Data from: Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea)

BACKGROUND: The shrimp Nematocarcinus lanceopes Bate, 1888 is found in the deep sea around Antarctica and sub-Antarctic islands. Previous studies on mitochondrial data and species distribution models provided evidence for a homogenous circum-Antarctic population of N. lanceopes. However, to analyze...

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Main Authors: Dambach, Johannes, Raupach, Michael J., Mayer, Christoph, Schwarzer, Julia, Leese, Florian
Format: Article in Journal/Newspaper
Language:unknown
Published: 2013
Subjects:
Online Access:http://hdl.handle.net/10255/dryad.46414
https://doi.org/10.5061/dryad.gg3rn
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spelling ftdryad:oai:v1.datadryad.org:10255/dryad.46414 2023-05-15T13:38:10+02:00 Data from: Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea) Dambach, Johannes Raupach, Michael J. Mayer, Christoph Schwarzer, Julia Leese, Florian Antarctica 2013-03-05T16:15:41Z http://hdl.handle.net/10255/dryad.46414 https://doi.org/10.5061/dryad.gg3rn unknown doi:10.5061/dryad.gg3rn/1 doi:10.1186/1756-0500-6-75 PMID:23448502 doi:10.5061/dryad.gg3rn Dambach J, Raupach MJ, Mayer C, Schwarzer J, Leese F (2013) Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea). BMC Research Notes 6: 75. http://hdl.handle.net/10255/dryad.46414 Antarctic deep sea microsatellites Southern Ocean Article 2013 ftdryad https://doi.org/10.5061/dryad.gg3rn https://doi.org/10.5061/dryad.gg3rn/1 https://doi.org/10.1186/1756-0500-6-75 2020-01-01T14:59:53Z BACKGROUND: The shrimp Nematocarcinus lanceopes Bate, 1888 is found in the deep sea around Antarctica and sub-Antarctic islands. Previous studies on mitochondrial data and species distribution models provided evidence for a homogenous circum-Antarctic population of N. lanceopes. However, to analyze the fine-scale population genetic structure and to examine influences of abiotic environmental conditions on population composition and genetic diversity, a set of fast evolving nuclear microsatellite markers is required. FINDINGS: We report the isolation and characterization of nine polymorphic microsatellite markers from the Antarctic deep-sea shrimp species Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea). Microsatellite markers were screened in 55 individuals from different locations around the Antarctic continent. All markers were polymorphic with 9 to 25 alleles per locus. The observed heterozygosity ranged from 0.545 to 0.927 and the expected heterozygosity from 0.549 to 0.934. CONCLUSIONS: The reported markers provide a novel tool to study genetic structure and diversity in Nematocarcinus lanceopes populations in the Southern Ocean and monitor effects of ongoing climate change in the region on the populations inhabiting these. Article in Journal/Newspaper Antarc* Antarctic Antarctica Southern Ocean Dryad Digital Repository (Duke University) Antarctic Southern Ocean The Antarctic
institution Open Polar
collection Dryad Digital Repository (Duke University)
op_collection_id ftdryad
language unknown
topic Antarctic
deep sea
microsatellites
Southern Ocean
spellingShingle Antarctic
deep sea
microsatellites
Southern Ocean
Dambach, Johannes
Raupach, Michael J.
Mayer, Christoph
Schwarzer, Julia
Leese, Florian
Data from: Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea)
topic_facet Antarctic
deep sea
microsatellites
Southern Ocean
description BACKGROUND: The shrimp Nematocarcinus lanceopes Bate, 1888 is found in the deep sea around Antarctica and sub-Antarctic islands. Previous studies on mitochondrial data and species distribution models provided evidence for a homogenous circum-Antarctic population of N. lanceopes. However, to analyze the fine-scale population genetic structure and to examine influences of abiotic environmental conditions on population composition and genetic diversity, a set of fast evolving nuclear microsatellite markers is required. FINDINGS: We report the isolation and characterization of nine polymorphic microsatellite markers from the Antarctic deep-sea shrimp species Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea). Microsatellite markers were screened in 55 individuals from different locations around the Antarctic continent. All markers were polymorphic with 9 to 25 alleles per locus. The observed heterozygosity ranged from 0.545 to 0.927 and the expected heterozygosity from 0.549 to 0.934. CONCLUSIONS: The reported markers provide a novel tool to study genetic structure and diversity in Nematocarcinus lanceopes populations in the Southern Ocean and monitor effects of ongoing climate change in the region on the populations inhabiting these.
format Article in Journal/Newspaper
author Dambach, Johannes
Raupach, Michael J.
Mayer, Christoph
Schwarzer, Julia
Leese, Florian
author_facet Dambach, Johannes
Raupach, Michael J.
Mayer, Christoph
Schwarzer, Julia
Leese, Florian
author_sort Dambach, Johannes
title Data from: Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea)
title_short Data from: Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea)
title_full Data from: Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea)
title_fullStr Data from: Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea)
title_full_unstemmed Data from: Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea)
title_sort data from: isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp nematocarcinus lanceopes (crustacea: decapoda: caridea)
publishDate 2013
url http://hdl.handle.net/10255/dryad.46414
https://doi.org/10.5061/dryad.gg3rn
op_coverage Antarctica
geographic Antarctic
Southern Ocean
The Antarctic
geographic_facet Antarctic
Southern Ocean
The Antarctic
genre Antarc*
Antarctic
Antarctica
Southern Ocean
genre_facet Antarc*
Antarctic
Antarctica
Southern Ocean
op_relation doi:10.5061/dryad.gg3rn/1
doi:10.1186/1756-0500-6-75
PMID:23448502
doi:10.5061/dryad.gg3rn
Dambach J, Raupach MJ, Mayer C, Schwarzer J, Leese F (2013) Isolation and characterization of nine polymorphic microsatellite markers for the deep-sea shrimp Nematocarcinus lanceopes (Crustacea: Decapoda: Caridea). BMC Research Notes 6: 75.
http://hdl.handle.net/10255/dryad.46414
op_doi https://doi.org/10.5061/dryad.gg3rn
https://doi.org/10.5061/dryad.gg3rn/1
https://doi.org/10.1186/1756-0500-6-75
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