Data from: Clones or clans: the genetic structure of a deep-sea sponge, Aphrocallistes vastus, in unique sponge reefs of British Columbia, Canada

Understanding patterns of reproduction, dispersal and recruitment in deep-sea communities is increasingly important with the need to manage resource extraction and conserve species diversity. Glass sponges are usually found in deep water (>1000 m) worldwide but form kilometre-long reefs on the co...

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Main Authors: Brown, Rachel R., Davis, Corey S., Leys, Sally P.
Format: Article in Journal/Newspaper
Language:unknown
Published: 2017
Subjects:
Sog
Online Access:http://hdl.handle.net/10255/dryad.131807
https://doi.org/10.5061/dryad.sc0nf
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spelling ftdryad:oai:v1.datadryad.org:10255/dryad.131807 2023-05-15T18:49:01+02:00 Data from: Clones or clans: the genetic structure of a deep-sea sponge, Aphrocallistes vastus, in unique sponge reefs of British Columbia, Canada Brown, Rachel R. Davis, Corey S. Leys, Sally P. 2017-03-13T17:12:36Z http://hdl.handle.net/10255/dryad.131807 https://doi.org/10.5061/dryad.sc0nf unknown doi:10.5061/dryad.sc0nf/1 doi:10.5061/dryad.sc0nf/2 doi:10.5061/dryad.sc0nf/3 doi:10.1111/mec.13982 doi:10.5061/dryad.sc0nf 0962-1083 http://hdl.handle.net/10255/dryad.131807 deep-sea genomic duplication glass sponge reefs next generation sequencing population structure single nucleotide polymorphisms Article 2017 ftdryad https://doi.org/10.5061/dryad.sc0nf https://doi.org/10.5061/dryad.sc0nf/1 https://doi.org/10.5061/dryad.sc0nf/2 https://doi.org/10.5061/dryad.sc0nf/3 https://doi.org/10.1111/mec.13982 2020-01-01T15:43:24Z Understanding patterns of reproduction, dispersal and recruitment in deep-sea communities is increasingly important with the need to manage resource extraction and conserve species diversity. Glass sponges are usually found in deep water (>1000 m) worldwide but form kilometre-long reefs on the continental shelf of British Columbia and Alaska that are under threat from trawling and resource exploration. Due to their deep-water habitat, larvae have not yet been found and the level of genetic connectivity between reefs and nonreef communities is unknown. The genetic structure of Aphrocallistes vastus, the primary reef-building species in the Strait of Georgia (SoG) British Columbia, was studied using single nucleotide polymorphisms (SNPs). Pairwise comparisons of multilocus genotypes were used to assess whether sexual reproduction is common. Structure was examined 1) between individuals in reefs, 2) between reefs and 3) between sites in and outside the SoG. Sixty-seven SNPs were genotyped in 91 samples from areas in and around the SoG, including four sponge reefs and nearby nonreef sites. The results show that sponge reefs are formed through sexual reproduction. Within a reef and across the SoG basin, the genetic distance between individuals does not vary with geographic distance (r = −0.005 to 0.014), but populations within the SoG basin are genetically distinct from populations in Barkley Sound, on the west coast of Vancouver Island. Population structure was seen across all sample sites (global FST = 0.248), especially between SoG and non-SoG locations (average pairwise FST = 0.251). Our results suggest that genetic mixing occurs across sponge reefs via larvae that disperse widely. Article in Journal/Newspaper Alaska Glass sponges Dryad Digital Repository (Duke University) Canada British Columbia ENVELOPE(-125.003,-125.003,54.000,54.000) Sog ENVELOPE(-20.972,-20.972,63.993,63.993)
institution Open Polar
collection Dryad Digital Repository (Duke University)
op_collection_id ftdryad
language unknown
topic deep-sea
genomic duplication
glass sponge reefs
next generation sequencing
population structure
single nucleotide polymorphisms
spellingShingle deep-sea
genomic duplication
glass sponge reefs
next generation sequencing
population structure
single nucleotide polymorphisms
Brown, Rachel R.
