Data from: Fine-scale assessment of genetic diversity of trembling aspen in northwestern North America

Background In North America, the last ice age is the most recent event with severe consequences on boreal species’ ranges. Phylogeographic patterns of range expansion in trembling aspen (Populus tremuloides) suggested that Beringia is likely to be a refugium and the “ice-free corridor” in Alberta ma...

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Main Authors: Latutrie, Mathieu, Bergeron, Yves, Tremblay, Francine
Format: Article in Journal/Newspaper
Language:unknown
Published: 2016
Subjects:
Online Access:http://hdl.handle.net/10255/dryad.110958
https://doi.org/10.5061/dryad.6q5g3
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spelling ftdryad:oai:v1.datadryad.org:10255/dryad.110958 2023-05-15T18:49:03+02:00 Data from: Fine-scale assessment of genetic diversity of trembling aspen in northwestern North America Latutrie, Mathieu Bergeron, Yves Tremblay, Francine 2016-10-28T16:14:11Z http://hdl.handle.net/10255/dryad.110958 https://doi.org/10.5061/dryad.6q5g3 unknown doi:10.5061/dryad.6q5g3/1 doi:10.1186/s12862-016-0810-1 PMID:27782797 doi:10.5061/dryad.6q5g3 Latutrie M, Bergeron Y, Tremblay F (2016) Fine-scale assessment of genetic diversity of trembling aspen in northwestern North America. BMC Evolutionary Biology 16: 231. http://hdl.handle.net/10255/dryad.110958 phylogeography aspen Article 2016 ftdryad https://doi.org/10.5061/dryad.6q5g3 https://doi.org/10.5061/dryad.6q5g3/1 https://doi.org/10.1186/s12862-016-0810-1 2020-01-01T15:32:12Z Background In North America, the last ice age is the most recent event with severe consequences on boreal species’ ranges. Phylogeographic patterns of range expansion in trembling aspen (Populus tremuloides) suggested that Beringia is likely to be a refugium and the “ice-free corridor” in Alberta may represent a region where small populations persisted during the last glacial maximum (LGM). The purpose of this study was to ascertain whether the origins of trembling aspen in western North America are reflected in the patterns of neutral genetic diversity and population structure. A total of 28 sites were sampled covering the northwestern part of aspen’s distribution, from Saskatchewan to Alaska. Twelve microsatellite markers were used to describe patterns of genetic diversity. The genetic structure of trembling aspen populations was assessed by using multivariate analyses, Mantel correlograms, neighbor-joining trees and Bayesian analysis. Results Microsatellite markers revealed little to no neutral genetic structure of P. tremuloides populations in northwestern North America. Low differentiation among populations and small isolation by distance (IBD) were observed. The most probable number of clusters detected by STRUCTURE was K = 3 (∆K = 5.9). The individuals in the populations of the 3 clusters share a common gene pool and showed a high level of admixture. No evidence was found that either Beringia or the “ice-free corridor” were refugia. Highest allelic richness (AR) and lowest heterozygosity (Ho) were observed in Alberta foothills of the Rocky Mountains. Conclusions Contrary to our hypothesis, our results showed that microsatellite markers revealed little to no genetic structure in P. tremuloides populations. Consequently, no divergent populations were observed near supposed refugia. The lack of detectable refugia in Beringia and in the “ice-free corridor” was due to high levels of gene flow between trembling apsen populations. More favorable environmental conditions for sexual reproduction and successful trembling aspen seedling establishment may have contributed to increase allelic richness through recombination in populations from the Albertan foothills of the Rocky Mountains. Article in Journal/Newspaper Alaska Beringia Dryad Digital Repository (Duke University)
institution Open Polar
collection Dryad Digital Repository (Duke University)
op_collection_id ftdryad
language unknown
topic phylogeography
aspen
spellingShingle phylogeography
aspen
Latutrie, Mathieu
Bergeron, Yves
Tremblay, Francine
Data from: Fine-scale assessment of genetic diversity of trembling aspen in northwestern North America
topic_facet phylogeography
aspen
description Background In North America, the last ice age is the most recent event with severe consequences on boreal species’ ranges. Phylogeographic patterns of range expansion in trembling aspen (Populus tremuloides) suggested that Beringia is likely to be a refugium and the “ice-free corridor” in Alberta may represent a region where small populations persisted during the last glacial maximum (LGM). The purpose of this study was to ascertain whether the origins of trembling aspen in western North America are reflected in the patterns of neutral genetic diversity and population structure. A total of 28 sites were sampled covering the northwestern part of aspen’s distribution, from Saskatchewan to Alaska. Twelve microsatellite markers were used to describe patterns of genetic diversity. The genetic structure of trembling aspen populations was assessed by using multivariate analyses, Mantel correlograms, neighbor-joining trees and Bayesian analysis. Results Microsatellite markers revealed little to no neutral genetic structure of P. tremuloides populations in northwestern North America. Low differentiation among populations and small isolation by distance (IBD) were observed. The most probable number of clusters detected by STRUCTURE was K = 3 (∆K = 5.9). The individuals in the populations of the 3 clusters share a common gene pool and showed a high level of admixture. No evidence was found that either Beringia or the “ice-free corridor” were refugia. Highest allelic richness (AR) and lowest heterozygosity (Ho) were observed in Alberta foothills of the Rocky Mountains. Conclusions Contrary to our hypothesis, our results showed that microsatellite markers revealed little to no genetic structure in P. tremuloides populations. Consequently, no divergent populations were observed near supposed refugia. The lack of detectable refugia in Beringia and in the “ice-free corridor” was due to high levels of gene flow between trembling apsen populations. More favorable environmental conditions for sexual reproduction and successful trembling aspen seedling establishment may have contributed to increase allelic richness through recombination in populations from the Albertan foothills of the Rocky Mountains.
format Article in Journal/Newspaper
author Latutrie, Mathieu
Bergeron, Yves
Tremblay, Francine
author_facet Latutrie, Mathieu
Bergeron, Yves
Tremblay, Francine
author_sort Latutrie, Mathieu
title Data from: Fine-scale assessment of genetic diversity of trembling aspen in northwestern North America
title_short Data from: Fine-scale assessment of genetic diversity of trembling aspen in northwestern North America
title_full Data from: Fine-scale assessment of genetic diversity of trembling aspen in northwestern North America
title_fullStr Data from: Fine-scale assessment of genetic diversity of trembling aspen in northwestern North America
title_full_unstemmed Data from: Fine-scale assessment of genetic diversity of trembling aspen in northwestern North America
title_sort data from: fine-scale assessment of genetic diversity of trembling aspen in northwestern north america
publishDate 2016
url http://hdl.handle.net/10255/dryad.110958
https://doi.org/10.5061/dryad.6q5g3
genre Alaska
Beringia
genre_facet Alaska
Beringia
op_relation doi:10.5061/dryad.6q5g3/1
doi:10.1186/s12862-016-0810-1
PMID:27782797
doi:10.5061/dryad.6q5g3
Latutrie M, Bergeron Y, Tremblay F (2016) Fine-scale assessment of genetic diversity of trembling aspen in northwestern North America. BMC Evolutionary Biology 16: 231.
http://hdl.handle.net/10255/dryad.110958
op_doi https://doi.org/10.5061/dryad.6q5g3
https://doi.org/10.5061/dryad.6q5g3/1
https://doi.org/10.1186/s12862-016-0810-1
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