Snow Microorganisms Colonise Arctic Soils Following Snow Melt

International audience Arctic soils are constantly subjected to microbial invasion from either airborne, marine, or animal sources, which may impact local microbial communities and ecosystem functioning. However, in winter, Arctic soils are isolated from outside sources other than snow, which is the...

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Published in:Microbial Ecology
Main Authors: Malard, Lucie, A, Bergk-Pinto, Benoit, Layton, Rose, Vogel, Timothy, M, Larose, Catherine, Pearce, David, A
Other Authors: Northumbria University Newcastle, Université de Lausanne = University of Lausanne (UNIL), Ampère, Département Bioingénierie (BioIng), Ampère (AMPERE), École Centrale de Lyon (ECL), Université de Lyon-Université de Lyon-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Institut National des Sciences Appliquées de Lyon (INSA Lyon), Université de Lyon-Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-École Centrale de Lyon (ECL), Université de Lyon-Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Sciensano Bruxelles, Réseau International des Instituts Pasteur (RIIP)
Format: Article in Journal/Newspaper
Language:English
Published: HAL CCSD 2023
Subjects:
Online Access:https://hal.science/hal-04291429
https://hal.science/hal-04291429/document
https://hal.science/hal-04291429/file/s00248-023-02204-y.pdf
https://doi.org/10.1007/s00248-023-02204-y
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spelling ftecolecentrlyon:oai:HAL:hal-04291429v1 2024-06-02T08:00:21+00:00 Snow Microorganisms Colonise Arctic Soils Following Snow Melt Malard, Lucie, A Bergk-Pinto, Benoit Layton, Rose Vogel, Timothy, M Larose, Catherine Pearce, David, A Northumbria University Newcastle Université de Lausanne = University of Lausanne (UNIL) Ampère, Département Bioingénierie (BioIng) Ampère (AMPERE) École Centrale de Lyon (ECL) Université de Lyon-Université de Lyon-Université Claude Bernard Lyon 1 (UCBL) Université de Lyon-Institut National des Sciences Appliquées de Lyon (INSA Lyon) Université de Lyon-Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-École Centrale de Lyon (ECL) Université de Lyon-Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) Sciensano Bruxelles Réseau International des Instituts Pasteur (RIIP) 2023-03-20 https://hal.science/hal-04291429 https://hal.science/hal-04291429/document https://hal.science/hal-04291429/file/s00248-023-02204-y.pdf https://doi.org/10.1007/s00248-023-02204-y en eng HAL CCSD Springer Verlag info:eu-repo/semantics/altIdentifier/doi/10.1007/s00248-023-02204-y hal-04291429 https://hal.science/hal-04291429 https://hal.science/hal-04291429/document https://hal.science/hal-04291429/file/s00248-023-02204-y.pdf doi:10.1007/s00248-023-02204-y info:eu-repo/semantics/OpenAccess ISSN: 0095-3628 EISSN: 1432-184X Microbial ecology https://hal.science/hal-04291429 Microbial ecology, 2023, 86 (3), pp.1661-1675. ⟨10.1007/s00248-023-02204-y⟩ Microbial colonisation Airborne dispersal Coalescence Snow Soils Arctic ecosystems Bacterial diversity Microbial colonisation Airborne dispersal Coalescence Snow Soils Arctic ecosystems Bacterial diversity [SDV]Life Sciences [q-bio] info:eu-repo/semantics/article Journal articles 2023 ftecolecentrlyon https://doi.org/10.1007/s00248-023-02204-y 2024-05-07T02:59:53Z International audience Arctic soils are constantly subjected to microbial invasion from either airborne, marine, or animal sources, which may impact local microbial communities and ecosystem functioning. However, in winter, Arctic soils are isolated from outside sources other than snow, which is the sole source of microorganisms. Successful colonisation of soil by snow microorganisms depends on the ability to survive and compete of both, the invading and resident community. Using shallow shotgun metagenome sequencing and amplicon sequencing, this study monitored snow and soil microbial communities throughout snow melt to investigate the colonisation process of Arctic soils. Microbial colonisation likely occurred as all the characteristics of successful colonisation were observed. The colonising microorganisms originating from the snow were already adapted to the local environmental conditions and were subsequently subjected to many similar conditions in the Arctic soil. Furthermore, competition-related genes (e.g. motility and virulence) increased in snow samples as the snow melted. Overall, one hundred potentially successful colonisers were identified in the soil and, thus, demonstrated the deposition and growth of snow microorganisms in soils during melt. Article in Journal/Newspaper Arctic Portail HAL - Ecole Centrale de Lyon Arctic Microbial Ecology 86 3 1661 1675
