Data_Sheet_1_Particles act as ‘specialty centers’ with expanded enzymatic function throughout the water column in the western North Atlantic.pdf

Heterotrophic bacteria initiate the degradation of high molecular weight organic matter by producing an array of extracellular enzymes to hydrolyze complex organic matter into sizes that can be taken up into the cell. These bacterial communities differ spatially and temporally in composition, and po...

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Bibliographic Details
Main Authors: C. Chad Lloyd, Sarah Brown, John Paul Balmonte, Adrienne Hoarfrost, Sherif Ghobrial, Carol Arnosti
Format: Dataset
Language:unknown
Published: 2022
Subjects:
Online Access:https://doi.org/10.3389/fmicb.2022.882333.s001
https://figshare.com/articles/dataset/Data_Sheet_1_Particles_act_as_specialty_centers_with_expanded_enzymatic_function_throughout_the_water_column_in_the_western_North_Atlantic_pdf/21218546
id ftfrontimediafig:oai:figshare.com:article/21218546
record_format openpolar
spelling ftfrontimediafig:oai:figshare.com:article/21218546 2024-09-15T18:24:01+00:00 Data_Sheet_1_Particles act as ‘specialty centers’ with expanded enzymatic function throughout the water column in the western North Atlantic.pdf C. Chad Lloyd Sarah Brown John Paul Balmonte Adrienne Hoarfrost Sherif Ghobrial Carol Arnosti 2022-09-28T04:02:03Z https://doi.org/10.3389/fmicb.2022.882333.s001 https://figshare.com/articles/dataset/Data_Sheet_1_Particles_act_as_specialty_centers_with_expanded_enzymatic_function_throughout_the_water_column_in_the_western_North_Atlantic_pdf/21218546 unknown doi:10.3389/fmicb.2022.882333.s001 https://figshare.com/articles/dataset/Data_Sheet_1_Particles_act_as_specialty_centers_with_expanded_enzymatic_function_throughout_the_water_column_in_the_western_North_Atlantic_pdf/21218546 CC BY 4.0 Microbiology Microbial Genetics Microbial Ecology Mycology organic matter polysaccharide hydrolase peptidase biological pump community composition mesopelagic bathypelagic Dataset 2022 ftfrontimediafig https://doi.org/10.3389/fmicb.2022.882333.s001 2024-08-19T06:19:50Z Heterotrophic bacteria initiate the degradation of high molecular weight organic matter by producing an array of extracellular enzymes to hydrolyze complex organic matter into sizes that can be taken up into the cell. These bacterial communities differ spatially and temporally in composition, and potentially also in their enzymatic complements. Previous research has shown that particle-associated bacteria can be considerably more active than bacteria in the surrounding bulk water, but most prior studies of particle-associated bacteria have been focused on the upper ocean - there are few measurements of enzymatic activities of particle-associated bacteria in the mesopelagic and bathypelagic ocean, although the bacterial communities in the deep are dependent upon degradation of particulate organic matter to fuel their metabolism. We used a broad suite of substrates to compare the glucosidase, peptidase, and polysaccharide hydrolase activities of particle-associated and unfiltered seawater microbial communities in epipelagic, mesopelagic, and bathypelagic waters across 11 stations in the western North Atlantic. We concurrently determined bacterial community composition of unfiltered seawater and of samples collected via gravity filtration (>3 μm). Overall, particle-associated bacterial communities showed a broader spectrum of enzyme activities compared with unfiltered seawater communities. These differences in enzymatic activities were greater at offshore than at coastal locations, and increased with increasing depth in the ocean. The greater differences in enzymatic function measured on particles with depth coincided with increasing differences in particle-associated community composition, suggesting that particles act as ‘specialty centers’ that are essential for degradation of organic matter even at bathypelagic depths. Dataset North Atlantic Frontiers: Figshare
institution Open Polar
collection Frontiers: Figshare
op_collection_id ftfrontimediafig
language unknown
topic Microbiology
Microbial Genetics
Microbial Ecology
Mycology
organic matter
polysaccharide hydrolase
peptidase
biological pump
community composition
mesopelagic
bathypelagic
spellingShingle Microbiology
