Data_Sheet_1_Inoculation With Desulfovibrio sp. Does Not Enhance Chalk Formation in the Pacific Oyster.PDF

Some oyster species precipitate a soft, friable form of calcite that is occluded within their shells, often referred to as chalk or chalky deposits. Because of the unusual microstructure of this shell feature, it has been proposed that chalk is the result of microbial involvement in the calcificatio...

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Main Authors: Roxanne M. W. Banker, David Coil
Format: Dataset
Language:unknown
Published: 2020
Subjects:
Online Access:https://doi.org/10.3389/fmars.2020.00407.s001
https://figshare.com/articles/Data_Sheet_1_Inoculation_With_Desulfovibrio_sp_Does_Not_Enhance_Chalk_Formation_in_the_Pacific_Oyster_PDF/12457793
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spelling ftfrontimediafig:oai:figshare.com:article/12457793 2023-05-15T17:54:18+02:00 Data_Sheet_1_Inoculation With Desulfovibrio sp. Does Not Enhance Chalk Formation in the Pacific Oyster.PDF Roxanne M. W. Banker David Coil 2020-06-10T04:40:24Z https://doi.org/10.3389/fmars.2020.00407.s001 https://figshare.com/articles/Data_Sheet_1_Inoculation_With_Desulfovibrio_sp_Does_Not_Enhance_Chalk_Formation_in_the_Pacific_Oyster_PDF/12457793 unknown doi:10.3389/fmars.2020.00407.s001 https://figshare.com/articles/Data_Sheet_1_Inoculation_With_Desulfovibrio_sp_Does_Not_Enhance_Chalk_Formation_in_the_Pacific_Oyster_PDF/12457793 CC BY 4.0 CC-BY Oceanography Marine Biology Marine Geoscience Biological Oceanography Chemical Oceanography Physical Oceanography Marine Engineering pacific oyster chalk sulfate-reducing bacteria calcification shell formation Dataset 2020 ftfrontimediafig https://doi.org/10.3389/fmars.2020.00407.s001 2020-06-10T22:53:38Z Some oyster species precipitate a soft, friable form of calcite that is occluded within their shells, often referred to as chalk or chalky deposits. Because of the unusual microstructure of this shell feature, it has been proposed that chalk is the result of microbial involvement in the calcification process. Specifically, chalk has been hypothesized to be induced or influenced by microbial sulfate-reduction, and therefore chalk formation may not be under direct control of the oysters themselves. Specimens of the Pacific oyster, Magallana gigas, well-known for chalk deposition within shells, were grown in Bodega Harbor, Bodega Bay, California, and exposed monthly to treatments that altered the abundance of sulfate-reducing bacteria within oysters. The four treatment conditions evaluated included a control group (not exposed to any reagents), as well as oysters exposed to ciprofloxacin (a broad spectrum antibiotic), sodium molybdate (a compound known to inhibit bacterial sulfate reduction), and an inoculum of a sulfate-reducing bacterium isolated for this study. At the end of a 7 month growing period, specimens were culled and shells from treatment groups were assessed for chalk content by measuring bulk shell density and percentage of chalk in a cross sectional area. While analyses show that treatment conditions were successful with respect to altering abundances of sulfate-reducing bacteria in oysters, increasing SRB populations did not correlate to enhanced chalk expression in oyster shells. Interestingly, control oysters produced more chalk than the other treatment groups, according to both bulk shell density and percent chalk measured in cross section. Given that control oysters represent the wild type for chalk expression in shells, it is inferred that the decreased formation of chalk in the other groups was due to a perturbation of the microbiome in the oyster calcifying fluid. However, the methods used here only quantify the presence of sulfate-reducing bacteria in oysters, and therefore, additional work ... Dataset Pacific oyster Frontiers: Figshare Pacific
institution Open Polar
collection Frontiers: Figshare
op_collection_id ftfrontimediafig
language unknown
topic Oceanography
Marine Biology
Marine Geoscience
Biological Oceanography
Chemical Oceanography
Physical Oceanography
Marine Engineering
pacific oyster
chalk
sulfate-reducing bacteria
