Image_2_A Previously Undescribed Helotialean Fungus That Is Superabundant in Soil Under Maritime Antarctic Higher Plants.JPEG

We report a previously undescribed member of the Helotiales that is superabundant in soils at two maritime Antarctic islands under Antarctic Hairgrass (Deschampsia antarctica Desv.). High throughput sequencing showed that up to 92% of DNA reads, and 68% of RNA reads, in soils from the islands were a...

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Main Authors: Kevin K. Newsham, Filipa Cox, Chester J. Sands, Mark H. Garnett, Naresh Magan, Claire A. Horrocks, Jennifer A. J. Dungait, Clare H. Robinson
Format: Still Image
Language:unknown
Published: 2020
Subjects:
13C
Online Access:https://doi.org/10.3389/fmicb.2020.615608.s002
https://figshare.com/articles/figure/Image_2_A_Previously_Undescribed_Helotialean_Fungus_That_Is_Superabundant_in_Soil_Under_Maritime_Antarctic_Higher_Plants_JPEG/13414139
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spelling ftfrontimediafig:oai:figshare.com:article/13414139 2023-05-15T13:30:57+02:00 Image_2_A Previously Undescribed Helotialean Fungus That Is Superabundant in Soil Under Maritime Antarctic Higher Plants.JPEG Kevin K. Newsham Filipa Cox Chester J. Sands Mark H. Garnett Naresh Magan Claire A. Horrocks Jennifer A. J. Dungait Clare H. Robinson 2020-12-18T04:34:38Z https://doi.org/10.3389/fmicb.2020.615608.s002 https://figshare.com/articles/figure/Image_2_A_Previously_Undescribed_Helotialean_Fungus_That_Is_Superabundant_in_Soil_Under_Maritime_Antarctic_Higher_Plants_JPEG/13414139 unknown doi:10.3389/fmicb.2020.615608.s002 https://figshare.com/articles/figure/Image_2_A_Previously_Undescribed_Helotialean_Fungus_That_Is_Superabundant_in_Soil_Under_Maritime_Antarctic_Higher_Plants_JPEG/13414139 CC BY 4.0 CC-BY Microbiology Microbial Genetics Microbial Ecology Mycology Antarctica 14C (or carbon-14) carbon 13C Chalara Helotiales Image Figure 2020 ftfrontimediafig https://doi.org/10.3389/fmicb.2020.615608.s002 2020-12-23T23:59:11Z We report a previously undescribed member of the Helotiales that is superabundant in soils at two maritime Antarctic islands under Antarctic Hairgrass (Deschampsia antarctica Desv.). High throughput sequencing showed that up to 92% of DNA reads, and 68% of RNA reads, in soils from the islands were accounted for by the fungus. Sequencing of the large subunit region of ribosomal (r)DNA places the fungus close to the Pezizellaceae, Porodiplodiaceae, and Sclerotiniaceae, with analyses of internal transcribed spacer regions of rDNA indicating that it has affinities to previously unnamed soil and root fungi from alpine, cool temperate and Low Arctic regions. The fungus was found to be most frequent in soils containing C aged to 1,000–1,200 years before present. The relative abundances of its DNA and RNA reads were positively associated with soil carbon and nitrogen concentrations and δ 13 C values, with the relative abundance of its DNA being negatively associated with soil pH value. An isolate of the fungus produces flask-shaped phialides with a pronounced venter bearing masses of conidia measuring 4.5–6(7) × 1.8–2.5 μm, suggestive of anamorphic Chalara. Enzymatic studies indicate that the isolate strongly synthesizes the extracellular enzyme acid phosphatase, and also exhibits alkaline phosphatase and naphthol-AS-BI-phosphohydrolase activities. Ecophysiological measurements indicate optimal hyphal growth of the isolate at a pH of 4.2–4.5 and a water potential of −0.66 MPa. The isolate is a psychrotroph, exhibiting measureable hyphal growth at −2°C, optimal hyphal extension rate at 15°C and negligible growth at 25°C. It is proposed that the rising temperatures that are predicted to occur in maritime Antarctica later this century will increase the growth rate of the fungus, with the potential loss of ancient C from soils. Analyses using the GlobalFungi Database indicate that the fungus is present in cold, acidic soils on all continents. We advocate further studies to identify whether it is superabundant in soils under ... Still Image Antarc* Antarctic Antarctica Arctic Frontiers: Figshare Arctic Antarctic
institution Open Polar
collection Frontiers: Figshare
op_collection_id ftfrontimediafig
language unknown
topic Microbiology
Microbial Genetics
Microbial Ecology
Mycology
Antarctica
14C (or carbon-14)
carbon
13C
Chalara
Helotiales
spellingShingle Microbiology
Microbial Genetics
Microbial Ecology
