Data from: Heterosis is common and inbreeding depression absent in natural populations of Arabidopsis thaliana

The importance of genetic drift in shaping patterns of adaptive genetic variation in nature is poorly known. Genetic drift should drive partially recessive deleterious mutations to high frequency, and inter‐population crosses may therefore exhibit heterosis (increased fitness relative to intra‐popul...

Full description

Bibliographic Details
Main Authors: Oakley, Christopher G., Lundemo, Sverre, Ågren, Jon, Schemske, Douglas W.
Format: Article in Journal/Newspaper
Language:unknown
Published: 2019
Subjects:
Online Access:http://hdl.handle.net/10255/dryad.210671
https://doi.org/10.5061/dryad.2fb36bc
id ftdryad:oai:v1.datadryad.org:10255/dryad.210671
record_format openpolar
spelling ftdryad:oai:v1.datadryad.org:10255/dryad.210671 2023-05-15T16:12:10+02:00 Data from: Heterosis is common and inbreeding depression absent in natural populations of Arabidopsis thaliana Oakley, Christopher G. Lundemo, Sverre Ågren, Jon Schemske, Douglas W. Europe Holocene 2019-03-19T21:35:49Z http://hdl.handle.net/10255/dryad.210671 https://doi.org/10.5061/dryad.2fb36bc unknown doi:10.5061/dryad.2fb36bc/1 doi:10.5061/dryad.2fb36bc/2 doi:10.5061/dryad.2fb36bc/3 doi:10.5061/dryad.2fb36bc/4 doi:10.5061/dryad.2fb36bc/5 doi:10.5061/dryad.2fb36bc/6 doi:10.5061/dryad.2fb36bc/7 doi:10.5061/dryad.2fb36bc/9 doi:10.5061/dryad.2fb36bc/10 doi:10.5061/dryad.2fb36bc/11 doi:10.5061/dryad.2fb36bc/12 doi:10.5061/dryad.2fb36bc/13 doi:10.5061/dryad.2fb36bc/14 doi:10.5061/dryad.2fb36bc/15 doi:10.5061/dryad.2fb36bc/16 doi:10.5061/dryad.2fb36bc/17 doi:10.5061/dryad.2fb36bc/18 doi:10.5061/dryad.2fb36bc/19 doi:10.5061/dryad.2fb36bc/20 doi:10.5061/dryad.2fb36bc/8 doi:10.5061/dryad.2fb36bc/21 doi:10.5061/dryad.2fb36bc/22 doi:10.5061/dryad.2fb36bc/23 doi:10.5061/dryad.2fb36bc/24 doi:10.5061/dryad.2fb36bc/25 doi:10.5061/dryad.2fb36bc/26 doi:10.5061/dryad.2fb36bc/27 doi:10.5061/dryad.2fb36bc/28 doi:10.5061/dryad.2fb36bc/29 doi:10.5061/dryad.2fb36bc/30 doi:10.5061/dryad.2fb36bc/31 doi:10.1111/jeb.13441 doi:10.5061/dryad.2fb36bc Oakley CG, Lundemo S, Ågren J, Schemske DW (2019) Heterosis is common and inbreeding depression absent in natural populations of Arabidopsis thaliana. Journal of Evolutionary Biology, online in advance of print. http://hdl.handle.net/10255/dryad.210671 Quantitative genetics Population genetics Ecological genetics Adaptation Heterosis Inbreeding depression Genetic drift Genetic distance Outbreeding depression Article 2019 ftdryad https://doi.org/10.5061/dryad.2fb36bc https://doi.org/10.5061/dryad.2fb36bc/1 https://doi.org/10.5061/dryad.2fb36bc/2 https://doi.org/10.5061/dryad.2fb36bc/3 https://doi.org/10.5061/dryad.2fb36bc/4 https://doi.org/10.5061/dryad.2fb36bc/5 https 2020-01-01T16:25:29Z The importance of genetic drift in shaping patterns of adaptive genetic variation in nature is poorly known. Genetic drift should drive partially recessive deleterious mutations to high frequency, and inter‐population crosses may therefore exhibit heterosis (increased fitness relative to intra‐population crosses). Low genetic diversity and greater genetic distance between populations should increase the magnitude of heterosis. Moreover, drift and selection should remove strongly deleterious recessive alleles from individual populations, resulting in reduced inbreeding depression. To estimate heterosis, we crossed 90 independent line pairs of Arabidopsis thaliana from 15 pairs of natural populations sampled across Fennoscandia, and crossed an additional 41 line pairs from a subset of 4 of these populations to estimate inbreeding depression. We measured lifetime fitness of crosses relative to parents in a large outdoor common garden (8448 plants in total) in central Sweden. To examine the effects of genetic diversity and genetic distance on heterosis, we genotyped parental lines for 869 SNPs. Overall, genetic variation within populations was low (median expected heterozygosity = 0.02), and genetic differentiation was high (median FST = 0.82). Crosses between 10 of 15 population pairs exhibited significant heterosis, with magnitudes of heterosis as high as 117%. We found no significant inbreeding depression, suggesting that the observed heterosis is due to fixation of mildly deleterious alleles within populations. Widespread and substantial heterosis indicates an important role for drift in shaping genetic variation, but there was no significant relationship between fitness of crosses relative to parents and genetic diversity or genetic distance between populations. Article in Journal/Newspaper Fennoscandia Dryad Digital Repository (Duke University)
institution Open Polar
collection Dryad Digital Repository (Duke University)
op_collection_id ftdryad
language unknown
topic Quantitative genetics
Population genetics
Ecological genetics
Adaptation
Heterosis
Inbreeding depression
Genetic drift
Genetic distance
Outbreeding depression
