Ocean Acidification Triggers Cell Signaling, Suppress Immune and Calcification in the Pacific Oyster Larvae

Elevated carbon dioxide levels in ocean waters, an anthropogenic stressor, can alter the chemical equilibrium of seawater through a process called ocean acidification (OA). The resultant reduction of pH can be detrimental during the early developmental stages of the commercially important edible Pac...

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Published in:Frontiers in Marine Science
Main Authors: Ramadoss Dineshram, Shu Xiao, Ginger Wai Kuen Ko, Jun Li, Kovilingal Smrithi, Vengatesen Thiyagarajan, Yang Zhang, Ziniu Yu
Format: Article in Journal/Newspaper
Language:English
Published: Frontiers Media S.A. 2021
Subjects:
Q
Online Access:https://doi.org/10.3389/fmars.2021.782583
https://doaj.org/article/f17d78af6e054151bf3f75b24f70ac07
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spelling ftdoajarticles:oai:doaj.org/article:f17d78af6e054151bf3f75b24f70ac07 2023-05-15T15:58:28+02:00 Ocean Acidification Triggers Cell Signaling, Suppress Immune and Calcification in the Pacific Oyster Larvae Ramadoss Dineshram Shu Xiao Ginger Wai Kuen Ko Jun Li Kovilingal Smrithi Vengatesen Thiyagarajan Yang Zhang Ziniu Yu 2021-12-01T00:00:00Z https://doi.org/10.3389/fmars.2021.782583 https://doaj.org/article/f17d78af6e054151bf3f75b24f70ac07 EN eng Frontiers Media S.A. https://www.frontiersin.org/articles/10.3389/fmars.2021.782583/full https://doaj.org/toc/2296-7745 2296-7745 doi:10.3389/fmars.2021.782583 https://doaj.org/article/f17d78af6e054151bf3f75b24f70ac07 Frontiers in Marine Science, Vol 8 (2021) Crassostrea gigas pediveliger larvae ocean acidification transcriptome biological pathways Science Q General. Including nature conservation geographical distribution QH1-199.5 article 2021 ftdoajarticles https://doi.org/10.3389/fmars.2021.782583 2022-12-31T16:22:12Z Elevated carbon dioxide levels in ocean waters, an anthropogenic stressor, can alter the chemical equilibrium of seawater through a process called ocean acidification (OA). The resultant reduction of pH can be detrimental during the early developmental stages of the commercially important edible Pacific oyster Crassostrea gigas; the ability of larvae to join a population is likely to be compromised by declining ocean pH. Given this threat, it is important to study the molecular mechanisms that these organisms use to overcome OA stress at the gene expression level. Here, we performed transcriptome profiling in oyster larvae following exposure to ambient (8.1) and reduced (7.4) pH during the pre-settlement growth period (i.e., 18 d post fertilization) using RNA-seq with Illumina sequencing technology. In total, 1,808 differentially expressed genes (DEGs) were identified, 1,410 of which were matched by BLAST against the Swiss-Prot database. Gene ontology classification showed that most of these DEGs were related to ribosomal, calcium ion binding, cell adhesion and apoptotic processes. Pathway enrichment analysis revealed that low pH (7.4) enhanced energy production and organelle biogenesis but prominently suppressed several immune response pathways. Moreover, activation of the MAPK signaling pathway was observed along with inhibition of the Wnt, VEGF, and ErbB pathways, highlighting the fact that the initiation of stress responses is given priority over larval development or shell growth when the larvae cope with low pH. In conclusion, our study demonstrated a unique gene expression profiling approach in studying oyster larval responses to OA, which not only provides comprehensive insights into the mechanisms underlying oyster tolerance to CO2-driven decreases in ocean pH but also supplies a valuable genomic resource for further studies in this species. Article in Journal/Newspaper Crassostrea gigas Ocean acidification Pacific oyster Directory of Open Access Journals: DOAJ Articles Pacific Frontiers in Marine Science 8
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Crassostrea gigas
pediveliger larvae
ocean acidification
transcriptome
biological pathways
Science
Q
General. Including nature conservation
geographical distribution
QH1-199.5
spellingShingle Crassostrea gigas
pediveliger larvae
