Data from: The utility of CAD in recovering Gondwanan vicariance events and the evolutionary history of Aciliini (Coleoptera: Dytiscidae)
Background: Aciliini presently includes 69 species of medium-sized water beetles distributed on all continents except Antarctica. The pattern of distribution with several genera confined to different continents of the Southern Hemisphere raises the yet untested hypothesis of a Gondwana vicariance or...
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ftdryad:oai:v1.datadryad.org:10255/dryad.57803 2023-05-15T13:58:09+02:00 Data from: The utility of CAD in recovering Gondwanan vicariance events and the evolutionary history of Aciliini (Coleoptera: Dytiscidae) Bukontaite, Rasa Miller, Kelly B. Bergsten, Johannes Cenozoic Mesozoic 2014-01-27T19:09:27Z http://hdl.handle.net/10255/dryad.57803 https://doi.org/10.5061/dryad.052ng unknown doi:10.5061/dryad.052ng/1 doi:10.5061/dryad.052ng/2 doi:10.5061/dryad.052ng/3 doi:10.5061/dryad.052ng/4 doi:10.1186/1471-2148-14-5 PMID:24423391 doi:10.5061/dryad.052ng Bukontaite R, Miller KB, Bergsten J (2014) The utility of CAD in recovering Gondwanan vicariance events and the evolutionary history of Aciliini (Coleoptera: Dytiscidae). BMC Evolutionary Biology 14: 5. http://hdl.handle.net/10255/dryad.57803 CAD Phylogenetic Informativeness Adephaga Biogeography Phylogeny Aciliini Article 2014 ftdryad https://doi.org/10.5061/dryad.052ng https://doi.org/10.5061/dryad.052ng/1 https://doi.org/10.5061/dryad.052ng/2 https://doi.org/10.5061/dryad.052ng/3 https://doi.org/10.5061/dryad.052ng/4 https://doi.org/10.1186/1471-2148-14-5 2020-01-01T15:05:35Z Background: Aciliini presently includes 69 species of medium-sized water beetles distributed on all continents except Antarctica. The pattern of distribution with several genera confined to different continents of the Southern Hemisphere raises the yet untested hypothesis of a Gondwana vicariance origin. The monophyly of Aciliini has been questioned with regard to Eretini, and there are competing hypotheses about the intergeneric relationship in the tribe. This study is the first comprehensive phylogenetic analysis focused on the tribe Aciliini and it is based on eight gene fragments. The aims of the present study are: 1) to test the monophyly of Aciliini and clarify the position of the tribe Eretini and to resolve the relationship among genera within Aciliini, 2) to calibrate the divergence times within Aciliini and test different biogeographical scenarios, especially if a Gondwana vicariance origin is plausible, and3) to evaluate the utility of the gene CAD (rudimentary) for phylogenetic analysis in Dytiscidae. Results: Our analyses confirm Aciliini as monophyletic and Eretini as the sister group, with high support. All six genera with multiple species are also supported as monophyletic. The origin of the tribe is firmly based on the Southern Hemisphere with the arrangement of Neotropical and Afrotropical taxa as the most basal clades suggesting a Gondwana vicariance origin. However, the uncertainty as to whether a fossil can be used as a stem- or crowngroup calibration point for Acilius influenced the result: as crowngroup calibration, the 95% HPD interval for the basal nodes included the geological age estimate for the Gondwana break-up, but as a stem group calibration the basal nodes were too young. Our study suggests CAD to be the most informative marker between 15 and 50 Ma. Notably, the 2000 bp CAD fragment analyzed alone fully resolved the tree with high support on all basal branches as well as for all genera as monophyletic. Conclusions: 1) Molecular data confirmed Aciliini as a monophyletic group. 2) Bayesian optimizations of the biogeographical history are consistent with an influence of Gondwana break-up history, but were dependent on the calibration method. 3) The evaluation using a method of phylogenetic signal, suggested Wnt and CAD as the most informative of our sampled genes per base pair. Article in Journal/Newspaper Antarc* Antarctica Dryad Digital Repository (Duke University) |
institution |
Open Polar |
collection |
Dryad Digital Repository (Duke University) |
op_collection_id |
ftdryad |
language |
unknown |
topic |
CAD Phylogenetic Informativeness Adephaga Biogeography Phylogeny Aciliini |
spellingShingle |
CAD Phylogenetic Informativeness Adephaga Biogeography Phylogeny Aciliini Bukontaite, Rasa Miller, Kelly B. Bergsten, Johannes Data from: The utility of CAD in recovering Gondwanan vicariance events and the evolutionary history of Aciliini (Coleoptera: Dytiscidae) |