Microbial Genetics
Microbial Ecology
Mycology
organic matter
polysaccharide hydrolase
peptidase
biological pump
community composition
mesopelagic
bathypelagic
C. Chad Lloyd
Sarah Brown
John Paul Balmonte
Adrienne Hoarfrost
Sherif Ghobrial
Carol Arnosti
Data_Sheet_1_Particles act as ‘specialty centers’ with expanded enzymatic function throughout the water column in the western North Atlantic.pdf
topic_facet Microbiology
Microbial Genetics
Microbial Ecology
Mycology
organic matter
polysaccharide hydrolase
peptidase
biological pump
community composition
mesopelagic
bathypelagic
description Heterotrophic bacteria initiate the degradation of high molecular weight organic matter by producing an array of extracellular enzymes to hydrolyze complex organic matter into sizes that can be taken up into the cell. These bacterial communities differ spatially and temporally in composition, and potentially also in their enzymatic complements. Previous research has shown that particle-associated bacteria can be considerably more active than bacteria in the surrounding bulk water, but most prior studies of particle-associated bacteria have been focused on the upper ocean - there are few measurements of enzymatic activities of particle-associated bacteria in the mesopelagic and bathypelagic ocean, although the bacterial communities in the deep are dependent upon degradation of particulate organic matter to fuel their metabolism. We used a broad suite of substrates to compare the glucosidase, peptidase, and polysaccharide hydrolase activities of particle-associated and unfiltered seawater microbial communities in epipelagic, mesopelagic, and bathypelagic waters across 11 stations in the western North Atlantic. We concurrently determined bacterial community composition of unfiltered seawater and of samples collected via gravity filtration (>3 μm). Overall, particle-associated bacterial communities showed a broader spectrum of enzyme activities compared with unfiltered seawater communities. These differences in enzymatic activities were greater at offshore than at coastal locations, and increased with increasing depth in the ocean. The greater differences in enzymatic function measured on particles with depth coincided with increasing differences in particle-associated community composition, suggesting that particles act as ‘specialty centers’ that are essential for degradation of organic matter even at bathypelagic depths.
format Dataset
author C. Chad Lloyd
Sarah Brown
John Paul Balmonte
Adrienne Hoarfrost
Sherif Ghobrial
Carol Arnosti
author_facet C. Chad Lloyd
Sarah Brown
John Paul Balmonte
Adrienne Hoarfrost
Sherif Ghobrial
Carol Arnosti
author_sort C. Chad Lloyd
title Data_Sheet_1_Particles act as ‘specialty centers’ with expanded enzymatic function throughout the water column in the western North Atlantic.pdf
title_short Data_Sheet_1_Particles act as ‘specialty centers’ with expanded enzymatic function throughout the water column in the western North Atlantic.pdf
title_full Data_Sheet_1_Particles act as ‘specialty centers’ with expanded enzymatic function throughout the water column in the western North Atlantic.pdf
title_fullStr Data_Sheet_1_Particles act as ‘specialty centers’ with expanded enzymatic function throughout the water column in the western North Atlantic.pdf
title_full_unstemmed Data_Sheet_1_Particles act as ‘specialty centers’ with expanded enzymatic function throughout the water column in the western North Atlantic.pdf
title_sort data_sheet_1_particles act as ‘specialty centers’ with expanded enzymatic function throughout the water column in the western north atlantic.pdf
publishDate 2022
url https://doi.org/10.3389/fmicb.2022.882333.s001
https://figshare.com/articles/dataset/Data_Sheet_1_Particles_act_as_specialty_centers_with_expanded_enzymatic_function_throughout_the_water_column_in_the_western_North_Atlantic_pdf/21218546
genre North Atlantic
genre_facet North Atlantic
op_relation doi:10.3389/fmicb.2022.882333.s001
https://figshare.com/articles/dataset/Data_Sheet_1_Particles_act_as_specialty_centers_with_expanded_enzymatic_function_throughout_the_water_column_in_the_western_North_Atlantic_pdf/21218546
op_rights CC BY 4.0
op_doi https://doi.org/10.3389/fmicb.2022.882333.s001
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