Comparison Of Microbiomes Of Cold-water Corals Primnoa Pacifica And Primnoa Resedaeformis, With Possible Link Between Microbiome Composition And Host Genotype
Cold-water corals provide critical habitats for a multitude of marine species, but are understudied relative to tropical corals. Primnoa pacifica is a cold-water coral prevalent throughout Alaskan waters, while another species in the genus, Primnoa resedaeformis, is widely distributed in the Atlanti...
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ftfloridasu:oai:diginole.lib.fsu.edu:fsu_608005 2024-06-09T07:47:36+00:00 Comparison Of Microbiomes Of Cold-water Corals Primnoa Pacifica And Primnoa Resedaeformis, With Possible Link Between Microbiome Composition And Host Genotype Goldsmith, Dawn B. (authoraut) Kellogg, Christina A. (authoraut) Morrison, Cheryl L. (authoraut) Gray, Michael A. (authoraut) Stone, Robert P. (authoraut) Waller, Rhian G. (authoraut) Brooke, Sandra D. (authoraut) Ross, Steve W. (authoraut) 2018-08-17 1 online resource computer https://diginole.lib.fsu.edu/islandora/object/fsu%3A608005/datastream/TN/view/Comparison%20Of%20Microbiomes%20Of%20Cold-water%20Corals%20Primnoa%20Pacifica%20And%20Primnoa%20Resedaeformis,%20With%20Possible%20Link%20Between%20Microbiome%20Composition%20And%20Host%20Genotype.jpg English eng eng Scientific Reports--2045-2322 fsu:608005 (IID) FSU_libsubv1_wos_000441876700086 (DOI) 10.1038/s41598-018-30901-z https://diginole.lib.fsu.edu/islandora/object/fsu%3A608005/datastream/TN/view/Comparison%20Of%20Microbiomes%20Of%20Cold-water%20Corals%20Primnoa%20Pacifica%20And%20Primnoa%20Resedaeformis,%20With%20Possible%20Link%20Between%20Microbiome%20Composition%20And%20Host%20Genotype.jpg Text journal article 2018 ftfloridasu 2024-05-10T08:08:13Z Cold-water corals provide critical habitats for a multitude of marine species, but are understudied relative to tropical corals. Primnoa pacifica is a cold-water coral prevalent throughout Alaskan waters, while another species in the genus, Primnoa resedaeformis, is widely distributed in the Atlantic Ocean. This study examined the V4-V5 region of the 16S rRNA gene after amplifying and pyrosequencing bacterial DNA from samples of these species. Key differences between the two species' microbiomes included a robust presence of bacteria belonging to the Chlamydiales order in most of the P. pacifica samples, whereas no more than 2% of any microbial community from P. resedaeformis comprised these bacteria. Microbiomes of P. resedaeformis exhibited higher diversity than those of P. pacifica, and the two species largely clustered separately in a principal coordinate analysis. Comparison of P. resedaeformis microbiomes from samples collected in two submarine canyons revealed a significant difference between locations. This finding mirrored significant genetic differences among the P. resedaeformis from the two canyons based upon population genetic analysis of microsatellite loci. This study presents the first report of microbiomes associated with these two coral species. Keywords: lophelia-pertusa, acropora-cervicornis, aleutian islands, biosurfactant production, core microbiome, depth distribution, mid-atlantic bight, mussismilia-hispida, nitrogen-fixing bacteria, population-structure Publication Note: The publisher’s version of record is available at https://doi.org/10.1038/s41598-018-30901-z Article in Journal/Newspaper Lophelia pertusa Aleutian Islands Florida State University: DigiNole Commons |
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Open Polar |
collection |
Florida State University: DigiNole Commons |
op_collection_id |
ftfloridasu |
language |
English |
description |