institution Open Polar
collection Portail HAL - Ecole Centrale de Lyon
op_collection_id ftecolecentrlyon
language English
topic Microbial colonisation Airborne dispersal Coalescence Snow Soils Arctic ecosystems Bacterial diversity
Microbial colonisation
Airborne dispersal
Coalescence
Snow
Soils
Arctic ecosystems
Bacterial diversity
[SDV]Life Sciences [q-bio]
spellingShingle Microbial colonisation Airborne dispersal Coalescence Snow Soils Arctic ecosystems Bacterial diversity
Microbial colonisation
Airborne dispersal
Coalescence
Snow
Soils
Arctic ecosystems
Bacterial diversity
[SDV]Life Sciences [q-bio]
Malard, Lucie, A
Bergk-Pinto, Benoit
Layton, Rose
Vogel, Timothy, M
Larose, Catherine
Pearce, David, A
Snow Microorganisms Colonise Arctic Soils Following Snow Melt
topic_facet Microbial colonisation Airborne dispersal Coalescence Snow Soils Arctic ecosystems Bacterial diversity
Microbial colonisation
Airborne dispersal
Coalescence
Snow
Soils
Arctic ecosystems
Bacterial diversity
[SDV]Life Sciences [q-bio]
description International audience Arctic soils are constantly subjected to microbial invasion from either airborne, marine, or animal sources, which may impact local microbial communities and ecosystem functioning. However, in winter, Arctic soils are isolated from outside sources other than snow, which is the sole source of microorganisms. Successful colonisation of soil by snow microorganisms depends on the ability to survive and compete of both, the invading and resident community. Using shallow shotgun metagenome sequencing and amplicon sequencing, this study monitored snow and soil microbial communities throughout snow melt to investigate the colonisation process of Arctic soils. Microbial colonisation likely occurred as all the characteristics of successful colonisation were observed. The colonising microorganisms originating from the snow were already adapted to the local environmental conditions and were subsequently subjected to many similar conditions in the Arctic soil. Furthermore, competition-related genes (e.g. motility and virulence) increased in snow samples as the snow melted. Overall, one hundred potentially successful colonisers were identified in the soil and, thus, demonstrated the deposition and growth of snow microorganisms in soils during melt.
author2 Northumbria University Newcastle
Université de Lausanne = University of Lausanne (UNIL)
Ampère, Département Bioingénierie (BioIng)
Ampère (AMPERE)
École Centrale de Lyon (ECL)
Université de Lyon-Université de Lyon-Université Claude Bernard Lyon 1 (UCBL)
Université de Lyon-Institut National des Sciences Appliquées de Lyon (INSA Lyon)
Université de Lyon-Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-École Centrale de Lyon (ECL)
Université de Lyon-Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)
Sciensano Bruxelles
Réseau International des Instituts Pasteur (RIIP)
format Article in Journal/Newspaper
author Malard, Lucie, A
Bergk-Pinto, Benoit
Layton, Rose
Vogel, Timothy, M
Larose, Catherine
Pearce, David, A
author_facet Malard, Lucie, A
Bergk-Pinto, Benoit
Layton, Rose
Vogel, Timothy, M
Larose, Catherine
Pearce, David, A
author_sort Malard, Lucie, A
title Snow Microorganisms Colonise Arctic Soils Following Snow Melt
title_short Snow Microorganisms Colonise Arctic Soils Following Snow Melt
title_full Snow Microorganisms Colonise Arctic Soils Following Snow Melt
title_fullStr Snow Microorganisms Colonise Arctic Soils Following Snow Melt
title_full_unstemmed Snow Microorganisms Colonise Arctic Soils Following Snow Melt
title_sort snow microorganisms colonise arctic soils following snow melt
publisher HAL CCSD
publishDate 2023
url https://hal.science/hal-04291429
https://hal.science/hal-04291429/document
https://hal.science/hal-04291429/file/s00248-023-02204-y.pdf
https://doi.org/10.1007/s00248-023-02204-y
geographic Arctic
geographic_facet Arctic
genre Arctic
genre_facet Arctic
op_source ISSN: 0095-3628
EISSN: 1432-184X
Microbial ecology
https://hal.science/hal-04291429
Microbial ecology, 2023, 86 (3), pp.1661-1675. ⟨10.1007/s00248-023-02204-y⟩
op_relation info:eu-repo/semantics/altIdentifier/doi/10.1007/s00248-023-02204-y
hal-04291429
https://hal.science/hal-04291429
https://hal.science/hal-04291429/document
https://hal.science/hal-04291429/file/s00248-023-02204-y.pdf
doi:10.1007/s00248-023-02204-y
op_rights info:eu-repo/semantics/OpenAccess
op_doi https://doi.org/10.1007/s00248-023-02204-y
container_title Microbial Ecology
container_volume 86
container_issue 3
container_start_page 1661
op_container_end_page 1675
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