Table_1_Effect of diet on molecular relationships between Atlantic cod larval muscle growth dynamics, metabolism, and antioxidant defense system.xlsx

We studied molecular effects (RNAseq and qPCR) of first feeding prey types (copepods or rotifers/Artemia) on skeletal muscle myogenesis and growth dynamics (proliferation, differentiation), metabolism (glycolysis, gluconeogenesis, oxidative phosphorylation), and antioxidant defense system (productio...

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Bibliographic Details
Main Authors: Tu A. Vo, Trina F. Galloway, Augustine Arukwe, Rolf B. Edvardsen, Kristin Hamre, Ørjan Karlsen, Ivar Rønnestad, Elin Kjørsvik
Format: Dataset
Language:unknown
Published: 2022
Subjects:
Online Access:https://doi.org/10.3389/fmars.2022.814022.s001
https://figshare.com/articles/dataset/Table_1_Effect_of_diet_on_molecular_relationships_between_Atlantic_cod_larval_muscle_growth_dynamics_metabolism_and_antioxidant_defense_system_xlsx/20462007
id ftfrontimediafig:oai:figshare.com:article/20462007
record_format openpolar
spelling ftfrontimediafig:oai:figshare.com:article/20462007 2023-05-15T15:27:29+02:00 Table_1_Effect of diet on molecular relationships between Atlantic cod larval muscle growth dynamics, metabolism, and antioxidant defense system.xlsx Tu A. Vo Trina F. Galloway Augustine Arukwe Rolf B. Edvardsen Kristin Hamre Ørjan Karlsen Ivar Rønnestad Elin Kjørsvik 2022-08-10T06:43:59Z https://doi.org/10.3389/fmars.2022.814022.s001 https://figshare.com/articles/dataset/Table_1_Effect_of_diet_on_molecular_relationships_between_Atlantic_cod_larval_muscle_growth_dynamics_metabolism_and_antioxidant_defense_system_xlsx/20462007 unknown doi:10.3389/fmars.2022.814022.s001 https://figshare.com/articles/dataset/Table_1_Effect_of_diet_on_molecular_relationships_between_Atlantic_cod_larval_muscle_growth_dynamics_metabolism_and_antioxidant_defense_system_xlsx/20462007 CC BY 4.0 CC-BY Oceanography Marine Biology Marine Geoscience Biological Oceanography Chemical Oceanography Physical Oceanography Marine Engineering Atlantic cod larvae larval nutrition muscle hypertrophy and hyperplasia larval metabolism antioxidant defense system muscle growth and differentiation Gadus morhua (L.) larval growth Dataset 2022 ftfrontimediafig https://doi.org/10.3389/fmars.2022.814022.s001 2022-08-10T23:04:32Z We studied molecular effects (RNAseq and qPCR) of first feeding prey types (copepods or rotifers/Artemia) on skeletal muscle myogenesis and growth dynamics (proliferation, differentiation), metabolism (glycolysis, gluconeogenesis, oxidative phosphorylation), and antioxidant defense system (production/regulation of reactive oxygen species (ROS) in cod (Gadus morhua) larval skeletal muscle. Larval somatic growth rates were significantly higher in copepod fed larvae, although shifts in gene expressions related to muscle growth dynamics between hypertrophy and hyperplasia and generation and regulation of ROS mostly occurred around 5-, 10-, and 15-mm standard length (SL) for both groups. Gene expression for cell membrane proteins (such as nox1 and igf1r) peaked at 7 mm SL in all larvae, corresponding with increased ROS expressions in cod muscle during the exponential stratified hyperplasia phase from 7 mm SL. Expression for muscle differentiation (mef2a) occurred continuously (strongest from 10 mm SL). Expressions for muscle proliferation (pcna) and hydrogen peroxide (H 2 O 2 ) generation (sod1 and sod2) occurred in the 5 - 15 mm SL range, peaking at 10 mm SL in all larvae. A downregulation of sod1 and sod2 in skeletal muscle from 15 mm SL indicated the first response of the defense antioxidant system. Gene expressions related to glucose metabolism (slc2A11, pfk, fpb2, ldha) was 3 - 10 times higher in copepod-fed larvae than in rotifer/Artemia-fed larvae between 7 – 10 mm (live prey period). Copepods move faster than rotifers, and cod larvae will also gradually increase their active swimming periods, due to less viscous forces. Active swimming during the strongest muscle stratified hyperplasia phase (7 – 10 mm SL) could promote a better delivery and transport across the muscle membrane and intracellular flux through glycolysis and oxidative phosphorylation and would contribute to the observed earlier and more effective glucose metabolism in the larvae fed copepods. We suggest that active swimming is an important ... Dataset atlantic cod Gadus morhua Copepods Rotifer Frontiers: Figshare
institution Open Polar
collection Frontiers: Figshare
op_collection_id ftfrontimediafig
language unknown
topic Oceanography
Marine Biology
Marine Geoscience
Biological Oceanography
Chemical Oceanography
Physical Oceanography
Marine Engineering
Atlantic cod larvae
larval nutrition
muscle hypertrophy and hyperplasia
larval metabolism
antioxidant defense system
muscle growth and differentiation
Gadus morhua (L.)
