
author_sort |
Tong Qin |
title |
Data_Sheet_1_Diversity of RNA viruses of three dominant tick species in North China.docx |
title_short |
Data_Sheet_1_Diversity of RNA viruses of three dominant tick species in North China.docx |
title_full |
Data_Sheet_1_Diversity of RNA viruses of three dominant tick species in North China.docx |
title_fullStr |
Data_Sheet_1_Diversity of RNA viruses of three dominant tick species in North China.docx |
title_full_unstemmed |
Data_Sheet_1_Diversity of RNA viruses of three dominant tick species in North China.docx |
title_sort |
data_sheet_1_diversity of rna viruses of three dominant tick species in north china.docx |
publishDate |
2023 |
url |
https://doi.org/10.3389/fvets.2022.1057977.s001 https://figshare.com/articles/dataset/Data_Sheet_1_Diversity_of_RNA_viruses_of_three_dominant_tick_species_in_North_China_docx/21895260 |
geographic |
Norway |
geographic_facet |
Norway |
genre |
taiga |
genre_facet |
taiga |
op_relation |
doi:10.3389/fvets.2022.1057977.s001 https://figshare.com/articles/dataset/Data_Sheet_1_Diversity_of_RNA_viruses_of_three_dominant_tick_species_in_North_China_docx/21895260 |
op_rights |
CC BY 4.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.3389/fvets.2022.1057977.s001 |
_version_ |
1766214702976729088 |