Data_Sheet_1_Oceanographic Fronts Shape Phaeocystis Assemblages: A High-Resolution 18S rRNA Gene Survey From the Ice-Edge to the Equator of the South Pacific.zip

The cosmopolitan haptophyte Phaeocystis is recognized as a key contributor to marine biogeochemical cycling and important primary producer within polar marine environments. Yet, little is known about its solitary, non-colonial cell stages or its distribution during the colder, low-productivity seaso...

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Main Authors: Swan L. S. Sow, Thomas W. Trull, Levente Bodrossy
Format: Dataset
Language:unknown
Published: 2020
Subjects:
Online Access:https://doi.org/10.3389/fmicb.2020.01847.s001
https://figshare.com/articles/dataset/Data_Sheet_1_Oceanographic_Fronts_Shape_Phaeocystis_Assemblages_A_High-Resolution_18S_rRNA_Gene_Survey_From_the_Ice-Edge_to_the_Equator_of_the_South_Pacific_zip/12769415
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record_format openpolar
spelling ftfrontimediafig:oai:figshare.com:article/12769415 2023-05-15T14:04:09+02:00 Data_Sheet_1_Oceanographic Fronts Shape Phaeocystis Assemblages: A High-Resolution 18S rRNA Gene Survey From the Ice-Edge to the Equator of the South Pacific.zip Swan L. S. Sow Thomas W. Trull Levente Bodrossy 2020-08-06T04:32:33Z https://doi.org/10.3389/fmicb.2020.01847.s001 https://figshare.com/articles/dataset/Data_Sheet_1_Oceanographic_Fronts_Shape_Phaeocystis_Assemblages_A_High-Resolution_18S_rRNA_Gene_Survey_From_the_Ice-Edge_to_the_Equator_of_the_South_Pacific_zip/12769415 unknown doi:10.3389/fmicb.2020.01847.s001 https://figshare.com/articles/dataset/Data_Sheet_1_Oceanographic_Fronts_Shape_Phaeocystis_Assemblages_A_High-Resolution_18S_rRNA_Gene_Survey_From_the_Ice-Edge_to_the_Equator_of_the_South_Pacific_zip/12769415 Microbiology Microbial Genetics Microbial Ecology Mycology haptophytes Phaeocystis Southern Ocean oceanographic fronts winter distribution 18S (SSU) rRNA gene latitudinal diversity gradient amplicon sequence variants Dataset 2020 ftfrontimediafig https://doi.org/10.3389/fmicb.2020.01847.s001 2020-08-12T22:56:30Z The cosmopolitan haptophyte Phaeocystis is recognized as a key contributor to marine biogeochemical cycling and important primary producer within polar marine environments. Yet, little is known about its solitary, non-colonial cell stages or its distribution during the colder, low-productivity seasons. We examined the biogeography of Phaeocystis along a high-resolution (0.5-degree latitudinal interval) transect from the Antarctic ice-edge to the equator of the South Pacific, in the austral autumn-winter. Using high-throughput 18S rRNA gene sequences with single nucleotide variable (zero-radius) operational taxonomic units (zOTUs) allowed us to explore the possibility of strain-level variation. From water samples within the upper water column, we show the presence of an abundant Phaeocystis assemblage that persisted during the colder months, contributing up to 9% of the microbial eukaryote community at high latitudes. The biogeography of Phaeocystis was strongly shaped by oceanographic boundaries, most prominently the polar and subantarctic fronts. Marked changes in dominant Phaeocystis antarctica zOTUs between different frontal zones support the concept that ecotypes may exist within the Phaeocystis assemblage. Our findings also show that the Phaeocystis assemblage did not abide by the classical latitudinal diversity gradient of increasing richness from the poles to the tropics; richness peaked at 30°S and declined to a minimum at 5°S. Another surprise was that P. globosa and P. cordata, previously thought to be restricted to the northern hemisphere, were detected at moderate abundances within the Southern Ocean. Our results emphasize the importance of oceanographic processes in shaping the biogeography of Phaeocystis and highlights the importance of genomics-based exploration of Phaeocystis, which have found the assemblage to be more complex than previously understood. The high winter relative abundance of the Phaeocystis assemblage suggests it could be involved in more complex ecological interactions during ... Dataset Antarc* Antarctic Antarctica Southern Ocean Frontiers: Figshare Antarctic Southern Ocean The Antarctic Austral Pacific
institution Open Polar
collection Frontiers: Figshare
op_collection_id ftfrontimediafig
language unknown
topic Microbiology
Microbial Genetics
Microbial Ecology
Mycology
haptophytes
Phaeocystis
Southern Ocean
oceanographic fronts
winter distribution
18S (SSU) rRNA gene
latitudinal diversity gradient
amplicon sequence variants
spellingShingle Microbiology
Microbial Genetics
Microbial Ecology
Mycology
haptophytes
Phaeocystis
