Quantitative label-free proteomic analysis of human urine to identify novel candidate protein biomarkers for schistosomiasis.

Schistosomiasis is a chronic neglected tropical disease that is characterized by continued inflammatory challenges to the exposed population and it has been established as a possible risk factor in the aetiology of bladder cancer. Improved diagnosis of schistosomiasis and its associated pathology is...

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Published in:PLOS Neglected Tropical Diseases
Main Authors: Olugbenga Samson Onile, Bridget Calder, Nelson C Soares, Chiaka I Anumudu, Jonathan M Blackburn
Format: Article in Journal/Newspaper
Language:English
Published: Public Library of Science (PLoS) 2017
Subjects:
Online Access:https://doi.org/10.1371/journal.pntd.0006045
https://doaj.org/article/e6fdd11bba4b44a9a22344afa4de443b
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spelling ftdoajarticles:oai:doaj.org/article:e6fdd11bba4b44a9a22344afa4de443b 2023-05-15T15:11:02+02:00 Quantitative label-free proteomic analysis of human urine to identify novel candidate protein biomarkers for schistosomiasis. Olugbenga Samson Onile Bridget Calder Nelson C Soares Chiaka I Anumudu Jonathan M Blackburn 2017-11-01T00:00:00Z https://doi.org/10.1371/journal.pntd.0006045 https://doaj.org/article/e6fdd11bba4b44a9a22344afa4de443b EN eng Public Library of Science (PLoS) http://europepmc.org/articles/PMC5695849?pdf=render https://doaj.org/toc/1935-2727 https://doaj.org/toc/1935-2735 1935-2727 1935-2735 doi:10.1371/journal.pntd.0006045 https://doaj.org/article/e6fdd11bba4b44a9a22344afa4de443b PLoS Neglected Tropical Diseases, Vol 11, Iss 11, p e0006045 (2017) Arctic medicine. Tropical medicine RC955-962 Public aspects of medicine RA1-1270 article 2017 ftdoajarticles https://doi.org/10.1371/journal.pntd.0006045 2022-12-31T13:07:03Z Schistosomiasis is a chronic neglected tropical disease that is characterized by continued inflammatory challenges to the exposed population and it has been established as a possible risk factor in the aetiology of bladder cancer. Improved diagnosis of schistosomiasis and its associated pathology is possible through mass spectrometry to identify biomarkers among the infected population, which will influence early detection of the disease and its subtle morbidity.A high-throughput proteomic approach was used to analyse human urine samples for 49 volunteers from Eggua, a schistosomiasis endemic community in South-West, Nigeria. The individuals were previously screened for Schistosoma haematobium and structural bladder pathologies via microscopy and ultrasonography respectively. Samples were categorised into schistosomiasis, schistosomiasis with bladder pathology, bladder pathology, and a normal healthy control group. These samples were analysed to identify potential protein biomarkers.A total of 1306 proteins and 9701 unique peptides were observed in this study (FDR = 0.01). Fifty-four human proteins were found to be potential biomarkers for schistosomiasis and bladder pathologies due to schistosomiasis by label-free quantitative comparison between groups. Thirty-six (36) parasite-derived potential biomarkers were also identified, which include some existing putative schistosomiasis biomarkers that have been previously reported. Some of these proteins include Elongation factor 1 alpha, phosphopyruvate hydratase, histone H4 and heat shock proteins (HSP 60, HSP 70).These findings provide an in-depth analysis of potential schistosoma and human host protein biomarkers for diagnosis of chronic schistosomiasis caused by Schistosoma haematobium and its pathogenesis. Article in Journal/Newspaper Arctic Directory of Open Access Journals: DOAJ Articles Arctic PLOS Neglected Tropical Diseases 11 11 e0006045
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Arctic medicine. Tropical medicine
RC955-962
Public aspects of medicine
RA1-1270
spellingShingle Arctic medicine. Tropical medicine
RC955-962
Public aspects of medicine
RA1-1270
Olugbenga Samson Onile
Bridget Calder
Nelson C Soares
Chiaka I Anumudu
Jonathan M Blackburn
Quantitative label-free proteomic analysis of human urine to identify novel candidate protein biomarkers for schistosomiasis.