larval growth
spellingShingle Oceanography
Marine Biology
Marine Geoscience
Biological Oceanography
Chemical Oceanography
Physical Oceanography
Marine Engineering
Atlantic cod larvae
larval nutrition
muscle hypertrophy and hyperplasia
larval metabolism
antioxidant defense system
muscle growth and differentiation
Gadus morhua (L.)
larval growth
Tu A. Vo
Trina F. Galloway
Augustine Arukwe
Rolf B. Edvardsen
Kristin Hamre
Ørjan Karlsen
Ivar Rønnestad
Elin Kjørsvik
Table_1_Effect of diet on molecular relationships between Atlantic cod larval muscle growth dynamics, metabolism, and antioxidant defense system.xlsx
topic_facet Oceanography
Marine Biology
Marine Geoscience
Biological Oceanography
Chemical Oceanography
Physical Oceanography
Marine Engineering
Atlantic cod larvae
larval nutrition
muscle hypertrophy and hyperplasia
larval metabolism
antioxidant defense system
muscle growth and differentiation
Gadus morhua (L.)
larval growth
description We studied molecular effects (RNAseq and qPCR) of first feeding prey types (copepods or rotifers/Artemia) on skeletal muscle myogenesis and growth dynamics (proliferation, differentiation), metabolism (glycolysis, gluconeogenesis, oxidative phosphorylation), and antioxidant defense system (production/regulation of reactive oxygen species (ROS) in cod (Gadus morhua) larval skeletal muscle. Larval somatic growth rates were significantly higher in copepod fed larvae, although shifts in gene expressions related to muscle growth dynamics between hypertrophy and hyperplasia and generation and regulation of ROS mostly occurred around 5-, 10-, and 15-mm standard length (SL) for both groups. Gene expression for cell membrane proteins (such as nox1 and igf1r) peaked at 7 mm SL in all larvae, corresponding with increased ROS expressions in cod muscle during the exponential stratified hyperplasia phase from 7 mm SL. Expression for muscle differentiation (mef2a) occurred continuously (strongest from 10 mm SL). Expressions for muscle proliferation (pcna) and hydrogen peroxide (H 2 O 2 ) generation (sod1 and sod2) occurred in the 5 - 15 mm SL range, peaking at 10 mm SL in all larvae. A downregulation of sod1 and sod2 in skeletal muscle from 15 mm SL indicated the first response of the defense antioxidant system. Gene expressions related to glucose metabolism (slc2A11, pfk, fpb2, ldha) was 3 - 10 times higher in copepod-fed larvae than in rotifer/Artemia-fed larvae between 7 – 10 mm (live prey period). Copepods move faster than rotifers, and cod larvae will also gradually increase their active swimming periods, due to less viscous forces. Active swimming during the strongest muscle stratified hyperplasia phase (7 – 10 mm SL) could promote a better delivery and transport across the muscle membrane and intracellular flux through glycolysis and oxidative phosphorylation and would contribute to the observed earlier and more effective glucose metabolism in the larvae fed copepods. We suggest that active swimming is an important ...
format Dataset
author Tu A. Vo
Trina F. Galloway
Augustine Arukwe
Rolf B. Edvardsen
Kristin Hamre
Ørjan Karlsen
Ivar Rønnestad
Elin Kjørsvik
author_facet Tu A. Vo
Trina F. Galloway
Augustine Arukwe
Rolf B. Edvardsen
Kristin Hamre
Ørjan Karlsen
Ivar Rønnestad
Elin Kjørsvik
author_sort Tu A. Vo
title Table_1_Effect of diet on molecular relationships between Atlantic cod larval muscle growth dynamics, metabolism, and antioxidant defense system.xlsx
title_short Table_1_Effect of diet on molecular relationships between Atlantic cod larval muscle growth dynamics, metabolism, and antioxidant defense system.xlsx
title_full Table_1_Effect of diet on molecular relationships between Atlantic cod larval muscle growth dynamics, metabolism, and antioxidant defense system.xlsx
title_fullStr Table_1_Effect of diet on molecular relationships between Atlantic cod larval muscle growth dynamics, metabolism, and antioxidant defense system.xlsx
title_full_unstemmed Table_1_Effect of diet on molecular relationships between Atlantic cod larval muscle growth dynamics, metabolism, and antioxidant defense system.xlsx
title_sort table_1_effect of diet on molecular relationships between atlantic cod larval muscle growth dynamics, metabolism, and antioxidant defense system.xlsx
publishDate 2022
url https://doi.org/10.3389/fmars.2022.814022.s001
https://figshare.com/articles/dataset/Table_1_Effect_of_diet_on_molecular_relationships_between_Atlantic_cod_larval_muscle_growth_dynamics_metabolism_and_antioxidant_defense_system_xlsx/20462007
genre atlantic cod
Gadus morhua
Copepods
Rotifer
genre_facet atlantic cod
Gadus morhua
Copepods
Rotifer
op_relation doi:10.3389/fmars.2022.814022.s001
https://figshare.com/articles/dataset/Table_1_Effect_of_diet_on_molecular_relationships_between_Atlantic_cod_larval_muscle_growth_dynamics_metabolism_and_antioxidant_defense_system_xlsx/20462007
op_rights CC BY 4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.3389/fmars.2022.814022.s001
_version_ 1766357913279922176