Data_Sheet_3_Evolutionary Relationships and Range Evolution of Greenhood Orchids (Subtribe Pterostylidinae): Insights From Plastid Phylogenomics.PDF

• Main Authors: Katharina Nargar, Kate O’Hara, Allison Mertin, Stephen J. Bent, Lars Nauheimer, Lalita Simpson, Heidi Zimmer, Brian P. J. Molloy, Mark A. Clements
• Format: Dataset
• Language: unknown
• Published: 2022
• Subjects: Botany; Plant Biology; Plant Systematics and Taxonomy; Plant Cell and Molecular Biology; Plant Developmental and Reproductive Biology; Plant Pathology; Plant Physiology; Plant Biology not elsewhere classified; Australia; climate change; divergence-time estimation; long-distance dispersal; range evolution; Orchidaceae; phylogenetics; Pterostylis; Antarctic; The Antarctic; Antarc*; Antarctica
• Online Access: https://doi.org/10.3389/fpls.2022.912089.s003; https://figshare.com/articles/dataset/Data_Sheet_3_Evolutionary_Relationships_and_Range_Evolution_of_Greenhood_Orchids_Subtribe_Pterostylidinae_Insights_From_Plastid_Phylogenomics_PDF/20175053

Australia harbours a rich and highly endemic orchid flora with over 90% of native species found nowhere else. However, little is known about the assembly and evolution of Australia’s orchid flora. Here, we used a phylogenomic approach to infer evolutionary relationships, divergence times and range evolution in Pterostylidinae (Orchidoideae), the second largest subtribe in the Australian orchid flora, comprising the genera Pterostylis and Achlydosa. Phylogenetic analysis of 75 plastid genes provided well-resolved and supported phylogenies. Intrageneric relationships in Pterostylis were clarified and monophyly of eight of 10 sections supported. Achlydosa was found to not form part of Pterostylidinae and instead merits recognition at subtribal level, as Achlydosinae. Pterostylidinae were inferred to have originated in eastern Australia in the early Oligocene, coinciding with the complete separation of Australia from Antarctica and the onset of the Antarctic Circumpolar Current, which led to profound changes in the world’s climate. Divergence of all major lineages occurred during the Miocene, accompanied by increased aridification and seasonality of the Australian continent, resulting in strong vegetational changes from rainforest to more open sclerophyllous vegetation. The majority of extant species were inferred to have originated in the Quaternary, from the Pleistocene onwards. The rapid climatic oscillations during the Pleistocene may have acted as important driver of speciation in Pterostylidinae. The subtribe underwent lineage diversification mainly within its ancestral range, in eastern Australia. Long-distance dispersals to southwest Australia commenced from the late Miocene onwards, after the establishment of the Nullarbor Plain, which constitutes a strong edaphic barrier to mesic plants. Range expansions from the mesic into the arid zone of eastern Australia (Eremaean region) commenced from the early Pleistocene onwards. Extant distributions of Pterostylidinae in other Australasian regions, such as New ...