topic_facet Arctic medicine. Tropical medicine
RC955-962
Public aspects of medicine
RA1-1270
description Schistosomiasis is a chronic neglected tropical disease that is characterized by continued inflammatory challenges to the exposed population and it has been established as a possible risk factor in the aetiology of bladder cancer. Improved diagnosis of schistosomiasis and its associated pathology is possible through mass spectrometry to identify biomarkers among the infected population, which will influence early detection of the disease and its subtle morbidity.A high-throughput proteomic approach was used to analyse human urine samples for 49 volunteers from Eggua, a schistosomiasis endemic community in South-West, Nigeria. The individuals were previously screened for Schistosoma haematobium and structural bladder pathologies via microscopy and ultrasonography respectively. Samples were categorised into schistosomiasis, schistosomiasis with bladder pathology, bladder pathology, and a normal healthy control group. These samples were analysed to identify potential protein biomarkers.A total of 1306 proteins and 9701 unique peptides were observed in this study (FDR = 0.01). Fifty-four human proteins were found to be potential biomarkers for schistosomiasis and bladder pathologies due to schistosomiasis by label-free quantitative comparison between groups. Thirty-six (36) parasite-derived potential biomarkers were also identified, which include some existing putative schistosomiasis biomarkers that have been previously reported. Some of these proteins include Elongation factor 1 alpha, phosphopyruvate hydratase, histone H4 and heat shock proteins (HSP 60, HSP 70).These findings provide an in-depth analysis of potential schistosoma and human host protein biomarkers for diagnosis of chronic schistosomiasis caused by Schistosoma haematobium and its pathogenesis.
format Article in Journal/Newspaper
author Olugbenga Samson Onile
Bridget Calder
Nelson C Soares
Chiaka I Anumudu
Jonathan M Blackburn
author_facet Olugbenga Samson Onile
Bridget Calder
Nelson C Soares
Chiaka I Anumudu
Jonathan M Blackburn
author_sort Olugbenga Samson Onile
title Quantitative label-free proteomic analysis of human urine to identify novel candidate protein biomarkers for schistosomiasis.
title_short Quantitative label-free proteomic analysis of human urine to identify novel candidate protein biomarkers for schistosomiasis.
title_full Quantitative label-free proteomic analysis of human urine to identify novel candidate protein biomarkers for schistosomiasis.
title_fullStr Quantitative label-free proteomic analysis of human urine to identify novel candidate protein biomarkers for schistosomiasis.
title_full_unstemmed Quantitative label-free proteomic analysis of human urine to identify novel candidate protein biomarkers for schistosomiasis.
title_sort quantitative label-free proteomic analysis of human urine to identify novel candidate protein biomarkers for schistosomiasis.
publisher Public Library of Science (PLoS)
publishDate 2017
url https://doi.org/10.1371/journal.pntd.0006045
https://doaj.org/article/e6fdd11bba4b44a9a22344afa4de443b
geographic Arctic
geographic_facet Arctic
genre Arctic
genre_facet Arctic
op_source PLoS Neglected Tropical Diseases, Vol 11, Iss 11, p e0006045 (2017)
op_relation http://europepmc.org/articles/PMC5695849?pdf=render
https://doaj.org/toc/1935-2727
https://doaj.org/toc/1935-2735
1935-2727
1935-2735
doi:10.1371/journal.pntd.0006045
https://doaj.org/article/e6fdd11bba4b44a9a22344afa4de443b
op_doi https://doi.org/10.1371/journal.pntd.0006045
container_title PLOS Neglected Tropical Diseases
container_volume 11
container_issue 11
container_start_page e0006045
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