Southern Ocean
oceanographic fronts
winter distribution
18S (SSU) rRNA gene
latitudinal diversity gradient
amplicon sequence variants
Swan L. S. Sow
Thomas W. Trull
Levente Bodrossy
Data_Sheet_1_Oceanographic Fronts Shape Phaeocystis Assemblages: A High-Resolution 18S rRNA Gene Survey From the Ice-Edge to the Equator of the South Pacific.zip
topic_facet Microbiology
Microbial Genetics
Microbial Ecology
Mycology
haptophytes
Phaeocystis
Southern Ocean
oceanographic fronts
winter distribution
18S (SSU) rRNA gene
latitudinal diversity gradient
amplicon sequence variants
description The cosmopolitan haptophyte Phaeocystis is recognized as a key contributor to marine biogeochemical cycling and important primary producer within polar marine environments. Yet, little is known about its solitary, non-colonial cell stages or its distribution during the colder, low-productivity seasons. We examined the biogeography of Phaeocystis along a high-resolution (0.5-degree latitudinal interval) transect from the Antarctic ice-edge to the equator of the South Pacific, in the austral autumn-winter. Using high-throughput 18S rRNA gene sequences with single nucleotide variable (zero-radius) operational taxonomic units (zOTUs) allowed us to explore the possibility of strain-level variation. From water samples within the upper water column, we show the presence of an abundant Phaeocystis assemblage that persisted during the colder months, contributing up to 9% of the microbial eukaryote community at high latitudes. The biogeography of Phaeocystis was strongly shaped by oceanographic boundaries, most prominently the polar and subantarctic fronts. Marked changes in dominant Phaeocystis antarctica zOTUs between different frontal zones support the concept that ecotypes may exist within the Phaeocystis assemblage. Our findings also show that the Phaeocystis assemblage did not abide by the classical latitudinal diversity gradient of increasing richness from the poles to the tropics; richness peaked at 30°S and declined to a minimum at 5°S. Another surprise was that P. globosa and P. cordata, previously thought to be restricted to the northern hemisphere, were detected at moderate abundances within the Southern Ocean. Our results emphasize the importance of oceanographic processes in shaping the biogeography of Phaeocystis and highlights the importance of genomics-based exploration of Phaeocystis, which have found the assemblage to be more complex than previously understood. The high winter relative abundance of the Phaeocystis assemblage suggests it could be involved in more complex ecological interactions during ...
format Dataset
author Swan L. S. Sow
Thomas W. Trull
Levente Bodrossy
author_facet Swan L. S. Sow
Thomas W. Trull
Levente Bodrossy
author_sort Swan L. S. Sow
title Data_Sheet_1_Oceanographic Fronts Shape Phaeocystis Assemblages: A High-Resolution 18S rRNA Gene Survey From the Ice-Edge to the Equator of the South Pacific.zip
title_short Data_Sheet_1_Oceanographic Fronts Shape Phaeocystis Assemblages: A High-Resolution 18S rRNA Gene Survey From the Ice-Edge to the Equator of the South Pacific.zip
title_full Data_Sheet_1_Oceanographic Fronts Shape Phaeocystis Assemblages: A High-Resolution 18S rRNA Gene Survey From the Ice-Edge to the Equator of the South Pacific.zip
title_fullStr Data_Sheet_1_Oceanographic Fronts Shape Phaeocystis Assemblages: A High-Resolution 18S rRNA Gene Survey From the Ice-Edge to the Equator of the South Pacific.zip
title_full_unstemmed Data_Sheet_1_Oceanographic Fronts Shape Phaeocystis Assemblages: A High-Resolution 18S rRNA Gene Survey From the Ice-Edge to the Equator of the South Pacific.zip
title_sort data_sheet_1_oceanographic fronts shape phaeocystis assemblages: a high-resolution 18s rrna gene survey from the ice-edge to the equator of the south pacific.zip
publishDate 2020
url https://doi.org/10.3389/fmicb.2020.01847.s001
https://figshare.com/articles/dataset/Data_Sheet_1_Oceanographic_Fronts_Shape_Phaeocystis_Assemblages_A_High-Resolution_18S_rRNA_Gene_Survey_From_the_Ice-Edge_to_the_Equator_of_the_South_Pacific_zip/12769415
geographic Antarctic
Southern Ocean
The Antarctic
Austral
Pacific
geographic_facet Antarctic
Southern Ocean
The Antarctic
Austral
Pacific
genre Antarc*
Antarctic
Antarctica
Southern Ocean
genre_facet Antarc*
Antarctic
Antarctica
Southern Ocean
op_relation doi:10.3389/fmicb.2020.01847.s001
https://figshare.com/articles/dataset/Data_Sheet_1_Oceanographic_Fronts_Shape_Phaeocystis_Assemblages_A_High-Resolution_18S_rRNA_Gene_Survey_From_the_Ice-Edge_to_the_Equator_of_the_South_Pacific_zip/12769415
op_doi https://doi.org/10.3389/fmicb.2020.01847.s001
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