Data from: Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea)
BACKGROUND: The shrimp Nematocarcinus lanceopes Bate, 1888 is found in the deep sea around Antarctica and sub-Antarctic islands. Previous studies on mitochondrial data and species distribution models provided evidence for a homogenous circum-Antarctic population of N. lanceopes. However, to analyze...
Main Authors: | , , , , |
---|---|
Format: | Article in Journal/Newspaper |
Language: | unknown |
Published: |
2013
|
Subjects: | |
Online Access: | http://hdl.handle.net/10255/dryad.46414 https://doi.org/10.5061/dryad.gg3rn |
id |
ftdryad:oai:v1.datadryad.org:10255/dryad.46414 |
---|---|
record_format |
openpolar |
spelling |
ftdryad:oai:v1.datadryad.org:10255/dryad.46414 2023-05-15T13:38:10+02:00 Data from: Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea) Dambach, Johannes Raupach, Michael J. Mayer, Christoph Schwarzer, Julia Leese, Florian Antarctica 2013-03-05T16:15:41Z http://hdl.handle.net/10255/dryad.46414 https://doi.org/10.5061/dryad.gg3rn unknown doi:10.5061/dryad.gg3rn/1 doi:10.1186/1756-0500-6-75 PMID:23448502 doi:10.5061/dryad.gg3rn Dambach J, Raupach MJ, Mayer C, Schwarzer J, Leese F (2013) Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea). BMC Research Notes 6: 75. http://hdl.handle.net/10255/dryad.46414 Antarctic deep sea microsatellites Southern Ocean Article 2013 ftdryad https://doi.org/10.5061/dryad.gg3rn https://doi.org/10.5061/dryad.gg3rn/1 https://doi.org/10.1186/1756-0500-6-75 2020-01-01T14:59:53Z BACKGROUND: The shrimp Nematocarcinus lanceopes Bate, 1888 is found in the deep sea around Antarctica and sub-Antarctic islands. Previous studies on mitochondrial data and species distribution models provided evidence for a homogenous circum-Antarctic population of N. lanceopes. However, to analyze the fine-scale population genetic structure and to examine influences of abiotic environmental conditions on population composition and genetic diversity, a set of fast evolving nuclear microsatellite markers is required. FINDINGS: We report the isolation and characterization of nine polymorphic microsatellite markers from the Antarctic deep-sea shrimp species Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea). Microsatellite markers were screened in 55 individuals from different locations around the Antarctic continent. All markers were polymorphic with 9 to 25 alleles per locus. The observed heterozygosity ranged from 0.545 to 0.927 and the expected heterozygosity from 0.549 to 0.934. CONCLUSIONS: The reported markers provide a novel tool to study genetic structure and diversity in Nematocarcinus lanceopes populations in the Southern Ocean and monitor effects of ongoing climate change in the region on the populations inhabiting these. Article in Journal/Newspaper Antarc* Antarctic Antarctica Southern Ocean Dryad Digital Repository (Duke University) Antarctic Southern Ocean The Antarctic |
institution |
Open Polar |
collection |
Dryad Digital Repository (Duke University) |
op_collection_id |
ftdryad |
language |
unknown |
topic |
Antarctic deep sea microsatellites Southern Ocean |
spellingShingle |
Antarctic deep sea microsatellites Southern Ocean Dambach, Johannes Raupach, Michael J. Mayer, Christoph Schwarzer, Julia Leese, Florian Data from: Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea) |
topic_facet |
Antarctic deep sea microsatellites Southern Ocean |
description |
BACKGROUND: The shrimp Nematocarcinus lanceopes Bate, 1888 is found in the deep sea around Antarctica and sub-Antarctic islands. Previous studies on mitochondrial data and species distribution models provided evidence for a homogenous circum-Antarctic population of N. lanceopes. However, to analyze the fine-scale population genetic structure and to examine influences of abiotic environmental conditions on population composition and genetic diversity, a set of fast evolving nuclear microsatellite markers is required. FINDINGS: We report the isolation and characterization of nine polymorphic microsatellite markers from the Antarctic deep-sea shrimp species Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea). Microsatellite markers were screened in 55 individuals from different locations around the Antarctic continent. All markers were polymorphic with 9 to 25 alleles per locus. The observed heterozygosity ranged from 0.545 to 0.927 and the expected heterozygosity from 0.549 to 0.934. CONCLUSIONS: The reported markers provide a novel tool to study genetic structure and diversity in Nematocarcinus lanceopes populations in the Southern Ocean and monitor effects of ongoing climate change in the region on the populations inhabiting these. |
format |
Article in Journal/Newspaper |
author |
Dambach, Johannes Raupach, Michael J. Mayer, Christoph Schwarzer, Julia Leese, Florian |
author_facet |
Dambach, Johannes Raupach, Michael J. Mayer, Christoph Schwarzer, Julia Leese, Florian |
author_sort |
Dambach, Johannes |
title |
Data from: Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea) |
title_short |
Data from: Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea) |
title_full |
Data from: Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea) |
title_fullStr |
Data from: Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea) |
title_full_unstemmed |
Data from: Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea) |
title_sort |
data from: isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp nematocarcinus lanceopes (crustacea: decapoda: caridea) |
publishDate |
2013 |
url |
http://hdl.handle.net/10255/dryad.46414 https://doi.org/10.5061/dryad.gg3rn |
op_coverage |
Antarctica |
geographic |
Antarctic Southern Ocean The Antarctic |
geographic_facet |
Antarctic Southern Ocean The Antarctic |
genre |
Antarc* Antarctic Antarctica Southern Ocean |
genre_facet |
Antarc* Antarctic Antarctica Southern Ocean |
op_relation |
doi:10.5061/dryad.gg3rn/1 doi:10.1186/1756-0500-6-75 PMID:23448502 doi:10.5061/dryad.gg3rn Dambach J, Raupach MJ, Mayer C, Schwarzer J, Leese F (2013) Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea). BMC Research Notes 6: 75. http://hdl.handle.net/10255/dryad.46414 |
op_doi |
https://doi.org/10.5061/dryad.gg3rn https://doi.org/10.5061/dryad.gg3rn/1 https://doi.org/10.1186/1756-0500-6-75 |
_version_ |
1766102165714108416 |