Assessment of Coralline Species Diversity in the European Coasts Supported by Sequencing of Type Material: The Case Study of Lithophyllum nitorum (Corallinales, Rhodophyta)

International audience A constant effort in sequencing an extensive number of specimens originating from comprehensive sampling had return an unprecedented amount of information fostering our understanding of diversity, evolution and distribution of coralline algae; however, many sequences lack reli...

Full description

Bibliographic Details
Published in:Cryptogamie, Algologie
Main Authors: Pena, Viviana, Hernandez-Kantun, Jazmin, J, Adey, Walter, H, Gall, Line Le
Other Authors: Institut de Systématique, Evolution, Biodiversité (ISYEB ), Muséum national d'Histoire naturelle (MNHN)-Université Pierre et Marie Curie - Paris 6 (UPMC)-École Pratique des Hautes Études (EPHE), Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Centre National de la Recherche Scientifique (CNRS)
Format: Article in Journal/Newspaper
Language:English
Published: HAL CCSD 2018
Subjects:
Online Access:https://hal.sorbonne-universite.fr/hal-01787113
https://hal.sorbonne-universite.fr/hal-01787113/document
https://hal.sorbonne-universite.fr/hal-01787113/file/FREIRE%20PENA_Viviana.pdf
https://doi.org/10.7872/crya/v39.iss1.2018.123
id ftecolephe:oai:HAL:hal-01787113v1
record_format openpolar
spelling ftecolephe:oai:HAL:hal-01787113v1 2024-05-19T07:45:37+00:00 Assessment of Coralline Species Diversity in the European Coasts Supported by Sequencing of Type Material: The Case Study of Lithophyllum nitorum (Corallinales, Rhodophyta) Pena, Viviana Hernandez-Kantun, Jazmin, J Adey, Walter, H Gall, Line Le Institut de Systématique, Evolution, Biodiversité (ISYEB ) Muséum national d'Histoire naturelle (MNHN)-Université Pierre et Marie Curie - Paris 6 (UPMC)-École Pratique des Hautes Études (EPHE) Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Centre National de la Recherche Scientifique (CNRS) 2018-02 https://hal.sorbonne-universite.fr/hal-01787113 https://hal.sorbonne-universite.fr/hal-01787113/document https://hal.sorbonne-universite.fr/hal-01787113/file/FREIRE%20PENA_Viviana.pdf https://doi.org/10.7872/crya/v39.iss1.2018.123 en eng HAL CCSD BioOne info:eu-repo/semantics/altIdentifier/doi/10.7872/crya/v39.iss1.2018.123 hal-01787113 https://hal.sorbonne-universite.fr/hal-01787113 https://hal.sorbonne-universite.fr/hal-01787113/document https://hal.sorbonne-universite.fr/hal-01787113/file/FREIRE%20PENA_Viviana.pdf doi:10.7872/crya/v39.iss1.2018.123 info:eu-repo/semantics/OpenAccess ISSN: 0181-1568 Cryptogamie Algologie https://hal.sorbonne-universite.fr/hal-01787113 Cryptogamie Algologie, 2018, 39 (1), pp.123 - 137. ⟨10.7872/crya/v39.iss1.2018.123⟩ [SDE.BE]Environmental Sciences/Biodiversity and Ecology info:eu-repo/semantics/article Journal articles 2018 ftecolephe https://doi.org/10.7872/crya/v39.iss1.2018.123 2024-04-25T01:53:17Z International audience A constant effort in sequencing an extensive number of specimens originating from comprehensive sampling had return an unprecedented amount of information fostering our understanding of diversity, evolution and distribution of coralline algae; however, many sequences lack reliable assignation of a taxonomic name, specially at the species level. Recently, the sequencing of type material allowed to bridge this gap by providing a direct link between the DNA sequence and the type bearing name. For instance, in the genus Lithophyllum, the identity of three species, generally abundant along the European Atlantic and the Mediterranean, was demonstrated by including sequences of the type material. Nevertheless, for less conspicious species, such as Lithophyllum nitorum, data are still needed to assess distribution, anatomy, phylogenetic affinities and taxonomic status. Using DNA sequences recovered from the type material of L. nitorum, further recent collections were resolved as conspecific and used to improve the description and refine the distribution of this species. Lithophyllum nitorum consisted of subtidal, thin crusts overgrowing fragments of dead maerl, pebbles and drifted fragments of fishing lines. The presence of uniporate conceptacles markedly protruding can be considered an external morphological feature useful to identify L. nitorum from other subtidal Lithophyllum species with similar habitat. Lithophyllum nitorum is reported for the Mediterranean Sea and confirmed in the North East Atlantic, a similar distribution as for L. incrustans and L. hibernicum. Article in Journal/Newspaper North East Atlantic EPHE (Ecole pratique des hautes études, Paris): HAL Cryptogamie, Algologie 39 1 123 137
institution Open Polar
collection EPHE (Ecole pratique des hautes études, Paris): HAL
op_collection_id ftecolephe
language English
