The Biodiversity of Calcaxonian Octocorals from the Irish Continental Slope Inferred from Multilocus Mitochondrial Barcoding

Deep-sea corals are important benthic inhabitants that support the biodiversity and function of the wider faunal community; however, their taxonomy is underdeveloped and their accurate identification is often difficult. In our study, we investigated the utility of a superextended (>3000 bp) barco...

Full description

Bibliographic Details
Published in:Diversity
Main Authors: Declan Morrissey, Candice B. Untiedt, Karen Croke, Aisling Robinson, Eva Turley, A. Louise Allcock
Format: Article in Journal/Newspaper
Language:English
Published: MDPI AG 2022
Subjects:
Online Access:https://doi.org/10.3390/d14070576
https://doaj.org/article/e607da604660470e8ad6ea5add2897c0
id ftdoajarticles:oai:doaj.org/article:e607da604660470e8ad6ea5add2897c0
record_format openpolar
spelling ftdoajarticles:oai:doaj.org/article:e607da604660470e8ad6ea5add2897c0 2023-05-15T17:41:36+02:00 The Biodiversity of Calcaxonian Octocorals from the Irish Continental Slope Inferred from Multilocus Mitochondrial Barcoding Declan Morrissey Candice B. Untiedt Karen Croke Aisling Robinson Eva Turley A. Louise Allcock 2022-07-01T00:00:00Z https://doi.org/10.3390/d14070576 https://doaj.org/article/e607da604660470e8ad6ea5add2897c0 EN eng MDPI AG https://www.mdpi.com/1424-2818/14/7/576 https://doaj.org/toc/1424-2818 doi:10.3390/d14070576 1424-2818 https://doaj.org/article/e607da604660470e8ad6ea5add2897c0 Diversity, Vol 14, Iss 576, p 576 (2022) Keratoisididae Primnoidae Chrysogorgiidae Chelidonisididae deep sea species delimitation Biology (General) QH301-705.5 article 2022 ftdoajarticles https://doi.org/10.3390/d14070576 2022-12-30T20:00:22Z Deep-sea corals are important benthic inhabitants that support the biodiversity and function of the wider faunal community; however, their taxonomy is underdeveloped and their accurate identification is often difficult. In our study, we investigated the utility of a superextended (>3000 bp) barcode and explored the effectiveness of various molecular species delimitation techniques with an aim to put upper and lower bounds on the estimated number of calcaxonian species in Irish waters. We collected 112 calcaxonians (70 Keratoisididae, 22 Primnoidae, 20 Chrysogorgiidae) and one chelidonisid from the Irish continental slope and sequenced a 3390 bp DNA barcode comprising four mitochondrial regions ( mtMutS , COI + igr1, 16S rRNA- ND2 , and igr4), recovering 38 haplotypes. Individuals that shared a haplotype were often morphologically distinct, and we thus undertook detailed morphological work, including SEM of sclerites, on one representative of each morphotype within each haplotype. GMYC, bGMYC, and mPTP returned incongruent estimates of species numbers. In total, there are between 25 and 40 species, although no definitive number could be assigned, primarily due to poorly defined keratoisidid species boundaries. As expected, the superextended barcode provided greater discrimination power than single markers; bGMYC appeared to be the most effective delimiter. Among the identified species were Chelidonisis aurantiaca , collected deeper than previously known at 1507 m, and Calyptrophora clinata, recorded for the second time from the Northeast Atlantic. A full understanding of the diversity and distribution of calcaxonians requires substantial taxonomic work, but we highlight the Irish continental slope as harbouring significant diversity. Article in Journal/Newspaper Northeast Atlantic Directory of Open Access Journals: DOAJ Articles Diversity 14 7 576
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Keratoisididae
Primnoidae
Chrysogorgiidae
Chelidonisididae
deep sea
species delimitation
Biology (General)
QH301-705.5
spellingShingle Keratoisididae
Primnoidae
Chrysogorgiidae
