Data from: Drones and convolutional neural networks facilitate automated and accurate cetacean species identification and photogrammetry

The flourishing application of drones within marine science provides more opportunity to conduct photogrammetric studies on large and varied populations of many different species. While these new platforms are increasing the size and availability of imagery datasets, established photogrammetry metho...

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Main Authors: Gray, Patrick C., Bierlich, Kevin C., Mantell, Sydney A., Friedlaender, Ari S., Goldbogen, Jeremy A., Johnston, David W.
Format: Article in Journal/Newspaper
Language:unknown
Published: 2019
Subjects:
Online Access:http://hdl.handle.net/10255/dryad.220866
https://doi.org/10.5061/dryad.7482v2n
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spelling ftdryad:oai:v1.datadryad.org:10255/dryad.220866 2023-05-15T14:04:38+02:00 Data from: Drones and convolutional neural networks facilitate automated and accurate cetacean species identification and photogrammetry Gray, Patrick C. Bierlich, Kevin C. Mantell, Sydney A. Friedlaender, Ari S. Goldbogen, Jeremy A. Johnston, David W. United States California Durham Western Antarctic Peninsula Antarctica 2019-07-24T14:55:23Z http://hdl.handle.net/10255/dryad.220866 https://doi.org/10.5061/dryad.7482v2n unknown doi:10.5061/dryad.7482v2n/1 doi:10.5061/dryad.7482v2n/2 doi:10.5061/dryad.7482v2n/3 doi:10.5061/dryad.7482v2n/4 doi:10.1111/2041-210x.13246 doi:10.5061/dryad.7482v2n Gray PC, Bierlich KC, Mantell SA, Friedlaender AS, Goldbogen JA, Johnston DW (2019) Drones and convolutional neural networks facilitate automated and accurate cetacean species identification and photogrammetry. Methods in Ecology and Evolution. http://hdl.handle.net/10255/dryad.220866 photogrammetry cetaceans convolutional neural network unoccupied aerial systems drones species identification deep learning population assessments Article 2019 ftdryad https://doi.org/10.5061/dryad.7482v2n https://doi.org/10.5061/dryad.7482v2n/1 https://doi.org/10.5061/dryad.7482v2n/2 https://doi.org/10.5061/dryad.7482v2n/3 https://doi.org/10.5061/dryad.7482v2n/4 https://doi.org/10.1111/2041-210x.13246 2020-01-01T16:31:00Z The flourishing application of drones within marine science provides more opportunity to conduct photogrammetric studies on large and varied populations of many different species. While these new platforms are increasing the size and availability of imagery datasets, established photogrammetry methods require considerable manual input, allowing individual bias in techniques to influence measurements, increasing error and magnifying the time required to apply these techniques. Here, we introduce the next generation of photogrammetry methods utilizing a convolutional neural network to demonstrate the potential of a deep learning‐based photogrammetry system for automatic species identification and measurement. We then present the same data analysed using conventional techniques to validate our automatic methods. Our results compare favorably across both techniques, correctly predicting whale species with 98% accuracy (57/58) for humpback whales, minke whales, and blue whales. Ninety percent of automated length measurements were within 5% of manual measurements, providing sufficient resolution to inform morphometric studies and establish size classes of whales automatically. The results of this study indicate that deep learning techniques applied to survey programs that collect large archives of imagery may help researchers and managers move quickly past analytical bottlenecks and provide more time for abundance estimation, distributional research, and ecological assessments. Article in Journal/Newspaper Antarc* Antarctic Antarctic Peninsula Antarctica Dryad Digital Repository (Duke University) Antarctic Antarctic Peninsula
institution Open Polar
collection Dryad Digital Repository (Duke University)
op_collection_id ftdryad
language unknown
topic photogrammetry
cetaceans
convolutional neural network
unoccupied aerial systems
drones
species identification
deep learning
population assessments
spellingShingle photogrammetry
cetaceans
convolutional neural network
unoccupied aerial systems
drones
species identification
deep learning
population assessments
Gray, Patrick C.
