SNP array data excluding linked loci (6,658 SNPs)

• Main Authors: Barth, Julia M. I., Berg, Paul R., Jonsson, Per R., Bonanomi, Sara, Corell, Hanna, Hemmer-Hansen, Jakob, Jakobsen, Kjetill S., Johannesson, Kerstin, Jorde, Per Erik, Knutsen, Halvor, Moksnes, Per-Olav, Star, Bastiaan, Stenseth, Nils Chr., Svedäng, Henrik, Jentoft, Sissel, André, Carl
• Format: Dataset
• Language: unknown
• Published: 2017
• Subjects: Population Divergence; Gene Flow; Ecological Adaptation; Chromosomal Inversion; Biophysical Modeling; Kattegat; atlantic cod; Gadus morhua
• Online Access: http://hdl.handle.net/10255/dryad.147287; https://doi.org/10.5061/dryad.3f1c8/2

SNP array data of 527 Atlantic cod (Gadus morhua), genotyped at 6,658 loci (dataset excluding linked SNPs). Genepop format (http://genepop.curtin.edu.au/help_input.html): first line: datafile information; second line: loci names (dbSNP accession numbers); line 3-543 genotypes for each locus (01=A, 02=C, 03=G, 04=T), one individual per row, sampling sites are separated by “pop”. All SNPs are referred to by their database of Single Nucleotide Polymorphisms (dbSNP) accession numbers, available from: http://www.ncbi.nlm.nih.gov/SNP. First three characters of individual names correspond to population IDs: ENG, English Channel; NOR, North Sea; TVE, Tvedestrand; SOP, Soppekilen; HEL, Hellefjord; FRI/GRE, Grenland; OSL, Oslofjord; IDD, Iddefjord; SKA, Skagerrak; GUL, Gullmarsfjord; HAV, Havstensfjord; KAT, Kattegat; ORE, Öresund; BEL, Belt Sea.