ocean acidification
transcriptome
biological pathways
Science
Q
General. Including nature conservation
geographical distribution
QH1-199.5
Ramadoss Dineshram
Shu Xiao
Ginger Wai Kuen Ko
Jun Li
Kovilingal Smrithi
Vengatesen Thiyagarajan
Yang Zhang
Ziniu Yu
Ocean Acidification Triggers Cell Signaling, Suppress Immune and Calcification in the Pacific Oyster Larvae
topic_facet Crassostrea gigas
pediveliger larvae
ocean acidification
transcriptome
biological pathways
Science
Q
General. Including nature conservation
geographical distribution
QH1-199.5
description Elevated carbon dioxide levels in ocean waters, an anthropogenic stressor, can alter the chemical equilibrium of seawater through a process called ocean acidification (OA). The resultant reduction of pH can be detrimental during the early developmental stages of the commercially important edible Pacific oyster Crassostrea gigas; the ability of larvae to join a population is likely to be compromised by declining ocean pH. Given this threat, it is important to study the molecular mechanisms that these organisms use to overcome OA stress at the gene expression level. Here, we performed transcriptome profiling in oyster larvae following exposure to ambient (8.1) and reduced (7.4) pH during the pre-settlement growth period (i.e., 18 d post fertilization) using RNA-seq with Illumina sequencing technology. In total, 1,808 differentially expressed genes (DEGs) were identified, 1,410 of which were matched by BLAST against the Swiss-Prot database. Gene ontology classification showed that most of these DEGs were related to ribosomal, calcium ion binding, cell adhesion and apoptotic processes. Pathway enrichment analysis revealed that low pH (7.4) enhanced energy production and organelle biogenesis but prominently suppressed several immune response pathways. Moreover, activation of the MAPK signaling pathway was observed along with inhibition of the Wnt, VEGF, and ErbB pathways, highlighting the fact that the initiation of stress responses is given priority over larval development or shell growth when the larvae cope with low pH. In conclusion, our study demonstrated a unique gene expression profiling approach in studying oyster larval responses to OA, which not only provides comprehensive insights into the mechanisms underlying oyster tolerance to CO2-driven decreases in ocean pH but also supplies a valuable genomic resource for further studies in this species.
format Article in Journal/Newspaper
author Ramadoss Dineshram
Shu Xiao
Ginger Wai Kuen Ko
Jun Li
Kovilingal Smrithi
Vengatesen Thiyagarajan
Yang Zhang
Ziniu Yu
author_facet Ramadoss Dineshram
Shu Xiao
Ginger Wai Kuen Ko
Jun Li
Kovilingal Smrithi
Vengatesen Thiyagarajan
Yang Zhang
Ziniu Yu
author_sort Ramadoss Dineshram
title Ocean Acidification Triggers Cell Signaling, Suppress Immune and Calcification in the Pacific Oyster Larvae
title_short Ocean Acidification Triggers Cell Signaling, Suppress Immune and Calcification in the Pacific Oyster Larvae
title_full Ocean Acidification Triggers Cell Signaling, Suppress Immune and Calcification in the Pacific Oyster Larvae
title_fullStr Ocean Acidification Triggers Cell Signaling, Suppress Immune and Calcification in the Pacific Oyster Larvae
title_full_unstemmed Ocean Acidification Triggers Cell Signaling, Suppress Immune and Calcification in the Pacific Oyster Larvae
title_sort ocean acidification triggers cell signaling, suppress immune and calcification in the pacific oyster larvae
publisher Frontiers Media S.A.
publishDate 2021
url https://doi.org/10.3389/fmars.2021.782583
https://doaj.org/article/f17d78af6e054151bf3f75b24f70ac07
geographic Pacific
geographic_facet Pacific
genre Crassostrea gigas
Ocean acidification
Pacific oyster
genre_facet Crassostrea gigas
Ocean acidification
Pacific oyster
op_source Frontiers in Marine Science, Vol 8 (2021)
op_relation https://www.frontiersin.org/articles/10.3389/fmars.2021.782583/full
https://doaj.org/toc/2296-7745
2296-7745
doi:10.3389/fmars.2021.782583
https://doaj.org/article/f17d78af6e054151bf3f75b24f70ac07
op_doi https://doi.org/10.3389/fmars.2021.782583
container_title Frontiers in Marine Science
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