Bierlich, Kevin C.
Mantell, Sydney A.
Friedlaender, Ari S.
Goldbogen, Jeremy A.
Johnston, David W.
Data from: Drones and convolutional neural networks facilitate automated and accurate cetacean species identification and photogrammetry
topic_facet photogrammetry
cetaceans
convolutional neural network
unoccupied aerial systems
drones
species identification
deep learning
population assessments
description The flourishing application of drones within marine science provides more opportunity to conduct photogrammetric studies on large and varied populations of many different species. While these new platforms are increasing the size and availability of imagery datasets, established photogrammetry methods require considerable manual input, allowing individual bias in techniques to influence measurements, increasing error and magnifying the time required to apply these techniques. Here, we introduce the next generation of photogrammetry methods utilizing a convolutional neural network to demonstrate the potential of a deep learning‐based photogrammetry system for automatic species identification and measurement. We then present the same data analysed using conventional techniques to validate our automatic methods. Our results compare favorably across both techniques, correctly predicting whale species with 98% accuracy (57/58) for humpback whales, minke whales, and blue whales. Ninety percent of automated length measurements were within 5% of manual measurements, providing sufficient resolution to inform morphometric studies and establish size classes of whales automatically. The results of this study indicate that deep learning techniques applied to survey programs that collect large archives of imagery may help researchers and managers move quickly past analytical bottlenecks and provide more time for abundance estimation, distributional research, and ecological assessments.
format Article in Journal/Newspaper
author Gray, Patrick C.
Bierlich, Kevin C.
Mantell, Sydney A.
Friedlaender, Ari S.
Goldbogen, Jeremy A.
Johnston, David W.
author_facet Gray, Patrick C.
Bierlich, Kevin C.
Mantell, Sydney A.
Friedlaender, Ari S.
Goldbogen, Jeremy A.
Johnston, David W.
author_sort Gray, Patrick C.
title Data from: Drones and convolutional neural networks facilitate automated and accurate cetacean species identification and photogrammetry
title_short Data from: Drones and convolutional neural networks facilitate automated and accurate cetacean species identification and photogrammetry
title_full Data from: Drones and convolutional neural networks facilitate automated and accurate cetacean species identification and photogrammetry
title_fullStr Data from: Drones and convolutional neural networks facilitate automated and accurate cetacean species identification and photogrammetry
title_full_unstemmed Data from: Drones and convolutional neural networks facilitate automated and accurate cetacean species identification and photogrammetry
title_sort data from: drones and convolutional neural networks facilitate automated and accurate cetacean species identification and photogrammetry
publishDate 2019
url http://hdl.handle.net/10255/dryad.220866
https://doi.org/10.5061/dryad.7482v2n
op_coverage United States
California
Durham
Western Antarctic Peninsula
Antarctica
geographic Antarctic
Antarctic Peninsula
geographic_facet Antarctic
Antarctic Peninsula
genre Antarc*
Antarctic
Antarctic Peninsula
Antarctica
genre_facet Antarc*
Antarctic
Antarctic Peninsula
Antarctica
op_relation doi:10.5061/dryad.7482v2n/1
doi:10.5061/dryad.7482v2n/2
doi:10.5061/dryad.7482v2n/3
doi:10.5061/dryad.7482v2n/4
doi:10.1111/2041-210x.13246
doi:10.5061/dryad.7482v2n
Gray PC, Bierlich KC, Mantell SA, Friedlaender AS, Goldbogen JA, Johnston DW (2019) Drones and convolutional neural networks facilitate automated and accurate cetacean species identification and photogrammetry. Methods in Ecology and Evolution.
http://hdl.handle.net/10255/dryad.220866
op_doi https://doi.org/10.5061/dryad.7482v2n
https://doi.org/10.5061/dryad.7482v2n/1
https://doi.org/10.5061/dryad.7482v2n/2
https://doi.org/10.5061/dryad.7482v2n/3
https://doi.org/10.5061/dryad.7482v2n/4
https://doi.org/10.1111/2041-210x.13246
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