Chelidonisididae
deep sea
species delimitation
Biology (General)
QH301-705.5
Declan Morrissey
Candice B. Untiedt
Karen Croke
Aisling Robinson
Eva Turley
A. Louise Allcock
The Biodiversity of Calcaxonian Octocorals from the Irish Continental Slope Inferred from Multilocus Mitochondrial Barcoding
topic_facet Keratoisididae
Primnoidae
Chrysogorgiidae
Chelidonisididae
deep sea
species delimitation
Biology (General)
QH301-705.5
description Deep-sea corals are important benthic inhabitants that support the biodiversity and function of the wider faunal community; however, their taxonomy is underdeveloped and their accurate identification is often difficult. In our study, we investigated the utility of a superextended (>3000 bp) barcode and explored the effectiveness of various molecular species delimitation techniques with an aim to put upper and lower bounds on the estimated number of calcaxonian species in Irish waters. We collected 112 calcaxonians (70 Keratoisididae, 22 Primnoidae, 20 Chrysogorgiidae) and one chelidonisid from the Irish continental slope and sequenced a 3390 bp DNA barcode comprising four mitochondrial regions ( mtMutS , COI + igr1, 16S rRNA- ND2 , and igr4), recovering 38 haplotypes. Individuals that shared a haplotype were often morphologically distinct, and we thus undertook detailed morphological work, including SEM of sclerites, on one representative of each morphotype within each haplotype. GMYC, bGMYC, and mPTP returned incongruent estimates of species numbers. In total, there are between 25 and 40 species, although no definitive number could be assigned, primarily due to poorly defined keratoisidid species boundaries. As expected, the superextended barcode provided greater discrimination power than single markers; bGMYC appeared to be the most effective delimiter. Among the identified species were Chelidonisis aurantiaca , collected deeper than previously known at 1507 m, and Calyptrophora clinata, recorded for the second time from the Northeast Atlantic. A full understanding of the diversity and distribution of calcaxonians requires substantial taxonomic work, but we highlight the Irish continental slope as harbouring significant diversity.
format Article in Journal/Newspaper
author Declan Morrissey
Candice B. Untiedt
Karen Croke
Aisling Robinson
Eva Turley
A. Louise Allcock
author_facet Declan Morrissey
Candice B. Untiedt
Karen Croke
Aisling Robinson
Eva Turley
A. Louise Allcock
author_sort Declan Morrissey
title The Biodiversity of Calcaxonian Octocorals from the Irish Continental Slope Inferred from Multilocus Mitochondrial Barcoding
title_short The Biodiversity of Calcaxonian Octocorals from the Irish Continental Slope Inferred from Multilocus Mitochondrial Barcoding
title_full The Biodiversity of Calcaxonian Octocorals from the Irish Continental Slope Inferred from Multilocus Mitochondrial Barcoding
title_fullStr The Biodiversity of Calcaxonian Octocorals from the Irish Continental Slope Inferred from Multilocus Mitochondrial Barcoding
title_full_unstemmed The Biodiversity of Calcaxonian Octocorals from the Irish Continental Slope Inferred from Multilocus Mitochondrial Barcoding
title_sort biodiversity of calcaxonian octocorals from the irish continental slope inferred from multilocus mitochondrial barcoding
publisher MDPI AG
publishDate 2022
url https://doi.org/10.3390/d14070576
https://doaj.org/article/e607da604660470e8ad6ea5add2897c0
genre Northeast Atlantic
genre_facet Northeast Atlantic
op_source Diversity, Vol 14, Iss 576, p 576 (2022)
op_relation https://www.mdpi.com/1424-2818/14/7/576
https://doaj.org/toc/1424-2818
doi:10.3390/d14070576
1424-2818
https://doaj.org/article/e607da604660470e8ad6ea5add2897c0
op_doi https://doi.org/10.3390/d14070576
container_title Diversity
container_volume 14
container_issue 7
container_start_page 576
_version_ 1766143249128357888