spellingShingle Quantitative genetics
Population genetics
Ecological genetics
Adaptation
Heterosis
Inbreeding depression
Genetic drift
Genetic distance
Outbreeding depression
Oakley, Christopher G.
Lundemo, Sverre
Ågren, Jon
Schemske, Douglas W.
Data from: Heterosis is common and inbreeding depression absent in natural populations of Arabidopsis thaliana
topic_facet Quantitative genetics
Population genetics
Ecological genetics
Adaptation
Heterosis
Inbreeding depression
Genetic drift
Genetic distance
Outbreeding depression
description The importance of genetic drift in shaping patterns of adaptive genetic variation in nature is poorly known. Genetic drift should drive partially recessive deleterious mutations to high frequency, and inter‐population crosses may therefore exhibit heterosis (increased fitness relative to intra‐population crosses). Low genetic diversity and greater genetic distance between populations should increase the magnitude of heterosis. Moreover, drift and selection should remove strongly deleterious recessive alleles from individual populations, resulting in reduced inbreeding depression. To estimate heterosis, we crossed 90 independent line pairs of Arabidopsis thaliana from 15 pairs of natural populations sampled across Fennoscandia, and crossed an additional 41 line pairs from a subset of 4 of these populations to estimate inbreeding depression. We measured lifetime fitness of crosses relative to parents in a large outdoor common garden (8448 plants in total) in central Sweden. To examine the effects of genetic diversity and genetic distance on heterosis, we genotyped parental lines for 869 SNPs. Overall, genetic variation within populations was low (median expected heterozygosity = 0.02), and genetic differentiation was high (median FST = 0.82). Crosses between 10 of 15 population pairs exhibited significant heterosis, with magnitudes of heterosis as high as 117%. We found no significant inbreeding depression, suggesting that the observed heterosis is due to fixation of mildly deleterious alleles within populations. Widespread and substantial heterosis indicates an important role for drift in shaping genetic variation, but there was no significant relationship between fitness of crosses relative to parents and genetic diversity or genetic distance between populations.
format Article in Journal/Newspaper
author Oakley, Christopher G.
Lundemo, Sverre
Ågren, Jon
Schemske, Douglas W.
author_facet Oakley, Christopher G.
Lundemo, Sverre
Ågren, Jon
Schemske, Douglas W.
author_sort Oakley, Christopher G.
title Data from: Heterosis is common and inbreeding depression absent in natural populations of Arabidopsis thaliana
title_short Data from: Heterosis is common and inbreeding depression absent in natural populations of Arabidopsis thaliana
title_full Data from: Heterosis is common and inbreeding depression absent in natural populations of Arabidopsis thaliana
title_fullStr Data from: Heterosis is common and inbreeding depression absent in natural populations of Arabidopsis thaliana
title_full_unstemmed Data from: Heterosis is common and inbreeding depression absent in natural populations of Arabidopsis thaliana
title_sort data from: heterosis is common and inbreeding depression absent in natural populations of arabidopsis thaliana
publishDate 2019
url http://hdl.handle.net/10255/dryad.210671
https://doi.org/10.5061/dryad.2fb36bc
op_coverage Europe
Holocene
genre Fennoscandia
genre_facet Fennoscandia
op_relation doi:10.5061/dryad.2fb36bc/1
doi:10.5061/dryad.2fb36bc/2
doi:10.5061/dryad.2fb36bc/3
doi:10.5061/dryad.2fb36bc/4
doi:10.5061/dryad.2fb36bc/5
doi:10.5061/dryad.2fb36bc/6
doi:10.5061/dryad.2fb36bc/7
doi:10.5061/dryad.2fb36bc/9
doi:10.5061/dryad.2fb36bc/10
doi:10.5061/dryad.2fb36bc/11
doi:10.5061/dryad.2fb36bc/12
doi:10.5061/dryad.2fb36bc/13
doi:10.5061/dryad.2fb36bc/14
doi:10.5061/dryad.2fb36bc/15
doi:10.5061/dryad.2fb36bc/16
doi:10.5061/dryad.2fb36bc/17
doi:10.5061/dryad.2fb36bc/18
doi:10.5061/dryad.2fb36bc/19
doi:10.5061/dryad.2fb36bc/20
doi:10.5061/dryad.2fb36bc/8
doi:10.5061/dryad.2fb36bc/21
doi:10.5061/dryad.2fb36bc/22
doi:10.5061/dryad.2fb36bc/23
doi:10.5061/dryad.2fb36bc/24
doi:10.5061/dryad.2fb36bc/25
doi:10.5061/dryad.2fb36bc/26
doi:10.5061/dryad.2fb36bc/27
doi:10.5061/dryad.2fb36bc/28
doi:10.5061/dryad.2fb36bc/29
doi:10.5061/dryad.2fb36bc/30
doi:10.5061/dryad.2fb36bc/31
doi:10.1111/jeb.13441
doi:10.5061/dryad.2fb36bc
Oakley CG, Lundemo S, Ågren J, Schemske DW (2019) Heterosis is common and inbreeding depression absent in natural populations of Arabidopsis thaliana. Journal of Evolutionary Biology, online in advance of print.
http://hdl.handle.net/10255/dryad.210671
op_doi https://doi.org/10.5061/dryad.2fb36bc
https://doi.org/10.5061/dryad.2fb36bc/1
https://doi.org/10.5061/dryad.2fb36bc/2
https://doi.org/10.5061/dryad.2fb36bc/3
https://doi.org/10.5061/dryad.2fb36bc/4
https://doi.org/10.5061/dryad.2fb36bc/5
https
_version_ 1765997427503923200