Data from: Sampling bias and the fossil record of planktonic foraminifera on land and in the deep sea

Large-scale trends in planktonic foraminiferal diversity have so far been based on utilization of synoptic biostratigraphic range charts. Although this approach ensures the taxonomic consistency and quality of the data being used, it takes no formal account of any sampling biases that might exist in...

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Main Authors: Lloyd, Graeme T., Pearson, Paul N., Young, Jeremy R., Smith, Andrew B.
Format: Article in Journal/Newspaper
Language:unknown
Published: 2012
Subjects:
Online Access:http://hdl.handle.net/10255/dryad.39311
https://doi.org/10.5061/dryad.8ts3p
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spelling ftdryad:oai:v1.datadryad.org:10255/dryad.39311 2023-05-15T18:00:42+02:00 Data from: Sampling bias and the fossil record of planktonic foraminifera on land and in the deep sea Lloyd, Graeme T. Pearson, Paul N. Young, Jeremy R. Smith, Andrew B. Mesozoic Cenozoic 2012-04-24T20:18:40Z http://hdl.handle.net/10255/dryad.39311 https://doi.org/10.5061/dryad.8ts3p unknown doi:10.5061/dryad.8ts3p/1 doi:10.5061/dryad.8ts3p/2 doi:10.5061/dryad.8ts3p/3 doi:10.5061/dryad.8ts3p/4 doi:10.1666/11041.1 doi:10.5061/dryad.8ts3p Lloyd GT, Pearson PN, Young JR, Smith AB (2012) Sampling bias and the fossil record of planktonic foraminifera on land and in the deep sea. Molecular Ecology 38(4): 569-584. http://hdl.handle.net/10255/dryad.39311 evolution diversity sampling bias rock record Article 2012 ftdryad https://doi.org/10.5061/dryad.8ts3p https://doi.org/10.5061/dryad.8ts3p/1 https://doi.org/10.5061/dryad.8ts3p/2 https://doi.org/10.5061/dryad.8ts3p/3 https://doi.org/10.5061/dryad.8ts3p/4 https://doi.org/10.1666/11041.1 2020-01-01T14:56:23Z Large-scale trends in planktonic foraminiferal diversity have so far been based on utilization of synoptic biostratigraphic range charts. Although this approach ensures the taxonomic consistency and quality of the data being used, it takes no formal account of any sampling biases that might exist in the fossil record. We demonstrate that the occurrence data of planktonic foraminifera, as recorded in the primary literature, are strongly biased by sampling. We do this by demonstrating that raw diversity curves derived from the land-based and deep-sea records are strikingly different, but that they each correlate with the intensity of sampling in their respective environments, and thus are ultimately controlled by the structure of the geological record in each setting. Because sampling of the Mesozoic record is best in our land record whereas sampling of the Cenozoic is best in our deep-sea record, we combine the two to generate the best-supported estimates of species and genus diversity over time from these data. We correct for sampling bias using shareholder quorum subsampling and a modeling approach. The data are then transformed to generate a range-through plot of species richness that is compared with two earlier estimates of the diversity history where comparable species-in-bin data can be recovered. No robust statistical correlation is found among the three estimates. Although differences in amplitude are to be expected, differences in the actual shape of the curve are surprising. We conclude that these differences stem from the nature of the data themselves, namely the taxonomic scheme adopted and the taxonomic coverage used. Article in Journal/Newspaper Planktonic foraminifera Dryad Digital Repository (Duke University)
institution Open Polar
collection Dryad Digital Repository (Duke University)
op_collection_id ftdryad
language unknown
topic evolution
diversity
sampling bias
rock record
spellingShingle evolution
diversity
sampling bias
rock record
Lloyd, Graeme T.
Pearson, Paul N.
Young, Jeremy R.
Smith, Andrew B.
Data from: Sampling bias and the fossil record of planktonic foraminifera on land and in the deep sea
topic_facet evolution
diversity
sampling bias
rock record
description Large-scale trends in planktonic foraminiferal diversity have so far been based on utilization of synoptic biostratigraphic range charts. Although this approach ensures the taxonomic consistency and quality of the data being used, it takes no formal account of any sampling biases that might exist in the fossil record. We demonstrate that the occurrence data of planktonic foraminifera, as recorded in the primary literature, are strongly biased by sampling. We do this by demonstrating that raw diversity curves derived from the land-based and deep-sea records are strikingly different, but that they each correlate with the intensity of sampling in their respective environments, and thus are ultimately controlled by the structure of the geological record in each setting. Because sampling of the Mesozoic record is best in our land record whereas sampling of the Cenozoic is best in our deep-sea record, we combine the two to generate the best-supported estimates of species and genus diversity over time from these data. We correct for sampling bias using shareholder quorum subsampling and a modeling approach. The data are then transformed to generate a range-through plot of species richness that is compared with two earlier estimates of the diversity history where comparable species-in-bin data can be recovered. No robust statistical correlation is found among the three estimates. Although differences in amplitude are to be expected, differences in the actual shape of the curve are surprising. We conclude that these differences stem from the nature of the data themselves, namely the taxonomic scheme adopted and the taxonomic coverage used.
format Article in Journal/Newspaper
author Lloyd, Graeme T.
Pearson, Paul N.
Young, Jeremy R.
Smith, Andrew B.
author_facet Lloyd, Graeme T.
Pearson, Paul N.
Young, Jeremy R.
Smith, Andrew B.
author_sort Lloyd, Graeme T.
title Data from: Sampling bias and the fossil record of planktonic foraminifera on land and in the deep sea
title_short Data from: Sampling bias and the fossil record of planktonic foraminifera on land and in the deep sea
title_full Data from: Sampling bias and the fossil record of planktonic foraminifera on land and in the deep sea
title_fullStr Data from: Sampling bias and the fossil record of planktonic foraminifera on land and in the deep sea
title_full_unstemmed Data from: Sampling bias and the fossil record of planktonic foraminifera on land and in the deep sea
title_sort data from: sampling bias and the fossil record of planktonic foraminifera on land and in the deep sea
publishDate 2012
url http://hdl.handle.net/10255/dryad.39311
https://doi.org/10.5061/dryad.8ts3p
op_coverage Mesozoic
Cenozoic
genre Planktonic foraminifera
genre_facet Planktonic foraminifera
op_relation doi:10.5061/dryad.8ts3p/1
doi:10.5061/dryad.8ts3p/2
doi:10.5061/dryad.8ts3p/3
doi:10.5061/dryad.8ts3p/4
doi:10.1666/11041.1
doi:10.5061/dryad.8ts3p
Lloyd GT, Pearson PN, Young JR, Smith AB (2012) Sampling bias and the fossil record of planktonic foraminifera on land and in the deep sea. Molecular Ecology 38(4): 569-584.
http://hdl.handle.net/10255/dryad.39311
op_doi https://doi.org/10.5061/dryad.8ts3p
https://doi.org/10.5061/dryad.8ts3p/1
https://doi.org/10.5061/dryad.8ts3p/2
https://doi.org/10.5061/dryad.8ts3p/3
https://doi.org/10.5061/dryad.8ts3p/4
https://doi.org/10.1666/11041.1
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