Data_Sheet_5_Patterns of Microbiome Variation Among Infrapopulations of Permanent Bloodsucking Parasites.pdf
While interspecific variation in microbiome composition can often be readily explained by factors such as host species identity, there is still limited knowledge of how microbiomes vary at scales lower than the species level (e.g., between individuals or populations). Here, we evaluated variation in...
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ftfrontimediafig:oai:figshare.com:article/14429756 2023-05-15T18:03:47+02:00 Data_Sheet_5_Patterns of Microbiome Variation Among Infrapopulations of Permanent Bloodsucking Parasites.pdf Jorge Doña Stephany Virrueta Herrera Tommi Nyman Mervi Kunnasranta Kevin P. Johnson 2021-04-16T04:26:40Z https://doi.org/10.3389/fmicb.2021.642543.s005 https://figshare.com/articles/dataset/Data_Sheet_5_Patterns_of_Microbiome_Variation_Among_Infrapopulations_of_Permanent_Bloodsucking_Parasites_pdf/14429756 unknown doi:10.3389/fmicb.2021.642543.s005 https://figshare.com/articles/dataset/Data_Sheet_5_Patterns_of_Microbiome_Variation_Among_Infrapopulations_of_Permanent_Bloodsucking_Parasites_pdf/14429756 CC BY 4.0 CC-BY Microbiology Microbial Genetics Microbial Ecology Mycology genome-resolved metagenomics host-symbiont intraspecific variation lice microbiota shotgun metagenomics symbiont Dataset 2021 ftfrontimediafig https://doi.org/10.3389/fmicb.2021.642543.s005 2021-04-21T23:00:11Z While interspecific variation in microbiome composition can often be readily explained by factors such as host species identity, there is still limited knowledge of how microbiomes vary at scales lower than the species level (e.g., between individuals or populations). Here, we evaluated variation in microbiome composition of individual parasites among infrapopulations (i.e., populations of parasites of the same species living on a single host individual). To address this question, we used genome-resolved and shotgun metagenomic data of 17 infrapopulations (balanced design) of the permanent, bloodsucking seal louse Echinophthirius horridus sampled from individual Saimaa ringed seals Pusa hispida saimensis. Both genome-resolved and read-based metagenomic classification approaches consistently show that parasite infrapopulation identity is a significant factor that explains both qualitative and quantitative patterns of microbiome variation at the intraspecific level. This study contributes to the general understanding of the factors driving patterns of intraspecific variation in microbiome composition, especially of bloodsucking parasites, and has implications for understanding how well-known processes occurring at higher taxonomic levels, such as phylosymbiosis, might arise in these systems. Dataset Pusa hispida Frontiers: Figshare |
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Open Polar |
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Frontiers: Figshare |
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ftfrontimediafig |
language |
unknown |
topic |
Microbiology Microbial Genetics Microbial Ecology Mycology genome-resolved metagenomics host-symbiont intraspecific variation lice microbiota shotgun metagenomics symbiont |
spellingShingle |
Microbiology Microbial Genetics Microbial Ecology Mycology genome-resolved metagenomics host-symbiont intraspecific variation lice microbiota shotgun metagenomics symbiont Jorge Doña Stephany Virrueta Herrera Tommi Nyman Mervi Kunnasranta Kevin P. Johnson Data_Sheet_5_Patterns of Microbiome Variation Among Infrapopulations of Permanent Bloodsucking Parasites.pdf |
topic_facet |
Microbiology Microbial Genetics Microbial Ecology Mycology genome-resolved metagenomics host-symbiont intraspecific variation lice microbiota shotgun metagenomics symbiont |
description |
While interspecific variation in microbiome composition can often be readily explained by factors such as host species identity, there is still limited knowledge of how microbiomes vary at scales lower than the species level (e.g., between individuals or populations). Here, we evaluated variation in microbiome composition of individual parasites among infrapopulations (i.e., populations of parasites of the same species living on a single host individual). To address this question, we used genome-resolved and shotgun metagenomic data of 17 infrapopulations (balanced design) of the permanent, bloodsucking seal louse Echinophthirius horridus sampled from individual Saimaa ringed seals Pusa hispida saimensis. Both genome-resolved and read-based metagenomic classification approaches consistently show that parasite infrapopulation identity is a significant factor that explains both qualitative and quantitative patterns of microbiome variation at the intraspecific level. This study contributes to the general understanding of the factors driving patterns of intraspecific variation in microbiome composition, especially of bloodsucking parasites, and has implications for understanding how well-known processes occurring at higher taxonomic levels, such as phylosymbiosis, might arise in these systems. |
format |
Dataset |
author |
Jorge Doña Stephany Virrueta Herrera Tommi Nyman Mervi Kunnasranta Kevin P. Johnson |
author_facet |
Jorge Doña Stephany Virrueta Herrera Tommi Nyman Mervi Kunnasranta Kevin P. Johnson |
author_sort |
Jorge Doña |
title |
Data_Sheet_5_Patterns of Microbiome Variation Among Infrapopulations of Permanent Bloodsucking Parasites.pdf |
title_short |
Data_Sheet_5_Patterns of Microbiome Variation Among Infrapopulations of Permanent Bloodsucking Parasites.pdf |
title_full |
Data_Sheet_5_Patterns of Microbiome Variation Among Infrapopulations of Permanent Bloodsucking Parasites.pdf |
title_fullStr |
Data_Sheet_5_Patterns of Microbiome Variation Among Infrapopulations of Permanent Bloodsucking Parasites.pdf |
title_full_unstemmed |
Data_Sheet_5_Patterns of Microbiome Variation Among Infrapopulations of Permanent Bloodsucking Parasites.pdf |
title_sort |
data_sheet_5_patterns of microbiome variation among infrapopulations of permanent bloodsucking parasites.pdf |
publishDate |
2021 |
url |
https://doi.org/10.3389/fmicb.2021.642543.s005 https://figshare.com/articles/dataset/Data_Sheet_5_Patterns_of_Microbiome_Variation_Among_Infrapopulations_of_Permanent_Bloodsucking_Parasites_pdf/14429756 |
genre |
Pusa hispida |
genre_facet |
Pusa hispida |
op_relation |
doi:10.3389/fmicb.2021.642543.s005 https://figshare.com/articles/dataset/Data_Sheet_5_Patterns_of_Microbiome_Variation_Among_Infrapopulations_of_Permanent_Bloodsucking_Parasites_pdf/14429756 |
op_rights |
CC BY 4.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.3389/fmicb.2021.642543.s005 |
_version_ |
1766174792809971712 |