DataSheet_1_Potential Phosphorus Uptake Mechanisms in the Deep Sedimentary Biosphere.docx

Our understanding of phosphorus (P) dynamics in the deep subseafloor environment remains limited. Here we investigate potential microbial P uptake mechanisms in oligotrophic marine sediments beneath the North Atlantic Gyre and their effects on the relative distribution of organic P compounds as a fu...

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Main Authors: Delphine Defforey, Benjamin J. Tully, Jason B. Sylvan, Barbara J. Cade-Menun, Brandi Kiel Reese, Laura Zinke, Adina Paytan
Format: Dataset
Language:unknown
Published: 2022
Subjects:
Online Access:https://doi.org/10.3389/fmars.2022.907527.s001
https://figshare.com/articles/dataset/DataSheet_1_Potential_Phosphorus_Uptake_Mechanisms_in_the_Deep_Sedimentary_Biosphere_docx/19963196
id ftfrontimediafig:oai:figshare.com:article/19963196
record_format openpolar
spelling ftfrontimediafig:oai:figshare.com:article/19963196 2023-05-15T17:33:31+02:00 DataSheet_1_Potential Phosphorus Uptake Mechanisms in the Deep Sedimentary Biosphere.docx Delphine Defforey Benjamin J. Tully Jason B. Sylvan Barbara J. Cade-Menun Brandi Kiel Reese Laura Zinke Adina Paytan 2022-06-02T15:29:46Z https://doi.org/10.3389/fmars.2022.907527.s001 https://figshare.com/articles/dataset/DataSheet_1_Potential_Phosphorus_Uptake_Mechanisms_in_the_Deep_Sedimentary_Biosphere_docx/19963196 unknown doi:10.3389/fmars.2022.907527.s001 https://figshare.com/articles/dataset/DataSheet_1_Potential_Phosphorus_Uptake_Mechanisms_in_the_Deep_Sedimentary_Biosphere_docx/19963196 CC BY 4.0 CC-BY Oceanography Marine Biology Marine Geoscience Biological Oceanography Chemical Oceanography Physical Oceanography Marine Engineering Marine Sediments P-NMR deep biosphere P substrate metagenome Dataset 2022 ftfrontimediafig https://doi.org/10.3389/fmars.2022.907527.s001 2022-06-08T23:08:13Z Our understanding of phosphorus (P) dynamics in the deep subseafloor environment remains limited. Here we investigate potential microbial P uptake mechanisms in oligotrophic marine sediments beneath the North Atlantic Gyre and their effects on the relative distribution of organic P compounds as a function of burial depth and changing redox conditions. We use metagenomic analyses to determine the presence of microbial functional genes pertaining to P uptake and metabolism, and solution 31 P nuclear magnetic resonance spectroscopy ( 31 P NMR) to characterize and quantify P substrates. Phosphorus compounds or compound classes identified with 31 P NMR include inorganic P compounds (orthophosphate, pyrophosphate, polyphosphate), phosphonates, orthophosphate monoesters (including inositol hexakisphosphate stereoisomers) and orthophosphate diesters (including DNA and phospholipid degradation products). Some of the genes identified include genes related to phosphate transport, phosphonate and polyphosphate metabolism, as well as phosphite uptake. Our findings suggest that the deep sedimentary biosphere may have adapted to take advantage of a wide array of P substrates and could play a role in the gradual breakdown of inositol and sugar phosphates, as well as reduced P compounds and polyphosphates. Dataset North Atlantic Frontiers: Figshare
institution Open Polar
collection Frontiers: Figshare
op_collection_id ftfrontimediafig
language unknown
topic Oceanography
Marine Biology
Marine Geoscience
Biological Oceanography
Chemical Oceanography
Physical Oceanography
Marine Engineering
Marine Sediments
P-NMR
deep biosphere
P substrate
metagenome
spellingShingle Oceanography
Marine Biology
Marine Geoscience
Biological Oceanography
Chemical Oceanography
Physical Oceanography
Marine Engineering
Marine Sediments
P-NMR
deep biosphere
P substrate
metagenome
Delphine Defforey
Benjamin J. Tully
Jason B. Sylvan
Barbara J. Cade-Menun
Brandi Kiel Reese
Laura Zinke
Adina Paytan
DataSheet_1_Potential Phosphorus Uptake Mechanisms in the Deep Sedimentary Biosphere.docx
topic_facet Oceanography
Marine Biology
Marine Geoscience
Biological Oceanography
Chemical Oceanography
Physical Oceanography
Marine Engineering
Marine Sediments
P-NMR
deep biosphere
P substrate
metagenome
description Our understanding of phosphorus (P) dynamics in the deep subseafloor environment remains limited. Here we investigate potential microbial P uptake mechanisms in oligotrophic marine sediments beneath the North Atlantic Gyre and their effects on the relative distribution of organic P compounds as a function of burial depth and changing redox conditions. We use metagenomic analyses to determine the presence of microbial functional genes pertaining to P uptake and metabolism, and solution 31 P nuclear magnetic resonance spectroscopy ( 31 P NMR) to characterize and quantify P substrates. Phosphorus compounds or compound classes identified with 31 P NMR include inorganic P compounds (orthophosphate, pyrophosphate, polyphosphate), phosphonates, orthophosphate monoesters (including inositol hexakisphosphate stereoisomers) and orthophosphate diesters (including DNA and phospholipid degradation products). Some of the genes identified include genes related to phosphate transport, phosphonate and polyphosphate metabolism, as well as phosphite uptake. Our findings suggest that the deep sedimentary biosphere may have adapted to take advantage of a wide array of P substrates and could play a role in the gradual breakdown of inositol and sugar phosphates, as well as reduced P compounds and polyphosphates.
format Dataset
author Delphine Defforey
Benjamin J. Tully
Jason B. Sylvan
Barbara J. Cade-Menun
Brandi Kiel Reese
Laura Zinke
Adina Paytan
author_facet Delphine Defforey
Benjamin J. Tully
Jason B. Sylvan
Barbara J. Cade-Menun
Brandi Kiel Reese
Laura Zinke
Adina Paytan
author_sort Delphine Defforey
title DataSheet_1_Potential Phosphorus Uptake Mechanisms in the Deep Sedimentary Biosphere.docx
title_short DataSheet_1_Potential Phosphorus Uptake Mechanisms in the Deep Sedimentary Biosphere.docx
title_full DataSheet_1_Potential Phosphorus Uptake Mechanisms in the Deep Sedimentary Biosphere.docx
title_fullStr DataSheet_1_Potential Phosphorus Uptake Mechanisms in the Deep Sedimentary Biosphere.docx
title_full_unstemmed DataSheet_1_Potential Phosphorus Uptake Mechanisms in the Deep Sedimentary Biosphere.docx
title_sort datasheet_1_potential phosphorus uptake mechanisms in the deep sedimentary biosphere.docx
publishDate 2022
url https://doi.org/10.3389/fmars.2022.907527.s001
https://figshare.com/articles/dataset/DataSheet_1_Potential_Phosphorus_Uptake_Mechanisms_in_the_Deep_Sedimentary_Biosphere_docx/19963196
genre North Atlantic
genre_facet North Atlantic
op_relation doi:10.3389/fmars.2022.907527.s001
https://figshare.com/articles/dataset/DataSheet_1_Potential_Phosphorus_Uptake_Mechanisms_in_the_Deep_Sedimentary_Biosphere_docx/19963196
op_rights CC BY 4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.3389/fmars.2022.907527.s001
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