The Genome of the Beluga Whale (Delphinapterus leucas)

The beluga whale is a cetacean that inhabits arctic and subarctic regions, and is the only living member of the genus Delphinapterus. The genome of the beluga whale was determined using DNA sequencing approaches that employed both microfluidic partitioning library and non-partitioned library constru...

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Published in:Genes
Main Authors: Steven J. M. Jones, Gregory A. Taylor, Simon Chan, René L. Warren, S. Austin Hammond, Steven Bilobram, Gideon Mordecai, Curtis A. Suttle, Kristina M. Miller, Angela Schulze, Amy M. Chan, Samantha J. Jones, Kane Tse, Irene Li, Dorothy Cheung, Karen L. Mungall, Caleb Choo, Adrian Ally, Noreen Dhalla, Angela K. Y. Tam, Armelle Troussard, Heather Kirk, Pawan Pandoh, Daniel Paulino, Robin J. N. Coope, Andrew J. Mungall, Richard Moore, Yongjun Zhao, Inanc Birol, Yussanne Ma, Marco Marra, Martin Haulena
Format: Article in Journal/Newspaper
Language:English
Published: MDPI AG 2017
Subjects:
Online Access:https://doi.org/10.3390/genes8120378
https://doaj.org/article/e17101b2240c49eba2f6f146b2f2d244
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spelling ftdoajarticles:oai:doaj.org/article:e17101b2240c49eba2f6f146b2f2d244 2023-05-15T15:01:38+02:00 The Genome of the Beluga Whale (Delphinapterus leucas) Steven J. M. Jones Gregory A. Taylor Simon Chan René L. Warren S. Austin Hammond Steven Bilobram Gideon Mordecai Curtis A. Suttle Kristina M. Miller Angela Schulze Amy M. Chan Samantha J. Jones Kane Tse Irene Li Dorothy Cheung Karen L. Mungall Caleb Choo Adrian Ally Noreen Dhalla Angela K. Y. Tam Armelle Troussard Heather Kirk Pawan Pandoh Daniel Paulino Robin J. N. Coope Andrew J. Mungall Richard Moore Yongjun Zhao Inanc Birol Yussanne Ma Marco Marra Martin Haulena 2017-12-01T00:00:00Z https://doi.org/10.3390/genes8120378 https://doaj.org/article/e17101b2240c49eba2f6f146b2f2d244 EN eng MDPI AG https://www.mdpi.com/2073-4425/8/12/378 https://doaj.org/toc/2073-4425 2073-4425 doi:10.3390/genes8120378 https://doaj.org/article/e17101b2240c49eba2f6f146b2f2d244 Genes, Vol 8, Iss 12, p 378 (2017) genome genome assembly beluga whale Delphinapterus leucas Cetacea Genetics QH426-470 article 2017 ftdoajarticles https://doi.org/10.3390/genes8120378 2022-12-31T15:42:03Z The beluga whale is a cetacean that inhabits arctic and subarctic regions, and is the only living member of the genus Delphinapterus. The genome of the beluga whale was determined using DNA sequencing approaches that employed both microfluidic partitioning library and non-partitioned library construction. The former allowed for the construction of a highly contiguous assembly with a scaffold N50 length of over 19 Mbp and total reconstruction of 2.32 Gbp. To aid our understanding of the functional elements, transcriptome data was also derived from brain, duodenum, heart, lung, spleen, and liver tissue. Assembled sequence and all of the underlying sequence data are available at the National Center for Biotechnology Information (NCBI) under the Bioproject accession number PRJNA360851A. Article in Journal/Newspaper Arctic Beluga Beluga whale Beluga* Delphinapterus leucas Subarctic Directory of Open Access Journals: DOAJ Articles Arctic Genes 8 12 378
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic genome
genome assembly
beluga whale
Delphinapterus leucas
Cetacea
Genetics
QH426-470
spellingShingle genome
genome assembly
beluga whale
Delphinapterus leucas
Cetacea
Genetics
QH426-470
Steven J. M. Jones
Gregory A. Taylor
