Ecology of Subglacial Lake Vostok (Antarctica), Based on Metagenomic/Metatranscriptomic Analyses of Accretion Ice

Lake Vostok is the largest of the nearly 400 subglacial Antarctic lakes and has been continuously buried by glacial ice for 15 million years. Extreme cold, heat (from possible hydrothermal activity), pressure (from the overriding glacier) and dissolved oxygen (delivered by melting meteoric ice), in...

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Published in:Biology
Main Authors: Tom D'Elia, Robyn Edgar, Ram Veerapaneni, Zeynep A. Koçer, Scott O. Rogers, Yury M. Shtarkman
Format: Article in Journal/Newspaper
Language:English
Published: MDPI AG 2013
Subjects:
Online Access:https://doi.org/10.3390/biology2020629
https://doaj.org/article/f259ffab26694fc7a9aca712793ac007
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spelling ftdoajarticles:oai:doaj.org/article:f259ffab26694fc7a9aca712793ac007 2023-10-01T03:52:09+02:00 Ecology of Subglacial Lake Vostok (Antarctica), Based on Metagenomic/Metatranscriptomic Analyses of Accretion Ice Tom D'Elia Robyn Edgar Ram Veerapaneni Zeynep A. Koçer Scott O. Rogers Yury M. Shtarkman 2013-03-01T00:00:00Z https://doi.org/10.3390/biology2020629 https://doaj.org/article/f259ffab26694fc7a9aca712793ac007 EN eng MDPI AG http://www.mdpi.com/2079-7737/2/2/629 https://doaj.org/toc/2079-7737 doi:10.3390/biology2020629 2079-7737 https://doaj.org/article/f259ffab26694fc7a9aca712793ac007 Biology, Vol 2, Iss 2, Pp 629-650 (2013) Lake Vostok subglacial lake metagenomic metatranscriptomic marine aquatic Biology (General) QH301-705.5 article 2013 ftdoajarticles https://doi.org/10.3390/biology2020629 2023-09-03T00:40:54Z Lake Vostok is the largest of the nearly 400 subglacial Antarctic lakes and has been continuously buried by glacial ice for 15 million years. Extreme cold, heat (from possible hydrothermal activity), pressure (from the overriding glacier) and dissolved oxygen (delivered by melting meteoric ice), in addition to limited nutrients and complete darkness, combine to produce one of the most extreme environments on Earth. Metagenomic/metatranscriptomic analyses of ice that accreted over a shallow embayment and over the southern main lake basin indicate the presence of thousands of species of organisms (94% Bacteria, 6% Eukarya, and two Archaea). The predominant bacterial sequences were closest to those from species of Firmicutes, Proteobacteria and Actinobacteria, while the predominant eukaryotic sequences were most similar to those from species of ascomycetous and basidiomycetous Fungi. Based on the sequence data, the lake appears to contain a mixture of autotrophs and heterotrophs capable of performing nitrogen fixation, nitrogen cycling, carbon fixation and nutrient recycling. Sequences closest to those of psychrophiles and thermophiles indicate a cold lake with possible hydrothermal activity. Sequences most similar to those from marine and aquatic species suggest the presence of marine and freshwater regions. Article in Journal/Newspaper Antarc* Antarctic Antarctica Directory of Open Access Journals: DOAJ Articles Antarctic Lake Vostok ENVELOPE(106.000,106.000,-77.500,-77.500) Vostok Subglacial Lake ENVELOPE(106.000,106.000,-77.500,-77.500) Biology 2 2 629 650
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Lake Vostok
subglacial lake
metagenomic
metatranscriptomic
marine
aquatic
Biology (General)
QH301-705.5
spellingShingle Lake Vostok
subglacial lake
metagenomic
metatranscriptomic
marine
aquatic
Biology (General)