Davis, Corey S.
Leys, Sally P.
Data from: Clones or clans: the genetic structure of a deep-sea sponge, Aphrocallistes vastus, in unique sponge reefs of British Columbia, Canada
topic_facet deep-sea
genomic duplication
glass sponge reefs
next generation sequencing
population structure
single nucleotide polymorphisms
description Understanding patterns of reproduction, dispersal and recruitment in deep-sea communities is increasingly important with the need to manage resource extraction and conserve species diversity. Glass sponges are usually found in deep water (>1000 m) worldwide but form kilometre-long reefs on the continental shelf of British Columbia and Alaska that are under threat from trawling and resource exploration. Due to their deep-water habitat, larvae have not yet been found and the level of genetic connectivity between reefs and nonreef communities is unknown. The genetic structure of Aphrocallistes vastus, the primary reef-building species in the Strait of Georgia (SoG) British Columbia, was studied using single nucleotide polymorphisms (SNPs). Pairwise comparisons of multilocus genotypes were used to assess whether sexual reproduction is common. Structure was examined 1) between individuals in reefs, 2) between reefs and 3) between sites in and outside the SoG. Sixty-seven SNPs were genotyped in 91 samples from areas in and around the SoG, including four sponge reefs and nearby nonreef sites. The results show that sponge reefs are formed through sexual reproduction. Within a reef and across the SoG basin, the genetic distance between individuals does not vary with geographic distance (r = −0.005 to 0.014), but populations within the SoG basin are genetically distinct from populations in Barkley Sound, on the west coast of Vancouver Island. Population structure was seen across all sample sites (global FST = 0.248), especially between SoG and non-SoG locations (average pairwise FST = 0.251). Our results suggest that genetic mixing occurs across sponge reefs via larvae that disperse widely.
format Article in Journal/Newspaper
author Brown, Rachel R.
Davis, Corey S.
Leys, Sally P.
author_facet Brown, Rachel R.
Davis, Corey S.
Leys, Sally P.
author_sort Brown, Rachel R.
title Data from: Clones or clans: the genetic structure of a deep-sea sponge, Aphrocallistes vastus, in unique sponge reefs of British Columbia, Canada
title_short Data from: Clones or clans: the genetic structure of a deep-sea sponge, Aphrocallistes vastus, in unique sponge reefs of British Columbia, Canada
title_full Data from: Clones or clans: the genetic structure of a deep-sea sponge, Aphrocallistes vastus, in unique sponge reefs of British Columbia, Canada
title_fullStr Data from: Clones or clans: the genetic structure of a deep-sea sponge, Aphrocallistes vastus, in unique sponge reefs of British Columbia, Canada
title_full_unstemmed Data from: Clones or clans: the genetic structure of a deep-sea sponge, Aphrocallistes vastus, in unique sponge reefs of British Columbia, Canada
title_sort data from: clones or clans: the genetic structure of a deep-sea sponge, aphrocallistes vastus, in unique sponge reefs of british columbia, canada
publishDate 2017
url http://hdl.handle.net/10255/dryad.131807
https://doi.org/10.5061/dryad.sc0nf
long_lat ENVELOPE(-125.003,-125.003,54.000,54.000)
ENVELOPE(-20.972,-20.972,63.993,63.993)
geographic Canada
British Columbia
Sog
geographic_facet Canada
British Columbia
Sog
genre Alaska
Glass sponges
genre_facet Alaska
Glass sponges
op_relation doi:10.5061/dryad.sc0nf/1
doi:10.5061/dryad.sc0nf/2
doi:10.5061/dryad.sc0nf/3
doi:10.1111/mec.13982
doi:10.5061/dryad.sc0nf
0962-1083
http://hdl.handle.net/10255/dryad.131807
op_doi https://doi.org/10.5061/dryad.sc0nf
https://doi.org/10.5061/dryad.sc0nf/1
https://doi.org/10.5061/dryad.sc0nf/2
https://doi.org/10.5061/dryad.sc0nf/3
https://doi.org/10.1111/mec.13982
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