Data from: Exploring neutral and adaptive processes in expanding populations of gilthead sea bream, Sparus aurata L., in the North-East Atlantic

Recent studies in empirical population genetics have highlighted the importance of taking into account both neutral and adaptive genetic variation in characterizing microevolutionary dynamics. Here we explore the genetic population structure and the footprints of selection in four populations of the...

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Main Authors: Mariani, Stefano, Coscia, Ilaria, Vogiatzi, Emmanouella, Kotoulas, Georgios, Tsigenopoulos, Costas S.
Format: Article in Journal/Newspaper
Language:unknown
Published: 2011
Subjects:
Online Access:http://hdl.handle.net/10255/dryad.35675
https://doi.org/10.5061/dryad.n722g4d3
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spelling ftdryad:oai:v1.datadryad.org:10255/dryad.35675 2023-05-15T17:38:20+02:00 Data from: Exploring neutral and adaptive processes in expanding populations of gilthead sea bream, Sparus aurata L., in the North-East Atlantic Mariani, Stefano Coscia, Ilaria Vogiatzi, Emmanouella Kotoulas, Georgios Tsigenopoulos, Costas S. North-East Atlantic 2011-10-28T15:54:42Z http://hdl.handle.net/10255/dryad.35675 https://doi.org/10.5061/dryad.n722g4d3 unknown doi:10.5061/dryad.n722g4d3/1 doi:10.1038/hdy.2011.120 PMID:22126850 doi:10.5061/dryad.n722g4d3 Mariani S, Coscia I, Vogiatzi E, Kotoulas G, Tsigenopoulos CS (2012) Exploring neutral and adaptive processes in expanding populations of gilthead sea bream, Sparus aurata L., in the North-East Atlantic. Heredity 108: 537-546. http://hdl.handle.net/10255/dryad.35675 Article 2011 ftdryad https://doi.org/10.5061/dryad.n722g4d3 https://doi.org/10.5061/dryad.n722g4d3/1 https://doi.org/10.1038/hdy.2011.120 2020-01-01T14:54:41Z Recent studies in empirical population genetics have highlighted the importance of taking into account both neutral and adaptive genetic variation in characterizing microevolutionary dynamics. Here we explore the genetic population structure and the footprints of selection in four populations of the warm-temperate coastal fish, the gilthead sea bream (Sparus aurata), whose recent northward expansion has been linked to climate change. Samples were collected at four Atlantic locations, including Spain, Portugal, France and the South of Ireland, and genetically assayed using a suite of species-specific markers, including 15 putatively neutral microsatellites and 23 Expressed Sequence Tag-linked (ESTs) markers, as well as a portion of the mitochondrial DNA (mtDNA) Control Region. Two of the putatively neutral markers, Bld-10 and Ad-10, bore signatures of strong directional selection, particularly in the newly established Irish population, though the potential 'surfing effect' of rare alleles at the edge of the expansion front was also considered. Analyses after the removal of these loci suggest low but significant population structure likely affected by some degree of gene flow counteracting random genetic drift. No signal of historic divergence was detected at mtDNA. BLAST searches conducted with all 38 markers used failed to identify specific genomic regions associated to adaptive functions. However, the availability of genomic resources for this commercially valuable species is rapidly increasing, bringing us closer to the understanding of the interplay between selective and neutral evolutionary forces, shaping population divergence of an expanding species in a heterogeneous milieu. Article in Journal/Newspaper North East Atlantic Dryad Digital Repository (Duke University)
institution Open Polar
collection Dryad Digital Repository (Duke University)
op_collection_id ftdryad
language unknown
description Recent studies in empirical population genetics have highlighted the importance of taking into account both neutral and adaptive genetic variation in characterizing microevolutionary dynamics. Here we explore the genetic population structure and the footprints of selection in four populations of the warm-temperate coastal fish, the gilthead sea bream (Sparus aurata), whose recent northward expansion has been linked to climate change. Samples were collected at four Atlantic locations, including Spain, Portugal, France and the South of Ireland, and genetically assayed using a suite of species-specific markers, including 15 putatively neutral microsatellites and 23 Expressed Sequence Tag-linked (ESTs) markers, as well as a portion of the mitochondrial DNA (mtDNA) Control Region. Two of the putatively neutral markers, Bld-10 and Ad-10, bore signatures of strong directional selection, particularly in the newly established Irish population, though the potential 'surfing effect' of rare alleles at the edge of the expansion front was also considered. Analyses after the removal of these loci suggest low but significant population structure likely affected by some degree of gene flow counteracting random genetic drift. No signal of historic divergence was detected at mtDNA. BLAST searches conducted with all 38 markers used failed to identify specific genomic regions associated to adaptive functions. However, the availability of genomic resources for this commercially valuable species is rapidly increasing, bringing us closer to the understanding of the interplay between selective and neutral evolutionary forces, shaping population divergence of an expanding species in a heterogeneous milieu.
format Article in Journal/Newspaper
author Mariani, Stefano
Coscia, Ilaria
Vogiatzi, Emmanouella
Kotoulas, Georgios
Tsigenopoulos, Costas S.
spellingShingle Mariani, Stefano
Coscia, Ilaria
Vogiatzi, Emmanouella
Kotoulas, Georgios
Tsigenopoulos, Costas S.
Data from: Exploring neutral and adaptive processes in expanding populations of gilthead sea bream, Sparus aurata L., in the North-East Atlantic
author_facet Mariani, Stefano
Coscia, Ilaria
Vogiatzi, Emmanouella
Kotoulas, Georgios
Tsigenopoulos, Costas S.
author_sort Mariani, Stefano
title Data from: Exploring neutral and adaptive processes in expanding populations of gilthead sea bream, Sparus aurata L., in the North-East Atlantic
title_short Data from: Exploring neutral and adaptive processes in expanding populations of gilthead sea bream, Sparus aurata L., in the North-East Atlantic
title_full Data from: Exploring neutral and adaptive processes in expanding populations of gilthead sea bream, Sparus aurata L., in the North-East Atlantic
title_fullStr Data from: Exploring neutral and adaptive processes in expanding populations of gilthead sea bream, Sparus aurata L., in the North-East Atlantic
title_full_unstemmed Data from: Exploring neutral and adaptive processes in expanding populations of gilthead sea bream, Sparus aurata L., in the North-East Atlantic
title_sort data from: exploring neutral and adaptive processes in expanding populations of gilthead sea bream, sparus aurata l., in the north-east atlantic
publishDate 2011
url http://hdl.handle.net/10255/dryad.35675
https://doi.org/10.5061/dryad.n722g4d3
op_coverage North-East Atlantic
genre North East Atlantic
genre_facet North East Atlantic
op_relation doi:10.5061/dryad.n722g4d3/1
doi:10.1038/hdy.2011.120
PMID:22126850
doi:10.5061/dryad.n722g4d3
Mariani S, Coscia I, Vogiatzi E, Kotoulas G, Tsigenopoulos CS (2012) Exploring neutral and adaptive processes in expanding populations of gilthead sea bream, Sparus aurata L., in the North-East Atlantic. Heredity 108: 537-546.
http://hdl.handle.net/10255/dryad.35675
op_doi https://doi.org/10.5061/dryad.n722g4d3
https://doi.org/10.5061/dryad.n722g4d3/1
https://doi.org/10.1038/hdy.2011.120
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