Genetic Homogeneity Of The Invasive Lionfish Across The Northwestern Atlantic And The Gulf Of Mexico Based On Single Nucleotide Polymorphisms

Despite the devastating impact of the lionfish (Pterois volitans) invasion on NW Atlantic ecosystems, little genetic information about the invasion process is available. We applied Genotyping by Sequencing techniques to identify 1,220 single nucleotide polymorphic sites (SNPs) from 162 lionfish samp...

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Other Authors: Perez-Portela, R. (authoraut), Bumford, A. (authoraut), Coffman, B. (authoraut), Wedelich, S. (authoraut), Davenport, M. (authoraut), Fogg, A. (authoraut), Swenarton, M. K. (authoraut), Coleman, F. (authoraut), Johnston, M. A. (authoraut), Crawford, D. L. (authoraut), Oleksiak, M. F. (authoraut)
Format: Article in Journal/Newspaper
Language:English
Published: 2018
Subjects:
Online Access:https://diginole.lib.fsu.edu/islandora/object/fsu%3A605054/datastream/TN/view/Genetic%20Homogeneity%20Of%20The%20Invasive%20Lionfish%20Across%20The%20Northwestern%20Atlantic%20And%20The%20Gulf%20Of%20Mexico%20Based%20On%20Single%20Nucleotide%20Polymorphisms.jpg
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spelling ftfloridasu:oai:diginole.lib.fsu.edu:fsu_605054 2024-06-09T07:48:16+00:00 Genetic Homogeneity Of The Invasive Lionfish Across The Northwestern Atlantic And The Gulf Of Mexico Based On Single Nucleotide Polymorphisms Perez-Portela, R. (authoraut) Bumford, A. (authoraut) Coffman, B. (authoraut) Wedelich, S. (authoraut) Davenport, M. (authoraut) Fogg, A. (authoraut) Swenarton, M. K. (authoraut) Coleman, F. (authoraut) Johnston, M. A. (authoraut) Crawford, D. L. (authoraut) Oleksiak, M. F. (authoraut) 2018-03-22 1 online resource computer https://diginole.lib.fsu.edu/islandora/object/fsu%3A605054/datastream/TN/view/Genetic%20Homogeneity%20Of%20The%20Invasive%20Lionfish%20Across%20The%20Northwestern%20Atlantic%20And%20The%20Gulf%20Of%20Mexico%20Based%20On%20Single%20Nucleotide%20Polymorphisms.jpg English eng eng Scientific Reports--2045-2322 fsu:605054 (IID) FSU_libsubv1_wos_000428034400013 (DOI) 10.1038/s41598-018-23339-w https://diginole.lib.fsu.edu/islandora/object/fsu%3A605054/datastream/TN/view/Genetic%20Homogeneity%20Of%20The%20Invasive%20Lionfish%20Across%20The%20Northwestern%20Atlantic%20And%20The%20Gulf%20Of%20Mexico%20Based%20On%20Single%20Nucleotide%20Polymorphisms.jpg Text journal article 2018 ftfloridasu 2024-05-10T08:08:11Z Despite the devastating impact of the lionfish (Pterois volitans) invasion on NW Atlantic ecosystems, little genetic information about the invasion process is available. We applied Genotyping by Sequencing techniques to identify 1,220 single nucleotide polymorphic sites (SNPs) from 162 lionfish samples collected between 2013 and 2015 from two areas chronologically identified as the first and last invaded areas in US waters: the east coast of Florida and the Gulf of Mexico. We used population genomic analyses, including phylogenetic reconstruction, Bayesian clustering, genetic distances, Discriminant Analyses of Principal Components, and coalescence simulations for detection of outlier SNPs, to understand genetic trends relevant to the lionfish's long-term persistence. We found no significant differences in genetic structure or diversity between the two areas (F-ST p-values > 0.01, and t-test p-values > 0.05). In fact, our genomic analyses showed genetic homogeneity, with enough gene flow between the east coast of Florida and Gulf of Mexico to erase previous signals of genetic divergence detected between these areas, secondary spreading, and bottlenecks in the Gulf of Mexico. These findings suggest rapid genetic changes over space and time during the invasion, resulting in one panmictic population with no signs of divergence between areas due to local adaptation. Keywords: selection, biological invasion, botryllus-schlosseri, indo-pacific lionfish, miles bennett, mitochondrial, nuclear discordance, pterois-volitans, sequencing reveals, western north-atlantic Publication Note: The publisher's version of record is available at https://doi.org/10.1038/s41598-018-23339-w Article in Journal/Newspaper North Atlantic Florida State University: DigiNole Commons Pacific
