Table_1_The spatial distribution and biogeochemical drivers of nitrogen cycle genes in an Antarctic desert.XLSX

Antarctic deserts, such as the McMurdo Dry Valleys (MDV), represent extremely cold and dry environments. Consequently, MDV are suitable for studying the environment limits on the cycling of key elements that are necessary for life, like nitrogen. The spatial distribution and biogeochemical drivers o...

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Main Authors: Francisco Pascoal, Inês Areosa, Luís Torgo, Paula Branco, Mafalda S. Baptista, Charles K. Lee, S. Craig Cary, Catarina Magalhães
Format: Dataset
Language:unknown
Published: 2022
Subjects:
Online Access:https://doi.org/10.3389/fmicb.2022.927129.s003
https://figshare.com/articles/dataset/Table_1_The_spatial_distribution_and_biogeochemical_drivers_of_nitrogen_cycle_genes_in_an_Antarctic_desert_XLSX/21284769
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record_format openpolar
spelling ftfrontimediafig:oai:figshare.com:article/21284769 2024-09-15T17:45:24+00:00 Table_1_The spatial distribution and biogeochemical drivers of nitrogen cycle genes in an Antarctic desert.XLSX Francisco Pascoal Inês Areosa Luís Torgo Paula Branco Mafalda S. Baptista Charles K. Lee S. Craig Cary Catarina Magalhães 2022-10-06T06:03:12Z https://doi.org/10.3389/fmicb.2022.927129.s003 https://figshare.com/articles/dataset/Table_1_The_spatial_distribution_and_biogeochemical_drivers_of_nitrogen_cycle_genes_in_an_Antarctic_desert_XLSX/21284769 unknown doi:10.3389/fmicb.2022.927129.s003 https://figshare.com/articles/dataset/Table_1_The_spatial_distribution_and_biogeochemical_drivers_of_nitrogen_cycle_genes_in_an_Antarctic_desert_XLSX/21284769 CC BY 4.0 Microbiology Microbial Genetics Microbial Ecology Mycology nitrogen cycle Antarctic desert Antarctic metagenomics nitrogen-cycling genes association rules McMurdo Dry Valleys Dataset 2022 ftfrontimediafig https://doi.org/10.3389/fmicb.2022.927129.s003 2024-08-19T06:20:01Z Antarctic deserts, such as the McMurdo Dry Valleys (MDV), represent extremely cold and dry environments. Consequently, MDV are suitable for studying the environment limits on the cycling of key elements that are necessary for life, like nitrogen. The spatial distribution and biogeochemical drivers of nitrogen-cycling pathways remain elusive in the Antarctic deserts because most studies focus on specific nitrogen-cycling genes and/or organisms. In this study, we analyzed metagenome and relevant environmental data of 32 MDV soils to generate a complete picture of the nitrogen-cycling potential in MDV microbial communities and advance our knowledge of the complexity and distribution of nitrogen biogeochemistry in these harsh environments. We found evidence of nitrogen-cycling genes potentially capable of fully oxidizing and reducing molecular nitrogen, despite the inhospitable conditions of MDV. Strong positive correlations were identified between genes involved in nitrogen cycling. Clear relationships between nitrogen-cycling pathways and environmental parameters also indicate abiotic and biotic variables, like pH, water availability, and biological complexity that collectively impose limits on the distribution of nitrogen-cycling genes. Accordingly, the spatial distribution of nitrogen-cycling genes was more concentrated near the lakes and glaciers. Association rules revealed non-linear correlations between complex combinations of environmental variables and nitrogen-cycling genes. Association rules for the presence of denitrification genes presented a distinct combination of environmental variables from the remaining nitrogen-cycling genes. This study contributes to an integrative picture of the nitrogen-cycling potential in MDV. Dataset Antarc* Antarctic McMurdo Dry Valleys Frontiers: Figshare
institution Open Polar
collection Frontiers: Figshare
op_collection_id ftfrontimediafig
language unknown
topic Microbiology
Microbial Genetics
Microbial Ecology
Mycology
nitrogen cycle
Antarctic desert
Antarctic metagenomics
nitrogen-cycling genes
association rules
