Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region
Abstract Background Malaria continues being a public health problem worldwide. Plasmodium vivax is the species causing the largest number of cases of malaria in Asia and South America. Due to the lack of a completely effective anti-malarial vaccine, controlling this disease has been based on transmi...
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ftdoajarticles:oai:doaj.org/article:fb17029d261740d99d28c32edd26aed0 2023-05-15T15:10:08+02:00 Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region Juan Ricardo Cubides Paola Andrea Camargo-Ayala Carlos Hernando Niño Diego Garzón-Ospina Anggie Ortega-Ortegón Estefany Ospina-Cantillo María Fernanda Orduz-Durán Manuel Elkin Patarroyo Manuel Alfonso Patarroyo 2018-03-01T00:00:00Z https://doi.org/10.1186/s12936-018-2286-5 https://doaj.org/article/fb17029d261740d99d28c32edd26aed0 EN eng BMC http://link.springer.com/article/10.1186/s12936-018-2286-5 https://doaj.org/toc/1475-2875 doi:10.1186/s12936-018-2286-5 1475-2875 https://doaj.org/article/fb17029d261740d99d28c32edd26aed0 Malaria Journal, Vol 17, Iss 1, Pp 1-9 (2018) Malaria Plasmodium vivax Antimalarial drug resistance Amazonian region Colombia pvdhfr Arctic medicine. Tropical medicine RC955-962 Infectious and parasitic diseases RC109-216 article 2018 ftdoajarticles https://doi.org/10.1186/s12936-018-2286-5 2022-12-31T00:49:59Z Abstract Background Malaria continues being a public health problem worldwide. Plasmodium vivax is the species causing the largest number of cases of malaria in Asia and South America. Due to the lack of a completely effective anti-malarial vaccine, controlling this disease has been based on transmission vector management, rapid diagnosis and suitable treatment. However, parasite resistance to anti-malarial drugs has become a major yet-to-be-overcome challenge. This study was thus aimed at determining pvmdr1, pvdhfr, pvdhps and pvcrt-o gene mutations and haplotypes from field samples obtained from an endemic area in the Colombian Amazonian region. Methods Fifty samples of parasite DNA infected by a single P. vivax strain from symptomatic patients from the Amazonas department in Colombia were analysed by PCR and the pvdhfr, pvdhps, pvmdr1 and pvcrt-o genes were sequenced. Diversity estimators were calculated from the sequences and the haplotypes circulating in the Colombian Amazonian region were obtained. Conclusion pvdhfr, pvdhps, pvmdr1 and pvcrt-o genes in the Colombian Amazonian region are characterized by low genetic diversity. Some resistance-associated mutations were found circulating in this population. New variants are also being reported. A selective sweep signal was located in pvdhfr and pvmdr1 genes, suggesting that these mutations (or some of them) could be providing an adaptive advantage. Article in Journal/Newspaper Arctic Directory of Open Access Journals: DOAJ Articles Arctic Malaria Journal 17 1 |
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Open Polar |
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Directory of Open Access Journals: DOAJ Articles |
op_collection_id |
ftdoajarticles |
language |
English |
topic |
Malaria Plasmodium vivax Antimalarial drug resistance Amazonian region Colombia pvdhfr Arctic medicine. Tropical medicine RC955-962 Infectious and parasitic diseases RC109-216 |
spellingShingle |
Malaria Plasmodium vivax Antimalarial drug resistance Amazonian region Colombia pvdhfr Arctic medicine. Tropical medicine RC955-962 Infectious and parasitic diseases RC109-216 Juan Ricardo Cubides Paola Andrea Camargo-Ayala Carlos Hernando Niño Diego Garzón-Ospina Anggie Ortega-Ortegón Estefany Ospina-Cantillo María Fernanda Orduz-Durán Manuel Elkin Patarroyo Manuel Alfonso Patarroyo Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region |
topic_facet |
Malaria Plasmodium vivax Antimalarial drug resistance Amazonian region Colombia pvdhfr Arctic medicine. Tropical medicine RC955-962 Infectious and parasitic diseases RC109-216 |
description |
Abstract Background Malaria continues being a public health problem worldwide. Plasmodium vivax is the species causing the largest number of cases of malaria in Asia and South America. Due to the lack of a completely effective anti-malarial vaccine, controlling this disease has been based on transmission vector management, rapid diagnosis and suitable treatment. However, parasite resistance to anti-malarial drugs has become a major yet-to-be-overcome challenge. This study was thus aimed at determining pvmdr1, pvdhfr, pvdhps and pvcrt-o gene mutations and haplotypes from field samples obtained from an endemic area in the Colombian Amazonian region. Methods Fifty samples of parasite DNA infected by a single P. vivax strain from symptomatic patients from the Amazonas department in Colombia were analysed by PCR and the pvdhfr, pvdhps, pvmdr1 and pvcrt-o genes were sequenced. Diversity estimators were calculated from the sequences and the haplotypes circulating in the Colombian Amazonian region were obtained. Conclusion pvdhfr, pvdhps, pvmdr1 and pvcrt-o genes in the Colombian Amazonian region are characterized by low genetic diversity. Some resistance-associated mutations were found circulating in this population. New variants are also being reported. A selective sweep signal was located in pvdhfr and pvmdr1 genes, suggesting that these mutations (or some of them) could be providing an adaptive advantage. |
format |
Article in Journal/Newspaper |
author |
Juan Ricardo Cubides Paola Andrea Camargo-Ayala Carlos Hernando Niño Diego Garzón-Ospina Anggie Ortega-Ortegón Estefany Ospina-Cantillo María Fernanda Orduz-Durán Manuel Elkin Patarroyo Manuel Alfonso Patarroyo |
author_facet |
Juan Ricardo Cubides Paola Andrea Camargo-Ayala Carlos Hernando Niño Diego Garzón-Ospina Anggie Ortega-Ortegón Estefany Ospina-Cantillo María Fernanda Orduz-Durán Manuel Elkin Patarroyo Manuel Alfonso Patarroyo |
author_sort |
Juan Ricardo Cubides |
title |
Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region |
title_short |
Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region |
title_full |
Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region |
title_fullStr |
Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region |
title_full_unstemmed |
Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region |
title_sort |
simultaneous detection of plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the colombian amazonian region |
publisher |
BMC |
publishDate |
2018 |
url |
https://doi.org/10.1186/s12936-018-2286-5 https://doaj.org/article/fb17029d261740d99d28c32edd26aed0 |
geographic |
Arctic |
geographic_facet |
Arctic |
genre |
Arctic |
genre_facet |
Arctic |
op_source |
Malaria Journal, Vol 17, Iss 1, Pp 1-9 (2018) |
op_relation |
http://link.springer.com/article/10.1186/s12936-018-2286-5 https://doaj.org/toc/1475-2875 doi:10.1186/s12936-018-2286-5 1475-2875 https://doaj.org/article/fb17029d261740d99d28c32edd26aed0 |
op_doi |
https://doi.org/10.1186/s12936-018-2286-5 |
container_title |
Malaria Journal |
container_volume |
17 |
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1 |
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1766341188432953344 |