Cold-water corals provide critical habitats for a multitude of marine species, but are understudied relative to tropical corals. Primnoa pacifica is a cold-water coral prevalent throughout Alaskan waters, while another species in the genus, Primnoa resedaeformis, is widely distributed in the Atlantic Ocean. This study examined the V4-V5 region of the 16S rRNA gene after amplifying and pyrosequencing bacterial DNA from samples of these species. Key differences between the two species' microbiomes included a robust presence of bacteria belonging to the Chlamydiales order in most of the P. pacifica samples, whereas no more than 2% of any microbial community from P. resedaeformis comprised these bacteria. Microbiomes of P. resedaeformis exhibited higher diversity than those of P. pacifica, and the two species largely clustered separately in a principal coordinate analysis. Comparison of P. resedaeformis microbiomes from samples collected in two submarine canyons revealed a significant difference between locations. This finding mirrored significant genetic differences among the P. resedaeformis from the two canyons based upon population genetic analysis of microsatellite loci. This study presents the first report of microbiomes associated with these two coral species. Keywords: lophelia-pertusa, acropora-cervicornis, aleutian islands, biosurfactant production, core microbiome, depth distribution, mid-atlantic bight, mussismilia-hispida, nitrogen-fixing bacteria, population-structure Publication Note: The publisher’s version of record is available at https://doi.org/10.1038/s41598-018-30901-z |
author2 |
Goldsmith, Dawn B. (authoraut) Kellogg, Christina A. (authoraut) Morrison, Cheryl L. (authoraut) Gray, Michael A. (authoraut) Stone, Robert P. (authoraut) Waller, Rhian G. (authoraut) Brooke, Sandra D. (authoraut) Ross, Steve W. (authoraut) |
format |
Article in Journal/Newspaper |
title |
Comparison Of Microbiomes Of Cold-water Corals Primnoa Pacifica And Primnoa Resedaeformis, With Possible Link Between Microbiome Composition And Host Genotype |
spellingShingle |
Comparison Of Microbiomes Of Cold-water Corals Primnoa Pacifica And Primnoa Resedaeformis, With Possible Link Between Microbiome Composition And Host Genotype |
title_short |
Comparison Of Microbiomes Of Cold-water Corals Primnoa Pacifica And Primnoa Resedaeformis, With Possible Link Between Microbiome Composition And Host Genotype |
title_full |
Comparison Of Microbiomes Of Cold-water Corals Primnoa Pacifica And Primnoa Resedaeformis, With Possible Link Between Microbiome Composition And Host Genotype |
title_fullStr |
Comparison Of Microbiomes Of Cold-water Corals Primnoa Pacifica And Primnoa Resedaeformis, With Possible Link Between Microbiome Composition And Host Genotype |
title_full_unstemmed |
Comparison Of Microbiomes Of Cold-water Corals Primnoa Pacifica And Primnoa Resedaeformis, With Possible Link Between Microbiome Composition And Host Genotype |
title_sort |
comparison of microbiomes of cold-water corals primnoa pacifica and primnoa resedaeformis, with possible link between microbiome composition and host genotype |
publishDate |
2018 |
url |
https://diginole.lib.fsu.edu/islandora/object/fsu%3A608005/datastream/TN/view/Comparison%20Of%20Microbiomes%20Of%20Cold-water%20Corals%20Primnoa%20Pacifica%20And%20Primnoa%20Resedaeformis,%20With%20Possible%20Link%20Between%20Microbiome%20Composition%20And%20Host%20Genotype.jpg |
genre |
Lophelia pertusa Aleutian Islands |
genre_facet |
Lophelia pertusa Aleutian Islands |
op_relation |
Scientific Reports--2045-2322 fsu:608005 (IID) FSU_libsubv1_wos_000441876700086 (DOI) 10.1038/s41598-018-30901-z https://diginole.lib.fsu.edu/islandora/object/fsu%3A608005/datastream/TN/view/Comparison%20Of%20Microbiomes%20Of%20Cold-water%20Corals%20Primnoa%20Pacifica%20And%20Primnoa%20Resedaeformis,%20With%20Possible%20Link%20Between%20Microbiome%20Composition%20And%20Host%20Genotype.jpg |
_version_ |
1801378810621329408 |