Data from: The biogeography of the atlantic salmon (Salmo salar) gut microbiome
Although understood in many vertebrate systems, the natural diversity of host-associated microbiota has been little studied in teleosts. For migratory fishes, successful exploitation of multiple habitats may affect and be affected by the composition of the intestinal microbiome. We collected 96 Salm...
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ftdryad:oai:v1.datadryad.org:10255/dryad.123383 2023-05-15T15:32:07+02:00 Data from: The biogeography of the atlantic salmon (Salmo salar) gut microbiome Llewellyn, Martin S. McGinnity, Philip Dionne, Melanie Letourneau, Justine Thonier, Florian Carvalho, Gary R. Creer, Simon Derome, Nicolas Canada Ireland Greenland 2016-08-16T20:44:00Z http://hdl.handle.net/10255/dryad.123383 https://doi.org/10.5061/dryad.f0h49 unknown 10;5;2016 doi:10.5061/dryad.f0h49/1 doi:10.1038/ismej.2015.189 PMID:26517698 doi:10.5061/dryad.f0h49 Llewellyn MS, McGinnity P, Dionne M, Letourneau J, Thonier F, Carvalho GR, Creer S, Derome N (2015) The biogeography of the atlantic salmon (Salmo salar) gut microbiome. The ISME Journal 10(5):1280-4. http://hdl.handle.net/10255/dryad.123383 Article 2016 ftdryad https://doi.org/10.5061/dryad.f0h49 https://doi.org/10.5061/dryad.f0h49/1 https://doi.org/10.1038/ismej.2015.189 2020-01-01T15:38:35Z Although understood in many vertebrate systems, the natural diversity of host-associated microbiota has been little studied in teleosts. For migratory fishes, successful exploitation of multiple habitats may affect and be affected by the composition of the intestinal microbiome. We collected 96 Salmo salar from across the Atlantic encompassing both freshwater and marine phases. Dramatic differences between environmental and gut bacterial communities were observed. Furthermore, community composition was not significantly impacted by geography. Instead life-cycle stage strongly defined both the diversity and identity of microbial assemblages in the gut, with evidence for community destabilisation in migratory phases. Mycoplasmataceae phylotypes were abundantly recovered in all life-cycle stages. Patterns of Mycoplasmataceae phylotype recruitment to the intestinal microbial community among sites and life-cycle stages support a dual role for deterministic and stochastic processes in defining the composition of the S. salar gut microbiome. Article in Journal/Newspaper Atlantic salmon Greenland Salmo salar Dryad Digital Repository (Duke University) Canada Greenland |
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Dryad Digital Repository (Duke University) |
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description |
Although understood in many vertebrate systems, the natural diversity of host-associated microbiota has been little studied in teleosts. For migratory fishes, successful exploitation of multiple habitats may affect and be affected by the composition of the intestinal microbiome. We collected 96 Salmo salar from across the Atlantic encompassing both freshwater and marine phases. Dramatic differences between environmental and gut bacterial communities were observed. Furthermore, community composition was not significantly impacted by geography. Instead life-cycle stage strongly defined both the diversity and identity of microbial assemblages in the gut, with evidence for community destabilisation in migratory phases. Mycoplasmataceae phylotypes were abundantly recovered in all life-cycle stages. Patterns of Mycoplasmataceae phylotype recruitment to the intestinal microbial community among sites and life-cycle stages support a dual role for deterministic and stochastic processes in defining the composition of the S. salar gut microbiome. |
format |
Article in Journal/Newspaper |
author |
Llewellyn, Martin S. McGinnity, Philip Dionne, Melanie Letourneau, Justine Thonier, Florian Carvalho, Gary R. Creer, Simon Derome, Nicolas |
spellingShingle |
Llewellyn, Martin S. McGinnity, Philip Dionne, Melanie Letourneau, Justine Thonier, Florian Carvalho, Gary R. Creer, Simon Derome, Nicolas Data from: The biogeography of the atlantic salmon (Salmo salar) gut microbiome |
author_facet |
Llewellyn, Martin S. McGinnity, Philip Dionne, Melanie Letourneau, Justine Thonier, Florian Carvalho, Gary R. Creer, Simon Derome, Nicolas |
author_sort |
Llewellyn, Martin S. |
title |
Data from: The biogeography of the atlantic salmon (Salmo salar) gut microbiome |
title_short |
Data from: The biogeography of the atlantic salmon (Salmo salar) gut microbiome |
title_full |
Data from: The biogeography of the atlantic salmon (Salmo salar) gut microbiome |
title_fullStr |
Data from: The biogeography of the atlantic salmon (Salmo salar) gut microbiome |
title_full_unstemmed |
Data from: The biogeography of the atlantic salmon (Salmo salar) gut microbiome |
title_sort |
data from: the biogeography of the atlantic salmon (salmo salar) gut microbiome |
publishDate |
2016 |
url |
http://hdl.handle.net/10255/dryad.123383 https://doi.org/10.5061/dryad.f0h49 |
op_coverage |
Canada Ireland Greenland |
geographic |
Canada Greenland |
geographic_facet |
Canada Greenland |
genre |
Atlantic salmon Greenland Salmo salar |
genre_facet |
Atlantic salmon Greenland Salmo salar |
op_relation |
10;5;2016 doi:10.5061/dryad.f0h49/1 doi:10.1038/ismej.2015.189 PMID:26517698 doi:10.5061/dryad.f0h49 Llewellyn MS, McGinnity P, Dionne M, Letourneau J, Thonier F, Carvalho GR, Creer S, Derome N (2015) The biogeography of the atlantic salmon (Salmo salar) gut microbiome. The ISME Journal 10(5):1280-4. http://hdl.handle.net/10255/dryad.123383 |
op_doi |
https://doi.org/10.5061/dryad.f0h49 https://doi.org/10.5061/dryad.f0h49/1 https://doi.org/10.1038/ismej.2015.189 |
_version_ |
1766362615903158272 |