DataSheet_2_Transcriptomic Responses of Adult Versus Juvenile Atlantids to Ocean Acidification.xlsx
Shelled holoplanktonic gastropods are among the most vulnerable calcifiers to ocean acidification. They inhabit the pelagic environment and build thin and transparent shells of aragonite, a metastable form of calcium carbonate. While shelled pteropods have received considerable attention and are wid...
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ftfrontimediafig:oai:figshare.com:article/19770112 2023-05-15T17:49:57+02:00 DataSheet_2_Transcriptomic Responses of Adult Versus Juvenile Atlantids to Ocean Acidification.xlsx Paula Ramos-Silva Mari-Lee Odendaal Deborah Wall-Palmer Lisette Mekkes Katja T. C. A. Peijnenburg 2022-05-16T04:44:53Z https://doi.org/10.3389/fmars.2022.801458.s002 https://figshare.com/articles/dataset/DataSheet_2_Transcriptomic_Responses_of_Adult_Versus_Juvenile_Atlantids_to_Ocean_Acidification_xlsx/19770112 unknown doi:10.3389/fmars.2022.801458.s002 https://figshare.com/articles/dataset/DataSheet_2_Transcriptomic_Responses_of_Adult_Versus_Juvenile_Atlantids_to_Ocean_Acidification_xlsx/19770112 CC BY 4.0 CC-BY Oceanography Marine Biology Marine Geoscience Biological Oceanography Chemical Oceanography Physical Oceanography Marine Engineering ocean acidification bioindicator gene expression calcification planktonic gastropods atlantids life stages Dataset 2022 ftfrontimediafig https://doi.org/10.3389/fmars.2022.801458.s002 2022-05-18T23:10:43Z Shelled holoplanktonic gastropods are among the most vulnerable calcifiers to ocean acidification. They inhabit the pelagic environment and build thin and transparent shells of aragonite, a metastable form of calcium carbonate. While shelled pteropods have received considerable attention and are widely regarded as bioindicators of ocean acidification, atlantids have been much less studied. In the open ocean, atlantids are uniquely positioned to address the effects of ocean acidification at distinct trophic levels. From juvenile to adult, they undergo dramatic metamorphosis. As adults they are predatory, feeding primarily on shelled pteropods, copepods and other zooplankton, while as juveniles they feed on algae. Here we investigated the transcriptome and the impact of a three-day CO 2 exposure on the gene expression of adults of the atlantid Atlanta ariejansseni and compared these to results previously obtained from juveniles. Individuals were sampled in the Southern Subtropical Convergence Zone (Atlantic Ocean) and exposed to ocean chemistry simulating past (~mid-1960s), present (ambient) and future (2050) conditions. In adults we found that the changes in seawater chemistry had significantly affected the expression of genes involved in biomineralization and the immune response, although there were no significant differences in shell growth between the three conditions. In contrast, juveniles experienced substantial changes in shell growth and a broader transcriptomic response. In adults, 1170 genes had the same direction of expression in the past and future treatments when compared to the ambient. Overall, this type of response was more common in adults (8.6% of all the genes) than in juveniles (3.9%), whereas a linear response with decreasing pH was more common in juveniles (7.7%) than in adults (4.5%). Taken together, these results suggest that juveniles are more sensitive to increased acidification than adults. However, experimental limitations including short incubation times, one carboy used for each ... Dataset Ocean acidification Copepods Frontiers: Figshare |
institution |
Open Polar |
collection |
Frontiers: Figshare |
op_collection_id |
ftfrontimediafig |
language |
unknown |
topic |
Oceanography Marine Biology Marine Geoscience Biological Oceanography Chemical Oceanography Physical Oceanography Marine Engineering ocean acidification bioindicator gene expression calcification planktonic gastropods atlantids life stages |
spellingShingle |
