Recent increase of genetic diversity in Plasmodium vivax population in the Republic of Korea

Abstract Background The reemergence of Plasmodium vivax in South Korea since 1993 represents a serious public health concern. Despite the importance in understanding genetic diversity for control strategies, however, studies remain inconclusive with the general premise that due to low rate of malari...

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Published in:Malaria Journal
Main Authors: Lee Wonja, Mita Toshihiro, Palacpac Nirianne MQ, Kim Jung-Yeon, Honma Hajime, Horii Toshihiro, Tanabe Kazuyuki
Format: Article in Journal/Newspaper
Language:English
Published: BMC 2011
Subjects:
Online Access:https://doi.org/10.1186/1475-2875-10-257
https://doaj.org/article/f95be2091b9e4d548e2bb1e44e471737
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spelling ftdoajarticles:oai:doaj.org/article:f95be2091b9e4d548e2bb1e44e471737 2023-05-15T15:12:20+02:00 Recent increase of genetic diversity in Plasmodium vivax population in the Republic of Korea Lee Wonja Mita Toshihiro Palacpac Nirianne MQ Kim Jung-Yeon Honma Hajime Horii Toshihiro Tanabe Kazuyuki 2011-09-01T00:00:00Z https://doi.org/10.1186/1475-2875-10-257 https://doaj.org/article/f95be2091b9e4d548e2bb1e44e471737 EN eng BMC http://www.malariajournal.com/content/10/1/257 https://doaj.org/toc/1475-2875 doi:10.1186/1475-2875-10-257 1475-2875 https://doaj.org/article/f95be2091b9e4d548e2bb1e44e471737 Malaria Journal, Vol 10, Iss 1, p 257 (2011) Arctic medicine. Tropical medicine RC955-962 Infectious and parasitic diseases RC109-216 article 2011 ftdoajarticles https://doi.org/10.1186/1475-2875-10-257 2022-12-31T08:11:51Z Abstract Background The reemergence of Plasmodium vivax in South Korea since 1993 represents a serious public health concern. Despite the importance in understanding genetic diversity for control strategies, however, studies remain inconclusive with the general premise that due to low rate of malaria transmission, there is generally low genetic diversity with very few strains involved. In this study, the genetic diversity and population structure of P. vivax in South Korea were explored by analysing microsatellite polymorphism. Methods Sequences for 13 microsatellite loci distributed across the twelve chromosomes of P. vivax were obtained from 58 South Korean isolates collected during two sampling periods, namely 1997-2000 and 2007. The sequences were used for the analysis of expected heterozygosity and multilocus genotype diversity. Population structure was evaluated using STRUCTURE version 2.3.2. Linkage disequilibrium was also analysed to investigate the extent of outbreeding in the P. vivax population. Results Mean expected heterozygosity significantly increased from 0.382 in 1997-2000 to 0.545 in 2007 ( P < 0.05). The number of multilocus genotypes was 7 and 27; and genotype diversity was statistically significant ( P < 0.01) at 0.661 and 0.995 in 1997-2000 and 2007, respectively. Analysis by STRUCTURE showed a more complex population structure in 2007 than in 1997-2000. Linkage disequilibrium between 13 microsatellites, although significant in both time points, was notably lower in 2007. Conclusions The present microsatellite analysis clearly showed recent increase of genetic diversity and recent relaxation of the strong population structure observed in 1997-2000. These results suggest that multiple genotypes not present previously recently migrated into South Korea, accompanied by substantial outbreeding between different genotypes. Article in Journal/Newspaper Arctic Directory of Open Access Journals: DOAJ Articles Arctic Malaria Journal 10 1 257
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Arctic medicine. Tropical medicine
RC955-962
Infectious and parasitic diseases
RC109-216
spellingShingle Arctic medicine. Tropical medicine
RC955-962
Infectious and parasitic diseases
RC109-216
Lee Wonja
Mita Toshihiro
Palacpac Nirianne MQ
Kim Jung-Yeon
Honma Hajime
Horii Toshihiro
Tanabe Kazuyuki
Recent increase of genetic diversity in Plasmodium vivax population in the Republic of Korea
topic_facet Arctic medicine. Tropical medicine
RC955-962
Infectious and parasitic diseases
RC109-216
description Abstract Background The reemergence of Plasmodium vivax in South Korea since 1993 represents a serious public health concern. Despite the importance in understanding genetic diversity for control strategies, however, studies remain inconclusive with the general premise that due to low rate of malaria transmission, there is generally low genetic diversity with very few strains involved. In this study, the genetic diversity and population structure of P. vivax in South Korea were explored by analysing microsatellite polymorphism. Methods Sequences for 13 microsatellite loci distributed across the twelve chromosomes of P. vivax were obtained from 58 South Korean isolates collected during two sampling periods, namely 1997-2000 and 2007. The sequences were used for the analysis of expected heterozygosity and multilocus genotype diversity. Population structure was evaluated using STRUCTURE version 2.3.2. Linkage disequilibrium was also analysed to investigate the extent of outbreeding in the P. vivax population. Results Mean expected heterozygosity significantly increased from 0.382 in 1997-2000 to 0.545 in 2007 ( P < 0.05). The number of multilocus genotypes was 7 and 27; and genotype diversity was statistically significant ( P < 0.01) at 0.661 and 0.995 in 1997-2000 and 2007, respectively. Analysis by STRUCTURE showed a more complex population structure in 2007 than in 1997-2000. Linkage disequilibrium between 13 microsatellites, although significant in both time points, was notably lower in 2007. Conclusions The present microsatellite analysis clearly showed recent increase of genetic diversity and recent relaxation of the strong population structure observed in 1997-2000. These results suggest that multiple genotypes not present previously recently migrated into South Korea, accompanied by substantial outbreeding between different genotypes.
format Article in Journal/Newspaper
author Lee Wonja
Mita Toshihiro
Palacpac Nirianne MQ
Kim Jung-Yeon
Honma Hajime
Horii Toshihiro
Tanabe Kazuyuki
author_facet Lee Wonja
Mita Toshihiro
Palacpac Nirianne MQ
Kim Jung-Yeon
Honma Hajime
Horii Toshihiro
Tanabe Kazuyuki
author_sort Lee Wonja
title Recent increase of genetic diversity in Plasmodium vivax population in the Republic of Korea
title_short Recent increase of genetic diversity in Plasmodium vivax population in the Republic of Korea
title_full Recent increase of genetic diversity in Plasmodium vivax population in the Republic of Korea
title_fullStr Recent increase of genetic diversity in Plasmodium vivax population in the Republic of Korea
title_full_unstemmed Recent increase of genetic diversity in Plasmodium vivax population in the Republic of Korea
title_sort recent increase of genetic diversity in plasmodium vivax population in the republic of korea
publisher BMC
publishDate 2011
url https://doi.org/10.1186/1475-2875-10-257
https://doaj.org/article/f95be2091b9e4d548e2bb1e44e471737
geographic Arctic
geographic_facet Arctic
genre Arctic
genre_facet Arctic
op_source Malaria Journal, Vol 10, Iss 1, p 257 (2011)
op_relation http://www.malariajournal.com/content/10/1/257
https://doaj.org/toc/1475-2875
doi:10.1186/1475-2875-10-257
1475-2875
https://doaj.org/article/f95be2091b9e4d548e2bb1e44e471737
op_doi https://doi.org/10.1186/1475-2875-10-257
container_title Malaria Journal
container_volume 10
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