topic [SDE.BE]Environmental Sciences/Biodiversity and Ecology
spellingShingle [SDE.BE]Environmental Sciences/Biodiversity and Ecology
Pena, Viviana
Hernandez-Kantun, Jazmin, J
Adey, Walter, H
Gall, Line Le
Assessment of Coralline Species Diversity in the European Coasts Supported by Sequencing of Type Material: The Case Study of Lithophyllum nitorum (Corallinales, Rhodophyta)
topic_facet [SDE.BE]Environmental Sciences/Biodiversity and Ecology
description International audience A constant effort in sequencing an extensive number of specimens originating from comprehensive sampling had return an unprecedented amount of information fostering our understanding of diversity, evolution and distribution of coralline algae; however, many sequences lack reliable assignation of a taxonomic name, specially at the species level. Recently, the sequencing of type material allowed to bridge this gap by providing a direct link between the DNA sequence and the type bearing name. For instance, in the genus Lithophyllum, the identity of three species, generally abundant along the European Atlantic and the Mediterranean, was demonstrated by including sequences of the type material. Nevertheless, for less conspicious species, such as Lithophyllum nitorum, data are still needed to assess distribution, anatomy, phylogenetic affinities and taxonomic status. Using DNA sequences recovered from the type material of L. nitorum, further recent collections were resolved as conspecific and used to improve the description and refine the distribution of this species. Lithophyllum nitorum consisted of subtidal, thin crusts overgrowing fragments of dead maerl, pebbles and drifted fragments of fishing lines. The presence of uniporate conceptacles markedly protruding can be considered an external morphological feature useful to identify L. nitorum from other subtidal Lithophyllum species with similar habitat. Lithophyllum nitorum is reported for the Mediterranean Sea and confirmed in the North East Atlantic, a similar distribution as for L. incrustans and L. hibernicum.
author2 Institut de Systématique, Evolution, Biodiversité (ISYEB )
Muséum national d'Histoire naturelle (MNHN)-Université Pierre et Marie Curie - Paris 6 (UPMC)-École Pratique des Hautes Études (EPHE)
Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Centre National de la Recherche Scientifique (CNRS)
format Article in Journal/Newspaper
author Pena, Viviana
Hernandez-Kantun, Jazmin, J
Adey, Walter, H
Gall, Line Le
author_facet Pena, Viviana
Hernandez-Kantun, Jazmin, J
Adey, Walter, H
Gall, Line Le
author_sort Pena, Viviana
title Assessment of Coralline Species Diversity in the European Coasts Supported by Sequencing of Type Material: The Case Study of Lithophyllum nitorum (Corallinales, Rhodophyta)
title_short Assessment of Coralline Species Diversity in the European Coasts Supported by Sequencing of Type Material: The Case Study of Lithophyllum nitorum (Corallinales, Rhodophyta)
title_full Assessment of Coralline Species Diversity in the European Coasts Supported by Sequencing of Type Material: The Case Study of Lithophyllum nitorum (Corallinales, Rhodophyta)
title_fullStr Assessment of Coralline Species Diversity in the European Coasts Supported by Sequencing of Type Material: The Case Study of Lithophyllum nitorum (Corallinales, Rhodophyta)
title_full_unstemmed Assessment of Coralline Species Diversity in the European Coasts Supported by Sequencing of Type Material: The Case Study of Lithophyllum nitorum (Corallinales, Rhodophyta)
title_sort assessment of coralline species diversity in the european coasts supported by sequencing of type material: the case study of lithophyllum nitorum (corallinales, rhodophyta)
publisher HAL CCSD
publishDate 2018
url https://hal.sorbonne-universite.fr/hal-01787113
https://hal.sorbonne-universite.fr/hal-01787113/document
https://hal.sorbonne-universite.fr/hal-01787113/file/FREIRE%20PENA_Viviana.pdf
https://doi.org/10.7872/crya/v39.iss1.2018.123
genre North East Atlantic
genre_facet North East Atlantic
op_source ISSN: 0181-1568
Cryptogamie Algologie
https://hal.sorbonne-universite.fr/hal-01787113
Cryptogamie Algologie, 2018, 39 (1), pp.123 - 137. ⟨10.7872/crya/v39.iss1.2018.123⟩
op_relation info:eu-repo/semantics/altIdentifier/doi/10.7872/crya/v39.iss1.2018.123
hal-01787113
https://hal.sorbonne-universite.fr/hal-01787113
https://hal.sorbonne-universite.fr/hal-01787113/document
https://hal.sorbonne-universite.fr/hal-01787113/file/FREIRE%20PENA_Viviana.pdf
doi:10.7872/crya/v39.iss1.2018.123
op_rights info:eu-repo/semantics/OpenAccess
op_doi https://doi.org/10.7872/crya/v39.iss1.2018.123
container_title Cryptogamie, Algologie
container_volume 39
container_issue 1
container_start_page 123
op_container_end_page 137
_version_ 1799485714498322432