Table_1_Genetic Diversity and Population Structure of the Antarctic Toothfish, Dissostichus mawsoni, Using Mitochondrial and Microsatellite DNA Markers.DOCX

The Antarctic toothfish, Dissostichus mawsoni, serves as a valuable fishery resource around the Antarctic Continent since 1997, managed by the Commission for the Conservation of Antarctic Marine Living Resources (CCAMLR). Although delineating genetic or stock structure of populations is crucial for...

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Main Authors: Hee-kyu Choi, Ji Eun Jang, Seo Yeon Byeon, Yu Rim Kim, Dale Maschette, Sangdeok Chung, Seok-Gwan Choi, Hyun-Woo Kim, Hyuk Je Lee
Format: Dataset
Language:unknown
Published: 2021
Subjects:
Online Access:https://doi.org/10.3389/fmars.2021.666417.s008
https://figshare.com/articles/dataset/Table_1_Genetic_Diversity_and_Population_Structure_of_the_Antarctic_Toothfish_Dissostichus_mawsoni_Using_Mitochondrial_and_Microsatellite_DNA_Markers_DOCX/15089808
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spelling ftfrontimediafig:oai:figshare.com:article/15089808 2023-05-15T13:36:09+02:00 Table_1_Genetic Diversity and Population Structure of the Antarctic Toothfish, Dissostichus mawsoni, Using Mitochondrial and Microsatellite DNA Markers.DOCX Hee-kyu Choi Ji Eun Jang Seo Yeon Byeon Yu Rim Kim Dale Maschette Sangdeok Chung Seok-Gwan Choi Hyun-Woo Kim Hyuk Je Lee 2021-08-02T05:47:57Z https://doi.org/10.3389/fmars.2021.666417.s008 https://figshare.com/articles/dataset/Table_1_Genetic_Diversity_and_Population_Structure_of_the_Antarctic_Toothfish_Dissostichus_mawsoni_Using_Mitochondrial_and_Microsatellite_DNA_Markers_DOCX/15089808 unknown doi:10.3389/fmars.2021.666417.s008 https://figshare.com/articles/dataset/Table_1_Genetic_Diversity_and_Population_Structure_of_the_Antarctic_Toothfish_Dissostichus_mawsoni_Using_Mitochondrial_and_Microsatellite_DNA_Markers_DOCX/15089808 CC BY 4.0 CC-BY Oceanography Marine Biology Marine Geoscience Biological Oceanography Chemical Oceanography Physical Oceanography Marine Engineering Antarctic toothfish CCAMLR fishery management genetic diversity population connectivity contemporary gene flow genetic stock phylogeographic break Dataset 2021 ftfrontimediafig https://doi.org/10.3389/fmars.2021.666417.s008 2021-08-04T22:59:39Z The Antarctic toothfish, Dissostichus mawsoni, serves as a valuable fishery resource around the Antarctic Continent since 1997, managed by the Commission for the Conservation of Antarctic Marine Living Resources (CCAMLR). Although delineating genetic or stock structure of populations is crucial for improving fishery management of this species, its number of genetic populations and genetic diversity levels remain ambiguous. In the present study, we assessed the population genetic and phylogeographic structure of the Antarctic toothfish across 20 geographic localities spanning from Subareas 88 (88.1, 88.2, and 88.3) to Subareas 58 (58.4 and 58.5) by using mitochondrial DNA (mtDNA) cytochrome oxidase I (COI) and 16S rRNA (16S) sequences and seven nuclear microsatellite loci. MtDNA revealed a low level of polymorphism (h = 0.571, π = 0.0006) with 40 haplotypes in 392 individuals, connected only by 1–5 mutational steps, which is indicative of shallow evolutionary history. Microsatellites showed a range of allelic richness (AR) from 6.328 (88.3 RB3) to 7.274 (88.3 RB6) within populations. Overall genetic diversity was generally higher in Subareas 58 than in Subareas 88, suggesting that effective population size (N E ) is larger in Subareas 58. The results of population analyses using microsatellites suggest that the sampled populations are likely to comprise a well-admixed single gene pool (i.e., one genetic stock), perhaps due to high contemporary gene flow occurring during the prolonged larval phase of this fish. However, given weak, but significant microsatellite differentiation found in six population-pairs, the possibility of existence of multiple genetic populations could not be completely excluded. The mtDNA AMOVA suggests a genetic break between the Subareas 88 and 58 groups (F CT = 0.011, P = 0.004). Moreover, mtDNA genetic distances (F ST ) between populations were proportionally greater as geographic distances increase. The patterns of isolation by distance (IBD) shown only in mtDNA, but not in ... Dataset Antarc* Antarctic Antarctic Toothfish Frontiers: Figshare Antarctic The Antarctic
institution Open Polar
collection Frontiers: Figshare
op_collection_id ftfrontimediafig
language unknown
topic Oceanography
Marine Biology
Marine Geoscience
Biological Oceanography
Chemical Oceanography
Physical Oceanography
Marine Engineering
Antarctic toothfish
CCAMLR
fishery management
genetic diversity
population connectivity
contemporary gene flow
genetic stock
phylogeographic break
spellingShingle Oceanography
Marine Biology
Marine Geoscience
Biological Oceanography
Chemical Oceanography
