Duplicate read removal script

This scripts identifies all reads with identical sequences and only writes the first occurence of a read to the output.

Bibliographic Details
Main Authors: Hooper, Rebecca, van der Valk, Tom, Brealey, Jaelle, Alberdi, Antton, Durban, John W., Fearnbach, Holly, Robertson, Kelly M., Baird, Robin W., Hanson, M. Bradley, Wade, Paul, Gilbert, M Thomas P., Morin, Philip A., Wolf, Jochen B.W., Foote, Andrew D., Guschanski, Katerina
Format: Dataset
Language:unknown
Published: 2018
Subjects:
killer whale
microbiome
diatom
Pacific
Antarc*
Antarctica
Killer Whale
Killer whale
Online Access:http://hdl.handle.net/10255/dryad.187022
https://doi.org/10.5061/dryad.c8v3rv6/3
id ftdryad:oai:v1.datadryad.org:10255/dryad.187022
record_format openpolar
spelling ftdryad:oai:v1.datadryad.org:10255/dryad.187022 2023-05-15T13:51:25+02:00 Duplicate read removal script Hooper, Rebecca van der Valk, Tom Brealey, Jaelle Alberdi, Antton Durban, John W. Fearnbach, Holly Robertson, Kelly M. Baird, Robin W. Hanson, M. Bradley Wade, Paul Gilbert, M Thomas P. Morin, Philip A. Wolf, Jochen B.W. Foote, Andrew D. Guschanski, Katerina North Pacific Antarctica 2018-11-13T17:15:25Z 1019 http://hdl.handle.net/10255/dryad.187022 https://doi.org/10.5061/dryad.c8v3rv6/3 unknown doi:10.5061/dryad.c8v3rv6 doi:10.5061/dryad.c8v3rv6/3 http://hdl.handle.net/10255/dryad.187022 http://creativecommons.org/publicdomain/zero/1.0/ CC0 PDM killer whale microbiome diatom Dataset 2018 ftdryad https://doi.org/10.5061/dryad.c8v3rv6/3 https://doi.org/10.5061/dryad.c8v3rv6 2020-01-01T16:13:01Z This scripts identifies all reads with identical sequences and only writes the first occurence of a read to the output. Dataset Antarc* Antarctica Killer Whale Killer whale Dryad Digital Repository (Duke University) Pacific
institution Open Polar
collection Dryad Digital Repository (Duke University)
op_collection_id ftdryad
language unknown
topic killer whale
microbiome
diatom
spellingShingle killer whale
microbiome
diatom
Hooper, Rebecca
van der Valk, Tom
Brealey, Jaelle
Alberdi, Antton
Durban, John W.
Fearnbach, Holly
Robertson, Kelly M.
Baird, Robin W.
Hanson, M. Bradley
Wade, Paul
Gilbert, M Thomas P.
Morin, Philip A.
Wolf, Jochen B.W.
Foote, Andrew D.
Guschanski, Katerina
Duplicate read removal script
topic_facet killer whale
microbiome
diatom
description This scripts identifies all reads with identical sequences and only writes the first occurence of a read to the output.
format Dataset
author Hooper, Rebecca
van der Valk, Tom
Brealey, Jaelle
Alberdi, Antton
Durban, John W.
Fearnbach, Holly
Robertson, Kelly M.
Baird, Robin W.
Hanson, M. Bradley
Wade, Paul
Gilbert, M Thomas P.
Morin, Philip A.
Wolf, Jochen B.W.
Foote, Andrew D.
Guschanski, Katerina
author_facet Hooper, Rebecca
van der Valk, Tom
Brealey, Jaelle
Alberdi, Antton
Durban, John W.
Fearnbach, Holly
Robertson, Kelly M.
Baird, Robin W.
Hanson, M. Bradley
Wade, Paul
Gilbert, M Thomas P.
Morin, Philip A.
Wolf, Jochen B.W.
Foote, Andrew D.
Guschanski, Katerina
author_sort Hooper, Rebecca
title Duplicate read removal script
title_short Duplicate read removal script
title_full Duplicate read removal script
title_fullStr Duplicate read removal script
title_full_unstemmed Duplicate read removal script
title_sort duplicate read removal script
publishDate 2018
url http://hdl.handle.net/10255/dryad.187022
https://doi.org/10.5061/dryad.c8v3rv6/3
op_coverage North Pacific
Antarctica
geographic Pacific
geographic_facet Pacific
genre Antarc*
Antarctica
Killer Whale
Killer whale
genre_facet Antarc*
Antarctica
Killer Whale
Killer whale
op_relation doi:10.5061/dryad.c8v3rv6
doi:10.5061/dryad.c8v3rv6/3
http://hdl.handle.net/10255/dryad.187022
op_rights http://creativecommons.org/publicdomain/zero/1.0/
op_rightsnorm CC0
PDM
op_doi https://doi.org/10.5061/dryad.c8v3rv6/3
https://doi.org/10.5061/dryad.c8v3rv6
_version_ 1766255291142242304

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