McMurdo Dry Valleys
spellingShingle Microbiology
Microbial Genetics
Microbial Ecology
Mycology
nitrogen cycle
Antarctic desert
Antarctic metagenomics
nitrogen-cycling genes
association rules
McMurdo Dry Valleys
Francisco Pascoal
Inês Areosa
Luís Torgo
Paula Branco
Mafalda S. Baptista
Charles K. Lee
S. Craig Cary
Catarina Magalhães
Table_1_The spatial distribution and biogeochemical drivers of nitrogen cycle genes in an Antarctic desert.XLSX
topic_facet Microbiology
Microbial Genetics
Microbial Ecology
Mycology
nitrogen cycle
Antarctic desert
Antarctic metagenomics
nitrogen-cycling genes
association rules
McMurdo Dry Valleys
description Antarctic deserts, such as the McMurdo Dry Valleys (MDV), represent extremely cold and dry environments. Consequently, MDV are suitable for studying the environment limits on the cycling of key elements that are necessary for life, like nitrogen. The spatial distribution and biogeochemical drivers of nitrogen-cycling pathways remain elusive in the Antarctic deserts because most studies focus on specific nitrogen-cycling genes and/or organisms. In this study, we analyzed metagenome and relevant environmental data of 32 MDV soils to generate a complete picture of the nitrogen-cycling potential in MDV microbial communities and advance our knowledge of the complexity and distribution of nitrogen biogeochemistry in these harsh environments. We found evidence of nitrogen-cycling genes potentially capable of fully oxidizing and reducing molecular nitrogen, despite the inhospitable conditions of MDV. Strong positive correlations were identified between genes involved in nitrogen cycling. Clear relationships between nitrogen-cycling pathways and environmental parameters also indicate abiotic and biotic variables, like pH, water availability, and biological complexity that collectively impose limits on the distribution of nitrogen-cycling genes. Accordingly, the spatial distribution of nitrogen-cycling genes was more concentrated near the lakes and glaciers. Association rules revealed non-linear correlations between complex combinations of environmental variables and nitrogen-cycling genes. Association rules for the presence of denitrification genes presented a distinct combination of environmental variables from the remaining nitrogen-cycling genes. This study contributes to an integrative picture of the nitrogen-cycling potential in MDV.
format Dataset
author Francisco Pascoal
Inês Areosa
Luís Torgo
Paula Branco
Mafalda S. Baptista
Charles K. Lee
S. Craig Cary
Catarina Magalhães
author_facet Francisco Pascoal
Inês Areosa
Luís Torgo
Paula Branco
Mafalda S. Baptista
Charles K. Lee
S. Craig Cary
Catarina Magalhães
author_sort Francisco Pascoal
title Table_1_The spatial distribution and biogeochemical drivers of nitrogen cycle genes in an Antarctic desert.XLSX
title_short Table_1_The spatial distribution and biogeochemical drivers of nitrogen cycle genes in an Antarctic desert.XLSX
title_full Table_1_The spatial distribution and biogeochemical drivers of nitrogen cycle genes in an Antarctic desert.XLSX
title_fullStr Table_1_The spatial distribution and biogeochemical drivers of nitrogen cycle genes in an Antarctic desert.XLSX
title_full_unstemmed Table_1_The spatial distribution and biogeochemical drivers of nitrogen cycle genes in an Antarctic desert.XLSX
title_sort table_1_the spatial distribution and biogeochemical drivers of nitrogen cycle genes in an antarctic desert.xlsx
publishDate 2022
url https://doi.org/10.3389/fmicb.2022.927129.s003
https://figshare.com/articles/dataset/Table_1_The_spatial_distribution_and_biogeochemical_drivers_of_nitrogen_cycle_genes_in_an_Antarctic_desert_XLSX/21284769
genre Antarc*
Antarctic
McMurdo Dry Valleys
genre_facet Antarc*
Antarctic
McMurdo Dry Valleys
op_relation doi:10.3389/fmicb.2022.927129.s003
https://figshare.com/articles/dataset/Table_1_The_spatial_distribution_and_biogeochemical_drivers_of_nitrogen_cycle_genes_in_an_Antarctic_desert_XLSX/21284769
op_rights CC BY 4.0
op_doi https://doi.org/10.3389/fmicb.2022.927129.s003
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