Genotype file

A total of 12143 brown trout (Salmo trutta) SNPs are provided in Illumina format with first four columns represent Name ("dRAD locus id"-"position of SNP in dRAD locus"), chromosome (in Salmo salar), position in chromosome and strand (orientation of mapped dRAD locus on the S. sa...

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Bibliographic Details
Main Authors: Ahmad, Freed, Debes, Paul, Palomar, Gemma, Vasemägi, Anti
Format: Dataset
Language:unknown
Published: 2018
Subjects:
Climate Change
Host Resistance
Parasite-induced Anemia
wild population
Association Study
Bioinfomatics
Phyloinfomatics
Salmo salar
Online Access:http://hdl.handle.net/10255/dryad.169671
https://doi.org/10.5061/dryad.rk744/2
id ftdryad:oai:v1.datadryad.org:10255/dryad.169671
record_format openpolar
spelling ftdryad:oai:v1.datadryad.org:10255/dryad.169671 2023-05-15T18:09:47+02:00 Genotype file Ahmad, Freed Debes, Paul Palomar, Gemma Vasemägi, Anti 2018-02-01T14:38:00Z 9648559 http://hdl.handle.net/10255/dryad.169671 https://doi.org/10.5061/dryad.rk744/2 unknown doi:10.5061/dryad.rk744 doi:10.5061/dryad.rk744/2 http://hdl.handle.net/10255/dryad.169671 http://creativecommons.org/publicdomain/zero/1.0/ CC0 PDM Climate Change Host Resistance Parasite-induced Anemia wild population Association Study Bioinfomatics Phyloinfomatics Dataset 2018 ftdryad https://doi.org/10.5061/dryad.rk744/2 https://doi.org/10.5061/dryad.rk744 2020-01-01T16:03:46Z A total of 12143 brown trout (Salmo trutta) SNPs are provided in Illumina format with first four columns represent Name ("dRAD locus id"-"position of SNP in dRAD locus"), chromosome (in Salmo salar), position in chromosome and strand (orientation of mapped dRAD locus on the S. salar chromosome). Other columns represent samples and each row represent a SNP. The file is required by the R script SNPFiltering_LD_AssociationAnalysis.R which will filter it to 7661 SNPs. Dataset Salmo salar Dryad Digital Repository (Duke University)
institution Open Polar
collection Dryad Digital Repository (Duke University)
op_collection_id ftdryad
language unknown
topic Climate Change
Host Resistance
Parasite-induced Anemia
wild population
Association Study
Bioinfomatics
Phyloinfomatics
spellingShingle Climate Change
Host Resistance
Parasite-induced Anemia
wild population
Association Study
Bioinfomatics
Phyloinfomatics
Ahmad, Freed
Debes, Paul
Palomar, Gemma
Vasemägi, Anti
Genotype file
topic_facet Climate Change
Host Resistance
Parasite-induced Anemia
wild population
Association Study
Bioinfomatics
Phyloinfomatics
description A total of 12143 brown trout (Salmo trutta) SNPs are provided in Illumina format with first four columns represent Name ("dRAD locus id"-"position of SNP in dRAD locus"), chromosome (in Salmo salar), position in chromosome and strand (orientation of mapped dRAD locus on the S. salar chromosome). Other columns represent samples and each row represent a SNP. The file is required by the R script SNPFiltering_LD_AssociationAnalysis.R which will filter it to 7661 SNPs.
format Dataset
author Ahmad, Freed
Debes, Paul
Palomar, Gemma
Vasemägi, Anti
author_facet Ahmad, Freed
Debes, Paul
Palomar, Gemma
Vasemägi, Anti
author_sort Ahmad, Freed
title Genotype file
title_short Genotype file
title_full Genotype file
title_fullStr Genotype file
title_full_unstemmed Genotype file
title_sort genotype file
publishDate 2018
url http://hdl.handle.net/10255/dryad.169671
https://doi.org/10.5061/dryad.rk744/2
genre Salmo salar
genre_facet Salmo salar
op_relation doi:10.5061/dryad.rk744
doi:10.5061/dryad.rk744/2
http://hdl.handle.net/10255/dryad.169671
op_rights http://creativecommons.org/publicdomain/zero/1.0/
op_rightsnorm CC0
PDM
op_doi https://doi.org/10.5061/dryad.rk744/2
https://doi.org/10.5061/dryad.rk744
_version_ 1766182442011459584

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