Physical Oceanography
Marine Engineering
Antarctic toothfish
CCAMLR
fishery management
genetic diversity
population connectivity
contemporary gene flow
genetic stock
phylogeographic break
Hee-kyu Choi
Ji Eun Jang
Seo Yeon Byeon
Yu Rim Kim
Dale Maschette
Sangdeok Chung
Seok-Gwan Choi
Hyun-Woo Kim
Hyuk Je Lee
Table_1_Genetic Diversity and Population Structure of the Antarctic Toothfish, Dissostichus mawsoni, Using Mitochondrial and Microsatellite DNA Markers.DOCX
topic_facet Oceanography
Marine Biology
Marine Geoscience
Biological Oceanography
Chemical Oceanography
Physical Oceanography
Marine Engineering
Antarctic toothfish
CCAMLR
fishery management
genetic diversity
population connectivity
contemporary gene flow
genetic stock
phylogeographic break
description The Antarctic toothfish, Dissostichus mawsoni, serves as a valuable fishery resource around the Antarctic Continent since 1997, managed by the Commission for the Conservation of Antarctic Marine Living Resources (CCAMLR). Although delineating genetic or stock structure of populations is crucial for improving fishery management of this species, its number of genetic populations and genetic diversity levels remain ambiguous. In the present study, we assessed the population genetic and phylogeographic structure of the Antarctic toothfish across 20 geographic localities spanning from Subareas 88 (88.1, 88.2, and 88.3) to Subareas 58 (58.4 and 58.5) by using mitochondrial DNA (mtDNA) cytochrome oxidase I (COI) and 16S rRNA (16S) sequences and seven nuclear microsatellite loci. MtDNA revealed a low level of polymorphism (h = 0.571, π = 0.0006) with 40 haplotypes in 392 individuals, connected only by 1–5 mutational steps, which is indicative of shallow evolutionary history. Microsatellites showed a range of allelic richness (AR) from 6.328 (88.3 RB3) to 7.274 (88.3 RB6) within populations. Overall genetic diversity was generally higher in Subareas 58 than in Subareas 88, suggesting that effective population size (N E ) is larger in Subareas 58. The results of population analyses using microsatellites suggest that the sampled populations are likely to comprise a well-admixed single gene pool (i.e., one genetic stock), perhaps due to high contemporary gene flow occurring during the prolonged larval phase of this fish. However, given weak, but significant microsatellite differentiation found in six population-pairs, the possibility of existence of multiple genetic populations could not be completely excluded. The mtDNA AMOVA suggests a genetic break between the Subareas 88 and 58 groups (F CT = 0.011, P = 0.004). Moreover, mtDNA genetic distances (F ST ) between populations were proportionally greater as geographic distances increase. The patterns of isolation by distance (IBD) shown only in mtDNA, but not in ...
format Dataset
author Hee-kyu Choi
Ji Eun Jang
Seo Yeon Byeon
Yu Rim Kim
Dale Maschette
Sangdeok Chung
Seok-Gwan Choi
Hyun-Woo Kim
Hyuk Je Lee
author_facet Hee-kyu Choi
Ji Eun Jang
Seo Yeon Byeon
Yu Rim Kim
Dale Maschette
Sangdeok Chung
Seok-Gwan Choi
Hyun-Woo Kim
Hyuk Je Lee
author_sort Hee-kyu Choi
title Table_1_Genetic Diversity and Population Structure of the Antarctic Toothfish, Dissostichus mawsoni, Using Mitochondrial and Microsatellite DNA Markers.DOCX
title_short Table_1_Genetic Diversity and Population Structure of the Antarctic Toothfish, Dissostichus mawsoni, Using Mitochondrial and Microsatellite DNA Markers.DOCX
title_full Table_1_Genetic Diversity and Population Structure of the Antarctic Toothfish, Dissostichus mawsoni, Using Mitochondrial and Microsatellite DNA Markers.DOCX
title_fullStr Table_1_Genetic Diversity and Population Structure of the Antarctic Toothfish, Dissostichus mawsoni, Using Mitochondrial and Microsatellite DNA Markers.DOCX
title_full_unstemmed Table_1_Genetic Diversity and Population Structure of the Antarctic Toothfish, Dissostichus mawsoni, Using Mitochondrial and Microsatellite DNA Markers.DOCX
title_sort table_1_genetic diversity and population structure of the antarctic toothfish, dissostichus mawsoni, using mitochondrial and microsatellite dna markers.docx
publishDate 2021
url https://doi.org/10.3389/fmars.2021.666417.s008
https://figshare.com/articles/dataset/Table_1_Genetic_Diversity_and_Population_Structure_of_the_Antarctic_Toothfish_Dissostichus_mawsoni_Using_Mitochondrial_and_Microsatellite_DNA_Markers_DOCX/15089808
geographic Antarctic
The Antarctic
geographic_facet Antarctic
The Antarctic
genre Antarc*
Antarctic
Antarctic Toothfish
genre_facet Antarc*
Antarctic
Antarctic Toothfish
op_relation doi:10.3389/fmars.2021.666417.s008
https://figshare.com/articles/dataset/Table_1_Genetic_Diversity_and_Population_Structure_of_the_Antarctic_Toothfish_Dissostichus_mawsoni_Using_Mitochondrial_and_Microsatellite_DNA_Markers_DOCX/15089808
op_rights CC BY 4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.3389/fmars.2021.666417.s008
_version_ 1766074843881537536