Mycology
Antarctica
14C (or carbon-14)
carbon
13C
Chalara
Helotiales
Kevin K. Newsham
Filipa Cox
Chester J. Sands
Mark H. Garnett
Naresh Magan
Claire A. Horrocks
Jennifer A. J. Dungait
Clare H. Robinson
Image_2_A Previously Undescribed Helotialean Fungus That Is Superabundant in Soil Under Maritime Antarctic Higher Plants.JPEG
topic_facet Microbiology
Microbial Genetics
Microbial Ecology
Mycology
Antarctica
14C (or carbon-14)
carbon
13C
Chalara
Helotiales
description We report a previously undescribed member of the Helotiales that is superabundant in soils at two maritime Antarctic islands under Antarctic Hairgrass (Deschampsia antarctica Desv.). High throughput sequencing showed that up to 92% of DNA reads, and 68% of RNA reads, in soils from the islands were accounted for by the fungus. Sequencing of the large subunit region of ribosomal (r)DNA places the fungus close to the Pezizellaceae, Porodiplodiaceae, and Sclerotiniaceae, with analyses of internal transcribed spacer regions of rDNA indicating that it has affinities to previously unnamed soil and root fungi from alpine, cool temperate and Low Arctic regions. The fungus was found to be most frequent in soils containing C aged to 1,000–1,200 years before present. The relative abundances of its DNA and RNA reads were positively associated with soil carbon and nitrogen concentrations and δ 13 C values, with the relative abundance of its DNA being negatively associated with soil pH value. An isolate of the fungus produces flask-shaped phialides with a pronounced venter bearing masses of conidia measuring 4.5–6(7) × 1.8–2.5 μm, suggestive of anamorphic Chalara. Enzymatic studies indicate that the isolate strongly synthesizes the extracellular enzyme acid phosphatase, and also exhibits alkaline phosphatase and naphthol-AS-BI-phosphohydrolase activities. Ecophysiological measurements indicate optimal hyphal growth of the isolate at a pH of 4.2–4.5 and a water potential of −0.66 MPa. The isolate is a psychrotroph, exhibiting measureable hyphal growth at −2°C, optimal hyphal extension rate at 15°C and negligible growth at 25°C. It is proposed that the rising temperatures that are predicted to occur in maritime Antarctica later this century will increase the growth rate of the fungus, with the potential loss of ancient C from soils. Analyses using the GlobalFungi Database indicate that the fungus is present in cold, acidic soils on all continents. We advocate further studies to identify whether it is superabundant in soils under ...
format Still Image
author Kevin K. Newsham
Filipa Cox
Chester J. Sands
Mark H. Garnett
Naresh Magan
Claire A. Horrocks
Jennifer A. J. Dungait
Clare H. Robinson
author_facet Kevin K. Newsham
Filipa Cox
Chester J. Sands
Mark H. Garnett
Naresh Magan
Claire A. Horrocks
Jennifer A. J. Dungait
Clare H. Robinson
author_sort Kevin K. Newsham
title Image_2_A Previously Undescribed Helotialean Fungus That Is Superabundant in Soil Under Maritime Antarctic Higher Plants.JPEG
title_short Image_2_A Previously Undescribed Helotialean Fungus That Is Superabundant in Soil Under Maritime Antarctic Higher Plants.JPEG
title_full Image_2_A Previously Undescribed Helotialean Fungus That Is Superabundant in Soil Under Maritime Antarctic Higher Plants.JPEG
title_fullStr Image_2_A Previously Undescribed Helotialean Fungus That Is Superabundant in Soil Under Maritime Antarctic Higher Plants.JPEG
title_full_unstemmed Image_2_A Previously Undescribed Helotialean Fungus That Is Superabundant in Soil Under Maritime Antarctic Higher Plants.JPEG
title_sort image_2_a previously undescribed helotialean fungus that is superabundant in soil under maritime antarctic higher plants.jpeg
publishDate 2020
url https://doi.org/10.3389/fmicb.2020.615608.s002
https://figshare.com/articles/figure/Image_2_A_Previously_Undescribed_Helotialean_Fungus_That_Is_Superabundant_in_Soil_Under_Maritime_Antarctic_Higher_Plants_JPEG/13414139
geographic Arctic
Antarctic
geographic_facet Arctic
Antarctic
genre Antarc*
Antarctic
Antarctica
Arctic
genre_facet Antarc*
Antarctic
Antarctica
Arctic
op_relation doi:10.3389/fmicb.2020.615608.s002
https://figshare.com/articles/figure/Image_2_A_Previously_Undescribed_Helotialean_Fungus_That_Is_Superabundant_in_Soil_Under_Maritime_Antarctic_Higher_Plants_JPEG/13414139
op_rights CC BY 4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.3389/fmicb.2020.615608.s002
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