Data from: Grains of connectivity: analysis at multiple spatial scales in landscape genetics

Landscape genetic analyses are typically conducted at one spatial scale. Considering multiple scales may be essential for identifying landscape features influencing gene flow. We examined landscape connectivity for woodland caribou (Rangifer tarandus caribou) at multiple spatial scales using a new a...

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Main Authors: Galpern, Paul, Manseau, Micheline, Wilson, Paul
Format: Article in Journal/Newspaper
Language:unknown
Published: 2012
Subjects:
Online Access:http://hdl.handle.net/10255/dryad.39692
https://doi.org/10.5061/dryad.r3j5d
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spelling ftdryad:oai:v1.datadryad.org:10255/dryad.39692 2023-05-15T18:04:23+02:00 Data from: Grains of connectivity: analysis at multiple spatial scales in landscape genetics Galpern, Paul Manseau, Micheline Wilson, Paul Saskatchewan Canada 2012-05-22T18:53:30Z http://hdl.handle.net/10255/dryad.39692 https://doi.org/10.5061/dryad.r3j5d unknown doi:10.5061/dryad.r3j5d/1 doi:10.5061/dryad.r3j5d/2 doi:10.1111/j.1365-294X.2012.05677.x PMID:22724394 doi:10.5061/dryad.r3j5d Galpern P, Manseau M, Wilson P (2012) Grains of connectivity: analysis at multiple spatial scales in landscape genetics. Molecular Ecology 21(16): 3996–4009. http://hdl.handle.net/10255/dryad.39692 Landscape resistance Gene flow Patch-based landscape graphs Voronoi tessellation Landscape change Article 2012 ftdryad https://doi.org/10.5061/dryad.r3j5d https://doi.org/10.5061/dryad.r3j5d/1 https://doi.org/10.5061/dryad.r3j5d/2 https://doi.org/10.1111/j.1365-294X.2012.05677.x 2020-01-01T14:56:33Z Landscape genetic analyses are typically conducted at one spatial scale. Considering multiple scales may be essential for identifying landscape features influencing gene flow. We examined landscape connectivity for woodland caribou (Rangifer tarandus caribou) at multiple spatial scales using a new approach based on landscape graphs that creates a Voronoi tessellation of the landscape. To illustrate the potential of the method, we generated five resistance surfaces to explain how landscape pattern may influence gene flow across the range of this population. We tested each resistance surface using a raster at the spatial grain of available landscape data (200 m grid squares). We then used our method to produce up to 127 additional grains for each resistance surface. We applied a causal modelling framework with partial Mantel tests, where evidence of landscape resistance is tested against an alternative hypothesis of isolation-by-distance, and found statistically significant support for landscape resistance to gene flow in 89 of the 507 spatial grains examined. We found evidence that major roads as well as the cumulative effects of natural and anthropogenic disturbance may be contributing to the genetic structure. Using only the original grid surface yielded no evidence for landscape resistance to gene flow. Our results show that using multiple spatial grains can reveal landscape influences on genetic structure that may be overlooked with a single grain, and suggest that coarsening the grain of landcover data may be appropriate for highly-mobile species. We discuss how grains of connectivity and related analyses have potential landscape genetic applications in a broad range of systems. Article in Journal/Newspaper Rangifer tarandus Dryad Digital Repository (Duke University) Canada
institution Open Polar
collection Dryad Digital Repository (Duke University)
op_collection_id ftdryad
language unknown
topic Landscape resistance
Gene flow
Patch-based landscape graphs
Voronoi tessellation
Landscape change
spellingShingle Landscape resistance
Gene flow
Patch-based landscape graphs
Voronoi tessellation
Landscape change
Galpern, Paul
Manseau, Micheline
Wilson, Paul
Data from: Grains of connectivity: analysis at multiple spatial scales in landscape genetics
topic_facet Landscape resistance
Gene flow
Patch-based landscape graphs
Voronoi tessellation
Landscape change
description Landscape genetic analyses are typically conducted at one spatial scale. Considering multiple scales may be essential for identifying landscape features influencing gene flow. We examined landscape connectivity for woodland caribou (Rangifer tarandus caribou) at multiple spatial scales using a new approach based on landscape graphs that creates a Voronoi tessellation of the landscape. To illustrate the potential of the method, we generated five resistance surfaces to explain how landscape pattern may influence gene flow across the range of this population. We tested each resistance surface using a raster at the spatial grain of available landscape data (200 m grid squares). We then used our method to produce up to 127 additional grains for each resistance surface. We applied a causal modelling framework with partial Mantel tests, where evidence of landscape resistance is tested against an alternative hypothesis of isolation-by-distance, and found statistically significant support for landscape resistance to gene flow in 89 of the 507 spatial grains examined. We found evidence that major roads as well as the cumulative effects of natural and anthropogenic disturbance may be contributing to the genetic structure. Using only the original grid surface yielded no evidence for landscape resistance to gene flow. Our results show that using multiple spatial grains can reveal landscape influences on genetic structure that may be overlooked with a single grain, and suggest that coarsening the grain of landcover data may be appropriate for highly-mobile species. We discuss how grains of connectivity and related analyses have potential landscape genetic applications in a broad range of systems.
format Article in Journal/Newspaper
author Galpern, Paul
Manseau, Micheline
Wilson, Paul
author_facet Galpern, Paul
Manseau, Micheline
Wilson, Paul
author_sort Galpern, Paul
title Data from: Grains of connectivity: analysis at multiple spatial scales in landscape genetics
title_short Data from: Grains of connectivity: analysis at multiple spatial scales in landscape genetics
title_full Data from: Grains of connectivity: analysis at multiple spatial scales in landscape genetics
title_fullStr Data from: Grains of connectivity: analysis at multiple spatial scales in landscape genetics
title_full_unstemmed Data from: Grains of connectivity: analysis at multiple spatial scales in landscape genetics
title_sort data from: grains of connectivity: analysis at multiple spatial scales in landscape genetics
publishDate 2012
url http://hdl.handle.net/10255/dryad.39692
https://doi.org/10.5061/dryad.r3j5d
op_coverage Saskatchewan
Canada
geographic Canada
geographic_facet Canada
genre Rangifer tarandus
genre_facet Rangifer tarandus
op_relation doi:10.5061/dryad.r3j5d/1
doi:10.5061/dryad.r3j5d/2
doi:10.1111/j.1365-294X.2012.05677.x
PMID:22724394
doi:10.5061/dryad.r3j5d
Galpern P, Manseau M, Wilson P (2012) Grains of connectivity: analysis at multiple spatial scales in landscape genetics. Molecular Ecology 21(16): 3996–4009.
http://hdl.handle.net/10255/dryad.39692
op_doi https://doi.org/10.5061/dryad.r3j5d
https://doi.org/10.5061/dryad.r3j5d/1
https://doi.org/10.5061/dryad.r3j5d/2
https://doi.org/10.1111/j.1365-294X.2012.05677.x
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