Oceanography Marine Biology Marine Geoscience Biological Oceanography Chemical Oceanography Physical Oceanography Marine Engineering ocean acidification bioindicator gene expression calcification planktonic gastropods atlantids life stages Paula Ramos-Silva Mari-Lee Odendaal Deborah Wall-Palmer Lisette Mekkes Katja T. C. A. Peijnenburg DataSheet_2_Transcriptomic Responses of Adult Versus Juvenile Atlantids to Ocean Acidification.xlsx |
topic_facet |
Oceanography Marine Biology Marine Geoscience Biological Oceanography Chemical Oceanography Physical Oceanography Marine Engineering ocean acidification bioindicator gene expression calcification planktonic gastropods atlantids life stages |
description |
Shelled holoplanktonic gastropods are among the most vulnerable calcifiers to ocean acidification. They inhabit the pelagic environment and build thin and transparent shells of aragonite, a metastable form of calcium carbonate. While shelled pteropods have received considerable attention and are widely regarded as bioindicators of ocean acidification, atlantids have been much less studied. In the open ocean, atlantids are uniquely positioned to address the effects of ocean acidification at distinct trophic levels. From juvenile to adult, they undergo dramatic metamorphosis. As adults they are predatory, feeding primarily on shelled pteropods, copepods and other zooplankton, while as juveniles they feed on algae. Here we investigated the transcriptome and the impact of a three-day CO 2 exposure on the gene expression of adults of the atlantid Atlanta ariejansseni and compared these to results previously obtained from juveniles. Individuals were sampled in the Southern Subtropical Convergence Zone (Atlantic Ocean) and exposed to ocean chemistry simulating past (~mid-1960s), present (ambient) and future (2050) conditions. In adults we found that the changes in seawater chemistry had significantly affected the expression of genes involved in biomineralization and the immune response, although there were no significant differences in shell growth between the three conditions. In contrast, juveniles experienced substantial changes in shell growth and a broader transcriptomic response. In adults, 1170 genes had the same direction of expression in the past and future treatments when compared to the ambient. Overall, this type of response was more common in adults (8.6% of all the genes) than in juveniles (3.9%), whereas a linear response with decreasing pH was more common in juveniles (7.7%) than in adults (4.5%). Taken together, these results suggest that juveniles are more sensitive to increased acidification than adults. However, experimental limitations including short incubation times, one carboy used for each ... |
format |
Dataset |
author |
Paula Ramos-Silva Mari-Lee Odendaal Deborah Wall-Palmer Lisette Mekkes Katja T. C. A. Peijnenburg |
author_facet |
Paula Ramos-Silva Mari-Lee Odendaal Deborah Wall-Palmer Lisette Mekkes Katja T. C. A. Peijnenburg |
author_sort |
Paula Ramos-Silva |
title |
DataSheet_2_Transcriptomic Responses of Adult Versus Juvenile Atlantids to Ocean Acidification.xlsx |
title_short |
DataSheet_2_Transcriptomic Responses of Adult Versus Juvenile Atlantids to Ocean Acidification.xlsx |
title_full |
DataSheet_2_Transcriptomic Responses of Adult Versus Juvenile Atlantids to Ocean Acidification.xlsx |
title_fullStr |
DataSheet_2_Transcriptomic Responses of Adult Versus Juvenile Atlantids to Ocean Acidification.xlsx |
title_full_unstemmed |
DataSheet_2_Transcriptomic Responses of Adult Versus Juvenile Atlantids to Ocean Acidification.xlsx |
title_sort |
datasheet_2_transcriptomic responses of adult versus juvenile atlantids to ocean acidification.xlsx |
publishDate |
2022 |
url |
https://doi.org/10.3389/fmars.2022.801458.s002 https://figshare.com/articles/dataset/DataSheet_2_Transcriptomic_Responses_of_Adult_Versus_Juvenile_Atlantids_to_Ocean_Acidification_xlsx/19770112 |
genre |
Ocean acidification Copepods |
genre_facet |
Ocean acidification Copepods |
op_relation |
doi:10.3389/fmars.2022.801458.s002 https://figshare.com/articles/dataset/DataSheet_2_Transcriptomic_Responses_of_Adult_Versus_Juvenile_Atlantids_to_Ocean_Acidification_xlsx/19770112 |
op_rights |
CC BY 4.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.3389/fmars.2022.801458.s002 |
_version_ |
1766156487893188608 |