Image_5_Spatial Heterogeneity of eDNA Transport Improves Stream Assessment of Threatened Salmon Presence, Abundance, and Location.pdf

The integration of environmental DNA (eDNA) within management strategies for lotic organisms requires translating eDNA detection and quantification data into inferences of the locations and abundances of target species. Understanding how eDNA is distributed in space and time within the complex envir...

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Main Authors: Zachary T. Wood, Anaïs Lacoursière-Roussel, Francis LeBlanc, Marc Trudel, Michael T. Kinnison, Colton Garry McBrine, Scott A. Pavey, Nellie Gagné
Format: Still Image
Language:unknown
Published: 2021
Subjects:
Online Access:https://doi.org/10.3389/fevo.2021.650717.s006
https://figshare.com/articles/figure/Image_5_Spatial_Heterogeneity_of_eDNA_Transport_Improves_Stream_Assessment_of_Threatened_Salmon_Presence_Abundance_and_Location_pdf/14313251
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spelling ftfrontimediafig:oai:figshare.com:article/14313251 2023-05-15T15:31:59+02:00 Image_5_Spatial Heterogeneity of eDNA Transport Improves Stream Assessment of Threatened Salmon Presence, Abundance, and Location.pdf Zachary T. Wood Anaïs Lacoursière-Roussel Francis LeBlanc Marc Trudel Michael T. Kinnison Colton Garry McBrine Scott A. Pavey Nellie Gagné 2021-03-26T04:22:35Z https://doi.org/10.3389/fevo.2021.650717.s006 https://figshare.com/articles/figure/Image_5_Spatial_Heterogeneity_of_eDNA_Transport_Improves_Stream_Assessment_of_Threatened_Salmon_Presence_Abundance_and_Location_pdf/14313251 unknown doi:10.3389/fevo.2021.650717.s006 https://figshare.com/articles/figure/Image_5_Spatial_Heterogeneity_of_eDNA_Transport_Improves_Stream_Assessment_of_Threatened_Salmon_Presence_Abundance_and_Location_pdf/14313251 CC BY 4.0 CC-BY Evolutionary Biology Ecology Invasive Species Ecology Landscape Ecology Conservation and Biodiversity Behavioural Ecology Community Ecology (excl. Invasive Species Ecology) Ecological Physiology Freshwater Ecology Marine and Estuarine Ecology (incl. Marine Ichthyology) Population Ecology Terrestrial Ecology water eDNA predictive model quantitative distribution assessment conservation Atlantic salmon lotic ecosystems fish detection Image Figure 2021 ftfrontimediafig https://doi.org/10.3389/fevo.2021.650717.s006 2021-03-31T22:59:56Z The integration of environmental DNA (eDNA) within management strategies for lotic organisms requires translating eDNA detection and quantification data into inferences of the locations and abundances of target species. Understanding how eDNA is distributed in space and time within the complex environments of rivers and streams is a major factor in achieving this translation. Here we study bidimensional eDNA signals in streams to predict the position and abundance of Atlantic salmon (Salmo salar) juveniles. We use data from sentinel cages with a range of abundances (3–63 juveniles) that were deployed in three coastal streams in New Brunswick, Canada. We evaluate the spatial patterns of eDNA dispersal and determine the effect of discharge on the dilution rate of eDNA. Our results show that eDNA exhibits predictable plume dynamics downstream from sources, with eDNA being initially concentrated and transported in the midstream, but eventually accumulating in stream margins with time and distance. From these findings we developed a fish detection and distribution prediction model based on the eDNA ratio in midstream versus bankside sites for a variety of fish distribution scenarios. Finally, we advise that sampling midstream at every 400 m is sufficient to detect a single fish at low velocity, but sampling efforts need to be increased at higher water velocity (every 100 m in the systems surveyed in this study). Studying salmon eDNA spatio-temporal patterns in lotic environments is essential to developing strong quantitative population assessment models that successfully leverage eDNA as a tool to protect salmon populations. Still Image Atlantic salmon Salmo salar Frontiers: Figshare Canada
institution Open Polar
collection Frontiers: Figshare
op_collection_id ftfrontimediafig
language unknown
topic Evolutionary Biology
Ecology
Invasive Species Ecology
Landscape Ecology
Conservation and Biodiversity
Behavioural Ecology
Community Ecology (excl. Invasive Species Ecology)
Ecological Physiology
Freshwater Ecology
Marine and Estuarine Ecology (incl. Marine Ichthyology)
Population Ecology
Terrestrial Ecology
water eDNA
predictive model
quantitative distribution assessment
conservation
Atlantic salmon
lotic ecosystems
fish detection
spellingShingle Evolutionary Biology
Ecology
Invasive Species Ecology