calcification
shell formation
spellingShingle Oceanography
Marine Biology
Marine Geoscience
Biological Oceanography
Chemical Oceanography
Physical Oceanography
Marine Engineering
pacific oyster
chalk
sulfate-reducing bacteria
calcification
shell formation
Roxanne M. W. Banker
David Coil
Data_Sheet_1_Inoculation With Desulfovibrio sp. Does Not Enhance Chalk Formation in the Pacific Oyster.PDF
topic_facet Oceanography
Marine Biology
Marine Geoscience
Biological Oceanography
Chemical Oceanography
Physical Oceanography
Marine Engineering
pacific oyster
chalk
sulfate-reducing bacteria
calcification
shell formation
description Some oyster species precipitate a soft, friable form of calcite that is occluded within their shells, often referred to as chalk or chalky deposits. Because of the unusual microstructure of this shell feature, it has been proposed that chalk is the result of microbial involvement in the calcification process. Specifically, chalk has been hypothesized to be induced or influenced by microbial sulfate-reduction, and therefore chalk formation may not be under direct control of the oysters themselves. Specimens of the Pacific oyster, Magallana gigas, well-known for chalk deposition within shells, were grown in Bodega Harbor, Bodega Bay, California, and exposed monthly to treatments that altered the abundance of sulfate-reducing bacteria within oysters. The four treatment conditions evaluated included a control group (not exposed to any reagents), as well as oysters exposed to ciprofloxacin (a broad spectrum antibiotic), sodium molybdate (a compound known to inhibit bacterial sulfate reduction), and an inoculum of a sulfate-reducing bacterium isolated for this study. At the end of a 7 month growing period, specimens were culled and shells from treatment groups were assessed for chalk content by measuring bulk shell density and percentage of chalk in a cross sectional area. While analyses show that treatment conditions were successful with respect to altering abundances of sulfate-reducing bacteria in oysters, increasing SRB populations did not correlate to enhanced chalk expression in oyster shells. Interestingly, control oysters produced more chalk than the other treatment groups, according to both bulk shell density and percent chalk measured in cross section. Given that control oysters represent the wild type for chalk expression in shells, it is inferred that the decreased formation of chalk in the other groups was due to a perturbation of the microbiome in the oyster calcifying fluid. However, the methods used here only quantify the presence of sulfate-reducing bacteria in oysters, and therefore, additional work ...
format Dataset
author Roxanne M. W. Banker
David Coil
author_facet Roxanne M. W. Banker
David Coil
author_sort Roxanne M. W. Banker
title Data_Sheet_1_Inoculation With Desulfovibrio sp. Does Not Enhance Chalk Formation in the Pacific Oyster.PDF
title_short Data_Sheet_1_Inoculation With Desulfovibrio sp. Does Not Enhance Chalk Formation in the Pacific Oyster.PDF
title_full Data_Sheet_1_Inoculation With Desulfovibrio sp. Does Not Enhance Chalk Formation in the Pacific Oyster.PDF
title_fullStr Data_Sheet_1_Inoculation With Desulfovibrio sp. Does Not Enhance Chalk Formation in the Pacific Oyster.PDF
title_full_unstemmed Data_Sheet_1_Inoculation With Desulfovibrio sp. Does Not Enhance Chalk Formation in the Pacific Oyster.PDF
title_sort data_sheet_1_inoculation with desulfovibrio sp. does not enhance chalk formation in the pacific oyster.pdf
publishDate 2020
url https://doi.org/10.3389/fmars.2020.00407.s001
https://figshare.com/articles/Data_Sheet_1_Inoculation_With_Desulfovibrio_sp_Does_Not_Enhance_Chalk_Formation_in_the_Pacific_Oyster_PDF/12457793
geographic Pacific
geographic_facet Pacific
genre Pacific oyster
genre_facet Pacific oyster
op_relation doi:10.3389/fmars.2020.00407.s001
https://figshare.com/articles/Data_Sheet_1_Inoculation_With_Desulfovibrio_sp_Does_Not_Enhance_Chalk_Formation_in_the_Pacific_Oyster_PDF/12457793
op_rights CC BY 4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.3389/fmars.2020.00407.s001
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