Simon Chan
René L. Warren
S. Austin Hammond
Steven Bilobram
Gideon Mordecai
Curtis A. Suttle
Kristina M. Miller
Angela Schulze
Amy M. Chan
Samantha J. Jones
Kane Tse
Irene Li
Dorothy Cheung
Karen L. Mungall
Caleb Choo
Adrian Ally
Noreen Dhalla
Angela K. Y. Tam
Armelle Troussard
Heather Kirk
Pawan Pandoh
Daniel Paulino
Robin J. N. Coope
Andrew J. Mungall
Richard Moore
Yongjun Zhao
Inanc Birol
Yussanne Ma
Marco Marra
Martin Haulena
The Genome of the Beluga Whale (Delphinapterus leucas)
topic_facet genome
genome assembly
beluga whale
Delphinapterus leucas
Cetacea
Genetics
QH426-470
description The beluga whale is a cetacean that inhabits arctic and subarctic regions, and is the only living member of the genus Delphinapterus. The genome of the beluga whale was determined using DNA sequencing approaches that employed both microfluidic partitioning library and non-partitioned library construction. The former allowed for the construction of a highly contiguous assembly with a scaffold N50 length of over 19 Mbp and total reconstruction of 2.32 Gbp. To aid our understanding of the functional elements, transcriptome data was also derived from brain, duodenum, heart, lung, spleen, and liver tissue. Assembled sequence and all of the underlying sequence data are available at the National Center for Biotechnology Information (NCBI) under the Bioproject accession number PRJNA360851A.
format Article in Journal/Newspaper
author Steven J. M. Jones
Gregory A. Taylor
Simon Chan
René L. Warren
S. Austin Hammond
Steven Bilobram
Gideon Mordecai
Curtis A. Suttle
Kristina M. Miller
Angela Schulze
Amy M. Chan
Samantha J. Jones
Kane Tse
Irene Li
Dorothy Cheung
Karen L. Mungall
Caleb Choo
Adrian Ally
Noreen Dhalla
Angela K. Y. Tam
Armelle Troussard
Heather Kirk
Pawan Pandoh
Daniel Paulino
Robin J. N. Coope
Andrew J. Mungall
Richard Moore
Yongjun Zhao
Inanc Birol
Yussanne Ma
Marco Marra
Martin Haulena
author_facet Steven J. M. Jones
Gregory A. Taylor
Simon Chan
René L. Warren
S. Austin Hammond
Steven Bilobram
Gideon Mordecai
Curtis A. Suttle
Kristina M. Miller
Angela Schulze
Amy M. Chan
Samantha J. Jones
Kane Tse
Irene Li
Dorothy Cheung
Karen L. Mungall
Caleb Choo
Adrian Ally
Noreen Dhalla
Angela K. Y. Tam
Armelle Troussard
Heather Kirk
Pawan Pandoh
Daniel Paulino
Robin J. N. Coope
Andrew J. Mungall
Richard Moore
Yongjun Zhao
Inanc Birol
Yussanne Ma
Marco Marra
Martin Haulena
author_sort Steven J. M. Jones
title The Genome of the Beluga Whale (Delphinapterus leucas)
title_short The Genome of the Beluga Whale (Delphinapterus leucas)
title_full The Genome of the Beluga Whale (Delphinapterus leucas)
title_fullStr The Genome of the Beluga Whale (Delphinapterus leucas)
title_full_unstemmed The Genome of the Beluga Whale (Delphinapterus leucas)
title_sort genome of the beluga whale (delphinapterus leucas)
publisher MDPI AG
publishDate 2017
url https://doi.org/10.3390/genes8120378
https://doaj.org/article/e17101b2240c49eba2f6f146b2f2d244
geographic Arctic
geographic_facet Arctic
genre Arctic
Beluga
Beluga whale
Beluga*
Delphinapterus leucas
Subarctic
genre_facet Arctic
Beluga
Beluga whale
Beluga*
Delphinapterus leucas
Subarctic
op_source Genes, Vol 8, Iss 12, p 378 (2017)
op_relation https://www.mdpi.com/2073-4425/8/12/378
https://doaj.org/toc/2073-4425
2073-4425
doi:10.3390/genes8120378
https://doaj.org/article/e17101b2240c49eba2f6f146b2f2d244
op_doi https://doi.org/10.3390/genes8120378
container_title Genes
container_volume 8
container_issue 12
container_start_page 378
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