Landscape Ecology
Conservation and Biodiversity
Behavioural Ecology
Community Ecology (excl. Invasive Species Ecology)
Ecological Physiology
Freshwater Ecology
Marine and Estuarine Ecology (incl. Marine Ichthyology)
Population Ecology
Terrestrial Ecology
water eDNA
predictive model
quantitative distribution assessment
conservation
Atlantic salmon
lotic ecosystems
fish detection
Zachary T. Wood
Anaïs Lacoursière-Roussel
Francis LeBlanc
Marc Trudel
Michael T. Kinnison
Colton Garry McBrine
Scott A. Pavey
Nellie Gagné
Image_5_Spatial Heterogeneity of eDNA Transport Improves Stream Assessment of Threatened Salmon Presence, Abundance, and Location.pdf
topic_facet Evolutionary Biology
Ecology
Invasive Species Ecology
Landscape Ecology
Conservation and Biodiversity
Behavioural Ecology
Community Ecology (excl. Invasive Species Ecology)
Ecological Physiology
Freshwater Ecology
Marine and Estuarine Ecology (incl. Marine Ichthyology)
Population Ecology
Terrestrial Ecology
water eDNA
predictive model
quantitative distribution assessment
conservation
Atlantic salmon
lotic ecosystems
fish detection
description The integration of environmental DNA (eDNA) within management strategies for lotic organisms requires translating eDNA detection and quantification data into inferences of the locations and abundances of target species. Understanding how eDNA is distributed in space and time within the complex environments of rivers and streams is a major factor in achieving this translation. Here we study bidimensional eDNA signals in streams to predict the position and abundance of Atlantic salmon (Salmo salar) juveniles. We use data from sentinel cages with a range of abundances (3–63 juveniles) that were deployed in three coastal streams in New Brunswick, Canada. We evaluate the spatial patterns of eDNA dispersal and determine the effect of discharge on the dilution rate of eDNA. Our results show that eDNA exhibits predictable plume dynamics downstream from sources, with eDNA being initially concentrated and transported in the midstream, but eventually accumulating in stream margins with time and distance. From these findings we developed a fish detection and distribution prediction model based on the eDNA ratio in midstream versus bankside sites for a variety of fish distribution scenarios. Finally, we advise that sampling midstream at every 400 m is sufficient to detect a single fish at low velocity, but sampling efforts need to be increased at higher water velocity (every 100 m in the systems surveyed in this study). Studying salmon eDNA spatio-temporal patterns in lotic environments is essential to developing strong quantitative population assessment models that successfully leverage eDNA as a tool to protect salmon populations.
format Still Image
author Zachary T. Wood
Anaïs Lacoursière-Roussel
Francis LeBlanc
Marc Trudel
Michael T. Kinnison
Colton Garry McBrine
Scott A. Pavey
Nellie Gagné
author_facet Zachary T. Wood
Anaïs Lacoursière-Roussel
Francis LeBlanc
Marc Trudel
Michael T. Kinnison
Colton Garry McBrine
Scott A. Pavey
Nellie Gagné
author_sort Zachary T. Wood
title Image_5_Spatial Heterogeneity of eDNA Transport Improves Stream Assessment of Threatened Salmon Presence, Abundance, and Location.pdf
title_short Image_5_Spatial Heterogeneity of eDNA Transport Improves Stream Assessment of Threatened Salmon Presence, Abundance, and Location.pdf
title_full Image_5_Spatial Heterogeneity of eDNA Transport Improves Stream Assessment of Threatened Salmon Presence, Abundance, and Location.pdf
title_fullStr Image_5_Spatial Heterogeneity of eDNA Transport Improves Stream Assessment of Threatened Salmon Presence, Abundance, and Location.pdf
title_full_unstemmed Image_5_Spatial Heterogeneity of eDNA Transport Improves Stream Assessment of Threatened Salmon Presence, Abundance, and Location.pdf
title_sort image_5_spatial heterogeneity of edna transport improves stream assessment of threatened salmon presence, abundance, and location.pdf
publishDate 2021
url https://doi.org/10.3389/fevo.2021.650717.s006
https://figshare.com/articles/figure/Image_5_Spatial_Heterogeneity_of_eDNA_Transport_Improves_Stream_Assessment_of_Threatened_Salmon_Presence_Abundance_and_Location_pdf/14313251
geographic Canada
geographic_facet Canada
genre Atlantic salmon
Salmo salar
genre_facet Atlantic salmon
Salmo salar
op_relation doi:10.3389/fevo.2021.650717.s006
https://figshare.com/articles/figure/Image_5_Spatial_Heterogeneity_of_eDNA_Transport_Improves_Stream_Assessment_of_Threatened_Salmon_Presence_Abundance_and_Location_pdf/14313251
op_rights CC BY 4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.3389/fevo.2021.650717.s006
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