Data from: Exploring neutral and adaptive processes in expanding populations of gilthead sea bream, Sparus aurata L., in the North-East Atlantic
Recent studies in empirical population genetics have highlighted the importance of taking into account both neutral and adaptive genetic variation in characterizing microevolutionary dynamics. Here we explore the genetic population structure and the footprints of selection in four populations of the...
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ftdryad:oai:v1.datadryad.org:10255/dryad.35675 2023-05-15T17:38:20+02:00 Data from: Exploring neutral and adaptive processes in expanding populations of gilthead sea bream, Sparus aurata L., in the North-East Atlantic Mariani, Stefano Coscia, Ilaria Vogiatzi, Emmanouella Kotoulas, Georgios Tsigenopoulos, Costas S. North-East Atlantic 2011-10-28T15:54:42Z http://hdl.handle.net/10255/dryad.35675 https://doi.org/10.5061/dryad.n722g4d3 unknown doi:10.5061/dryad.n722g4d3/1 doi:10.1038/hdy.2011.120 PMID:22126850 doi:10.5061/dryad.n722g4d3 Mariani S, Coscia I, Vogiatzi E, Kotoulas G, Tsigenopoulos CS (2012) Exploring neutral and adaptive processes in expanding populations of gilthead sea bream, Sparus aurata L., in the North-East Atlantic. Heredity 108: 537-546. http://hdl.handle.net/10255/dryad.35675 Article 2011 ftdryad https://doi.org/10.5061/dryad.n722g4d3 https://doi.org/10.5061/dryad.n722g4d3/1 https://doi.org/10.1038/hdy.2011.120 2020-01-01T14:54:41Z Recent studies in empirical population genetics have highlighted the importance of taking into account both neutral and adaptive genetic variation in characterizing microevolutionary dynamics. Here we explore the genetic population structure and the footprints of selection in four populations of the warm-temperate coastal fish, the gilthead sea bream (Sparus aurata), whose recent northward expansion has been linked to climate change. Samples were collected at four Atlantic locations, including Spain, Portugal, France and the South of Ireland, and genetically assayed using a suite of species-specific markers, including 15 putatively neutral microsatellites and 23 Expressed Sequence Tag-linked (ESTs) markers, as well as a portion of the mitochondrial DNA (mtDNA) Control Region. Two of the putatively neutral markers, Bld-10 and Ad-10, bore signatures of strong directional selection, particularly in the newly established Irish population, though the potential 'surfing effect' of rare alleles at the edge of the expansion front was also considered. Analyses after the removal of these loci suggest low but significant population structure likely affected by some degree of gene flow counteracting random genetic drift. No signal of historic divergence was detected at mtDNA. BLAST searches conducted with all 38 markers used failed to identify specific genomic regions associated to adaptive functions. However, the availability of genomic resources for this commercially valuable species is rapidly increasing, bringing us closer to the understanding of the interplay between selective and neutral evolutionary forces, shaping population divergence of an expanding species in a heterogeneous milieu. Article in Journal/Newspaper North East Atlantic Dryad Digital Repository (Duke University) |
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Dryad Digital Repository (Duke University) |
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ftdryad |
language |
unknown |
description |
Recent studies in empirical population genetics have highlighted the importance of taking into account both neutral and adaptive genetic variation in characterizing microevolutionary dynamics. Here we explore the genetic population structure and the footprints of selection in four populations of the warm-temperate coastal fish, the gilthead sea bream (Sparus aurata), whose recent northward expansion has been linked to climate change. Samples were collected at four Atlantic locations, including Spain, Portugal, France and the South of Ireland, and genetically assayed using a suite of species-specific markers, including 15 putatively neutral microsatellites and 23 Expressed Sequence Tag-linked (ESTs) markers, as well as a portion of the mitochondrial DNA (mtDNA) Control Region. Two of the putatively neutral markers, Bld-10 and Ad-10, bore signatures of strong directional selection, particularly in the newly established Irish population, though the potential 'surfing effect' of rare alleles at the edge of the expansion front was also considered. Analyses after the removal of these loci suggest low but significant population structure likely affected by some degree of gene flow counteracting random genetic drift. No signal of historic divergence was detected at mtDNA. BLAST searches conducted with all 38 markers used failed to identify specific genomic regions associated to adaptive functions. However, the availability of genomic resources for this commercially valuable species is rapidly increasing, bringing us closer to the understanding of the interplay between selective and neutral evolutionary forces, shaping population divergence of an expanding species in a heterogeneous milieu. |
format |
Article in Journal/Newspaper |
author |
Mariani, Stefano Coscia, Ilaria Vogiatzi, Emmanouella Kotoulas, Georgios Tsigenopoulos, Costas S. |
spellingShingle |
Mariani, Stefano Coscia, Ilaria Vogiatzi, Emmanouella Kotoulas, Georgios Tsigenopoulos, Costas S. Data from: Exploring neutral and adaptive processes in expanding populations of gilthead sea bream, Sparus aurata L., in the North-East Atlantic |
author_facet |
Mariani, Stefano Coscia, Ilaria Vogiatzi, Emmanouella Kotoulas, Georgios Tsigenopoulos, Costas S. |
author_sort |
Mariani, Stefano |
title |
Data from: Exploring neutral and adaptive processes in expanding populations of gilthead sea bream, Sparus aurata L., in the North-East Atlantic |
title_short |
Data from: Exploring neutral and adaptive processes in expanding populations of gilthead sea bream, Sparus aurata L., in the North-East Atlantic |
title_full |
Data from: Exploring neutral and adaptive processes in expanding populations of gilthead sea bream, Sparus aurata L., in the North-East Atlantic |
title_fullStr |
Data from: Exploring neutral and adaptive processes in expanding populations of gilthead sea bream, Sparus aurata L., in the North-East Atlantic |
title_full_unstemmed |
Data from: Exploring neutral and adaptive processes in expanding populations of gilthead sea bream, Sparus aurata L., in the North-East Atlantic |
title_sort |
data from: exploring neutral and adaptive processes in expanding populations of gilthead sea bream, sparus aurata l., in the north-east atlantic |
publishDate |
2011 |
url |
http://hdl.handle.net/10255/dryad.35675 https://doi.org/10.5061/dryad.n722g4d3 |
op_coverage |
North-East Atlantic |
genre |
North East Atlantic |
genre_facet |
North East Atlantic |
op_relation |
doi:10.5061/dryad.n722g4d3/1 doi:10.1038/hdy.2011.120 PMID:22126850 doi:10.5061/dryad.n722g4d3 Mariani S, Coscia I, Vogiatzi E, Kotoulas G, Tsigenopoulos CS (2012) Exploring neutral and adaptive processes in expanding populations of gilthead sea bream, Sparus aurata L., in the North-East Atlantic. Heredity 108: 537-546. http://hdl.handle.net/10255/dryad.35675 |
op_doi |
https://doi.org/10.5061/dryad.n722g4d3 https://doi.org/10.5061/dryad.n722g4d3/1 https://doi.org/10.1038/hdy.2011.120 |
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