Use of genetic algorithms for ocean model parameter optimisation: a case study using PISCES-v2_RC for North Atlantic particulate organic carbon

When working with Earth system models, a considerable challenge that arises is the need to establish the set of parameter values that ensure the optimal model performance in terms of how they reflect real-world observed data. Given that each additional parameter under investigation increases the dim...

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Published in:Geoscientific Model Development
Main Authors: M. Falls, R. Bernardello, M. Castrillo, M. Acosta, J. Llort, M. Galí
Format: Article in Journal/Newspaper
Language:English
Published: Copernicus Publications 2022
Subjects:
Online Access:https://doi.org/10.5194/gmd-15-5713-2022
https://doaj.org/article/eba9ce25a8f44b1e923e1d5c0fb9e91f
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spelling ftdoajarticles:oai:doaj.org/article:eba9ce25a8f44b1e923e1d5c0fb9e91f 2023-05-15T17:31:32+02:00 Use of genetic algorithms for ocean model parameter optimisation: a case study using PISCES-v2_RC for North Atlantic particulate organic carbon M. Falls R. Bernardello M. Castrillo M. Acosta J. Llort M. Galí 2022-07-01T00:00:00Z https://doi.org/10.5194/gmd-15-5713-2022 https://doaj.org/article/eba9ce25a8f44b1e923e1d5c0fb9e91f EN eng Copernicus Publications https://gmd.copernicus.org/articles/15/5713/2022/gmd-15-5713-2022.pdf https://doaj.org/toc/1991-959X https://doaj.org/toc/1991-9603 doi:10.5194/gmd-15-5713-2022 1991-959X 1991-9603 https://doaj.org/article/eba9ce25a8f44b1e923e1d5c0fb9e91f Geoscientific Model Development, Vol 15, Pp 5713-5737 (2022) Geology QE1-996.5 article 2022 ftdoajarticles https://doi.org/10.5194/gmd-15-5713-2022 2022-12-30T22:19:47Z When working with Earth system models, a considerable challenge that arises is the need to establish the set of parameter values that ensure the optimal model performance in terms of how they reflect real-world observed data. Given that each additional parameter under investigation increases the dimensional space of the problem by one, simple brute-force sensitivity tests can quickly become too computationally strenuous. In addition, the complexity of the model and interactions between parameters mean that testing them on an individual basis has the potential to miss key information. In this work, we address these challenges by developing a biased random key genetic algorithm (BRKGA) able to estimate model parameters. This method is tested using the one-dimensional configuration of PISCES-v2_RC, the biogeochemical component of NEMO4 v4.0.1 (Nucleus for European Modelling of the Ocean version 4), a global ocean model. A test case of particulate organic carbon (POC) in the North Atlantic down to 1000 m depth is examined, using observed data obtained from autonomous biogeochemical Argo floats. In this case, two sets of tests are run, namely one where each of the model outputs are compared to the model outputs with default settings and another where they are compared with three sets of observed data from their respective regions, which is followed by a cross-reference of the results. The results of these analyses provide evidence that this approach is robust and consistent and also that it provides an indication of the sensitivity of parameters on variables of interest. Given the deviation in the optimal set of parameters from the default, further analyses using observed data in other locations are recommended to establish the validity of the results obtained. Article in Journal/Newspaper North Atlantic Directory of Open Access Journals: DOAJ Articles Geoscientific Model Development 15 14 5713 5737
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Geology
QE1-996.5
spellingShingle Geology
QE1-996.5
M. Falls
R. Bernardello
M. Castrillo
M. Acosta
J. Llort
M. Galí
Use of genetic algorithms for ocean model parameter optimisation: a case study using PISCES-v2_RC for North Atlantic particulate organic carbon
topic_facet Geology
QE1-996.5
description When working with Earth system models, a considerable challenge that arises is the need to establish the set of parameter values that ensure the optimal model performance in terms of how they reflect real-world observed data. Given that each additional parameter under investigation increases the dimensional space of the problem by one, simple brute-force sensitivity tests can quickly become too computationally strenuous. In addition, the complexity of the model and interactions between parameters mean that testing them on an individual basis has the potential to miss key information. In this work, we address these challenges by developing a biased random key genetic algorithm (BRKGA) able to estimate model parameters. This method is tested using the one-dimensional configuration of PISCES-v2_RC, the biogeochemical component of NEMO4 v4.0.1 (Nucleus for European Modelling of the Ocean version 4), a global ocean model. A test case of particulate organic carbon (POC) in the North Atlantic down to 1000 m depth is examined, using observed data obtained from autonomous biogeochemical Argo floats. In this case, two sets of tests are run, namely one where each of the model outputs are compared to the model outputs with default settings and another where they are compared with three sets of observed data from their respective regions, which is followed by a cross-reference of the results. The results of these analyses provide evidence that this approach is robust and consistent and also that it provides an indication of the sensitivity of parameters on variables of interest. Given the deviation in the optimal set of parameters from the default, further analyses using observed data in other locations are recommended to establish the validity of the results obtained.
format Article in Journal/Newspaper
author M. Falls
R. Bernardello
M. Castrillo
M. Acosta
J. Llort
M. Galí
author_facet M. Falls
R. Bernardello
M. Castrillo
M. Acosta
J. Llort
M. Galí
author_sort M. Falls
title Use of genetic algorithms for ocean model parameter optimisation: a case study using PISCES-v2_RC for North Atlantic particulate organic carbon
title_short Use of genetic algorithms for ocean model parameter optimisation: a case study using PISCES-v2_RC for North Atlantic particulate organic carbon
title_full Use of genetic algorithms for ocean model parameter optimisation: a case study using PISCES-v2_RC for North Atlantic particulate organic carbon
title_fullStr Use of genetic algorithms for ocean model parameter optimisation: a case study using PISCES-v2_RC for North Atlantic particulate organic carbon
title_full_unstemmed Use of genetic algorithms for ocean model parameter optimisation: a case study using PISCES-v2_RC for North Atlantic particulate organic carbon
title_sort use of genetic algorithms for ocean model parameter optimisation: a case study using pisces-v2_rc for north atlantic particulate organic carbon
publisher Copernicus Publications
publishDate 2022
url https://doi.org/10.5194/gmd-15-5713-2022
https://doaj.org/article/eba9ce25a8f44b1e923e1d5c0fb9e91f
genre North Atlantic
genre_facet North Atlantic
op_source Geoscientific Model Development, Vol 15, Pp 5713-5737 (2022)
op_relation https://gmd.copernicus.org/articles/15/5713/2022/gmd-15-5713-2022.pdf
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container_title Geoscientific Model Development
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