institution Open Polar
collection Florida State University: DigiNole Commons
op_collection_id ftfloridasu
language English
description Despite the devastating impact of the lionfish (Pterois volitans) invasion on NW Atlantic ecosystems, little genetic information about the invasion process is available. We applied Genotyping by Sequencing techniques to identify 1,220 single nucleotide polymorphic sites (SNPs) from 162 lionfish samples collected between 2013 and 2015 from two areas chronologically identified as the first and last invaded areas in US waters: the east coast of Florida and the Gulf of Mexico. We used population genomic analyses, including phylogenetic reconstruction, Bayesian clustering, genetic distances, Discriminant Analyses of Principal Components, and coalescence simulations for detection of outlier SNPs, to understand genetic trends relevant to the lionfish's long-term persistence. We found no significant differences in genetic structure or diversity between the two areas (F-ST p-values > 0.01, and t-test p-values > 0.05). In fact, our genomic analyses showed genetic homogeneity, with enough gene flow between the east coast of Florida and Gulf of Mexico to erase previous signals of genetic divergence detected between these areas, secondary spreading, and bottlenecks in the Gulf of Mexico. These findings suggest rapid genetic changes over space and time during the invasion, resulting in one panmictic population with no signs of divergence between areas due to local adaptation. Keywords: selection, biological invasion, botryllus-schlosseri, indo-pacific lionfish, miles bennett, mitochondrial, nuclear discordance, pterois-volitans, sequencing reveals, western north-atlantic Publication Note: The publisher's version of record is available at https://doi.org/10.1038/s41598-018-23339-w
author2 Perez-Portela, R. (authoraut)
Bumford, A. (authoraut)
Coffman, B. (authoraut)
Wedelich, S. (authoraut)
Davenport, M. (authoraut)
Fogg, A. (authoraut)
Swenarton, M. K. (authoraut)
Coleman, F. (authoraut)
Johnston, M. A. (authoraut)
Crawford, D. L. (authoraut)
Oleksiak, M. F. (authoraut)
format Article in Journal/Newspaper
title Genetic Homogeneity Of The Invasive Lionfish Across The Northwestern Atlantic And The Gulf Of Mexico Based On Single Nucleotide Polymorphisms
spellingShingle Genetic Homogeneity Of The Invasive Lionfish Across The Northwestern Atlantic And The Gulf Of Mexico Based On Single Nucleotide Polymorphisms
title_short Genetic Homogeneity Of The Invasive Lionfish Across The Northwestern Atlantic And The Gulf Of Mexico Based On Single Nucleotide Polymorphisms
title_full Genetic Homogeneity Of The Invasive Lionfish Across The Northwestern Atlantic And The Gulf Of Mexico Based On Single Nucleotide Polymorphisms
title_fullStr Genetic Homogeneity Of The Invasive Lionfish Across The Northwestern Atlantic And The Gulf Of Mexico Based On Single Nucleotide Polymorphisms
title_full_unstemmed Genetic Homogeneity Of The Invasive Lionfish Across The Northwestern Atlantic And The Gulf Of Mexico Based On Single Nucleotide Polymorphisms
title_sort genetic homogeneity of the invasive lionfish across the northwestern atlantic and the gulf of mexico based on single nucleotide polymorphisms
publishDate 2018
url https://diginole.lib.fsu.edu/islandora/object/fsu%3A605054/datastream/TN/view/Genetic%20Homogeneity%20Of%20The%20Invasive%20Lionfish%20Across%20The%20Northwestern%20Atlantic%20And%20The%20Gulf%20Of%20Mexico%20Based%20On%20Single%20Nucleotide%20Polymorphisms.jpg
geographic Pacific
geographic_facet Pacific
genre North Atlantic
genre_facet North Atlantic
op_relation Scientific Reports--2045-2322
fsu:605054
(IID) FSU_libsubv1_wos_000428034400013
(DOI) 10.1038/s41598-018-23339-w
https://diginole.lib.fsu.edu/islandora/object/fsu%3A605054/datastream/TN/view/Genetic%20Homogeneity%20Of%20The%20Invasive%20Lionfish%20Across%20The%20Northwestern%20Atlantic%20And%20The%20Gulf%20Of%20Mexico%20Based%20On%20Single%20Nucleotide%20Polymorphisms.jpg
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