topic_facet |
CAD Phylogenetic Informativeness Adephaga Biogeography Phylogeny Aciliini |
description |
Background: Aciliini presently includes 69 species of medium-sized water beetles distributed on all continents except Antarctica. The pattern of distribution with several genera confined to different continents of the Southern Hemisphere raises the yet untested hypothesis of a Gondwana vicariance origin. The monophyly of Aciliini has been questioned with regard to Eretini, and there are competing hypotheses about the intergeneric relationship in the tribe. This study is the first comprehensive phylogenetic analysis focused on the tribe Aciliini and it is based on eight gene fragments. The aims of the present study are: 1) to test the monophyly of Aciliini and clarify the position of the tribe Eretini and to resolve the relationship among genera within Aciliini, 2) to calibrate the divergence times within Aciliini and test different biogeographical scenarios, especially if a Gondwana vicariance origin is plausible, and3) to evaluate the utility of the gene CAD (rudimentary) for phylogenetic analysis in Dytiscidae. Results: Our analyses confirm Aciliini as monophyletic and Eretini as the sister group, with high support. All six genera with multiple species are also supported as monophyletic. The origin of the tribe is firmly based on the Southern Hemisphere with the arrangement of Neotropical and Afrotropical taxa as the most basal clades suggesting a Gondwana vicariance origin. However, the uncertainty as to whether a fossil can be used as a stem- or crowngroup calibration point for Acilius influenced the result: as crowngroup calibration, the 95% HPD interval for the basal nodes included the geological age estimate for the Gondwana break-up, but as a stem group calibration the basal nodes were too young. Our study suggests CAD to be the most informative marker between 15 and 50 Ma. Notably, the 2000 bp CAD fragment analyzed alone fully resolved the tree with high support on all basal branches as well as for all genera as monophyletic. Conclusions: 1) Molecular data confirmed Aciliini as a monophyletic group. 2) Bayesian optimizations of the biogeographical history are consistent with an influence of Gondwana break-up history, but were dependent on the calibration method. 3) The evaluation using a method of phylogenetic signal, suggested Wnt and CAD as the most informative of our sampled genes per base pair. |
format |
Article in Journal/Newspaper |
author |
Bukontaite, Rasa Miller, Kelly B. Bergsten, Johannes |
author_facet |
Bukontaite, Rasa Miller, Kelly B. Bergsten, Johannes |
author_sort |
Bukontaite, Rasa |
title |
Data from: The utility of CAD in recovering Gondwanan vicariance events and the evolutionary history of Aciliini (Coleoptera: Dytiscidae) |
title_short |
Data from: The utility of CAD in recovering Gondwanan vicariance events and the evolutionary history of Aciliini (Coleoptera: Dytiscidae) |
title_full |
Data from: The utility of CAD in recovering Gondwanan vicariance events and the evolutionary history of Aciliini (Coleoptera: Dytiscidae) |
title_fullStr |
Data from: The utility of CAD in recovering Gondwanan vicariance events and the evolutionary history of Aciliini (Coleoptera: Dytiscidae) |
title_full_unstemmed |
Data from: The utility of CAD in recovering Gondwanan vicariance events and the evolutionary history of Aciliini (Coleoptera: Dytiscidae) |
title_sort |
data from: the utility of cad in recovering gondwanan vicariance events and the evolutionary history of aciliini (coleoptera: dytiscidae) |
publishDate |
2014 |
url |
http://hdl.handle.net/10255/dryad.57803 https://doi.org/10.5061/dryad.052ng |
op_coverage |
Cenozoic Mesozoic |
genre |
Antarc* Antarctica |
genre_facet |
Antarc* Antarctica |
op_relation |
doi:10.5061/dryad.052ng/1 doi:10.5061/dryad.052ng/2 doi:10.5061/dryad.052ng/3 doi:10.5061/dryad.052ng/4 doi:10.1186/1471-2148-14-5 PMID:24423391 doi:10.5061/dryad.052ng Bukontaite R, Miller KB, Bergsten J (2014) The utility of CAD in recovering Gondwanan vicariance events and the evolutionary history of Aciliini (Coleoptera: Dytiscidae). BMC Evolutionary Biology 14: 5. http://hdl.handle.net/10255/dryad.57803 |
op_doi |
https://doi.org/10.5061/dryad.052ng https://doi.org/10.5061/dryad.052ng/1 https://doi.org/10.5061/dryad.052ng/2 https://doi.org/10.5061/dryad.052ng/3 https://doi.org/10.5061/dryad.052ng/4 https://doi.org/10.1186/1471-2148-14-5 |
_version_ |
1766266252612861952 |