QH301-705.5
Tom D'Elia
Robyn Edgar
Ram Veerapaneni
Zeynep A. Koçer
Scott O. Rogers
Yury M. Shtarkman
Ecology of Subglacial Lake Vostok (Antarctica), Based on Metagenomic/Metatranscriptomic Analyses of Accretion Ice
topic_facet Lake Vostok
subglacial lake
metagenomic
metatranscriptomic
marine
aquatic
Biology (General)
QH301-705.5
description Lake Vostok is the largest of the nearly 400 subglacial Antarctic lakes and has been continuously buried by glacial ice for 15 million years. Extreme cold, heat (from possible hydrothermal activity), pressure (from the overriding glacier) and dissolved oxygen (delivered by melting meteoric ice), in addition to limited nutrients and complete darkness, combine to produce one of the most extreme environments on Earth. Metagenomic/metatranscriptomic analyses of ice that accreted over a shallow embayment and over the southern main lake basin indicate the presence of thousands of species of organisms (94% Bacteria, 6% Eukarya, and two Archaea). The predominant bacterial sequences were closest to those from species of Firmicutes, Proteobacteria and Actinobacteria, while the predominant eukaryotic sequences were most similar to those from species of ascomycetous and basidiomycetous Fungi. Based on the sequence data, the lake appears to contain a mixture of autotrophs and heterotrophs capable of performing nitrogen fixation, nitrogen cycling, carbon fixation and nutrient recycling. Sequences closest to those of psychrophiles and thermophiles indicate a cold lake with possible hydrothermal activity. Sequences most similar to those from marine and aquatic species suggest the presence of marine and freshwater regions.
format Article in Journal/Newspaper
author Tom D'Elia
Robyn Edgar
Ram Veerapaneni
Zeynep A. Koçer
Scott O. Rogers
Yury M. Shtarkman
author_facet Tom D'Elia
Robyn Edgar
Ram Veerapaneni
Zeynep A. Koçer
Scott O. Rogers
Yury M. Shtarkman
author_sort Tom D'Elia
title Ecology of Subglacial Lake Vostok (Antarctica), Based on Metagenomic/Metatranscriptomic Analyses of Accretion Ice
title_short Ecology of Subglacial Lake Vostok (Antarctica), Based on Metagenomic/Metatranscriptomic Analyses of Accretion Ice
title_full Ecology of Subglacial Lake Vostok (Antarctica), Based on Metagenomic/Metatranscriptomic Analyses of Accretion Ice
title_fullStr Ecology of Subglacial Lake Vostok (Antarctica), Based on Metagenomic/Metatranscriptomic Analyses of Accretion Ice
title_full_unstemmed Ecology of Subglacial Lake Vostok (Antarctica), Based on Metagenomic/Metatranscriptomic Analyses of Accretion Ice
title_sort ecology of subglacial lake vostok (antarctica), based on metagenomic/metatranscriptomic analyses of accretion ice
publisher MDPI AG
publishDate 2013
url https://doi.org/10.3390/biology2020629
https://doaj.org/article/f259ffab26694fc7a9aca712793ac007
long_lat ENVELOPE(106.000,106.000,-77.500,-77.500)
ENVELOPE(106.000,106.000,-77.500,-77.500)
geographic Antarctic
Lake Vostok
Vostok Subglacial Lake
geographic_facet Antarctic
Lake Vostok
Vostok Subglacial Lake
genre Antarc*
Antarctic
Antarctica
genre_facet Antarc*
Antarctic
Antarctica
op_source Biology, Vol 2, Iss 2, Pp 629-650 (2013)
op_relation http://www.mdpi.com/2079-7737/2/2/629
https://doaj.org/toc/2079-7737
doi:10.3390/biology2020629
2079-7737
https://doaj.org/article/f259ffab26694fc7a9aca712793ac007
op_doi https://doi.org/10.3390/biology2020629
container_title Biology
container_volume 2
container_issue 2
container_start_page 629
op_container_end_page 650
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