New insights into the genome repetitive fraction of the Antarctic bivalve Adamussium colbecki.

Repetitive DNA represents the major component of the genome in both plant and animal species. It includes transposable elements (TEs), which are dispersed throughout the genome, and satellite DNAs (satDNAs), which are tandemly organized in long arrays. The study of the structure and organization of...

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Published in:PLOS ONE
Main Authors: Maria Assunta Biscotti, Marco Barucca, Adriana Canapa
Format: Article in Journal/Newspaper
Language:English
Published: Public Library of Science (PLoS) 2018
Subjects:
R
Q
Online Access:https://doi.org/10.1371/journal.pone.0194502
https://doaj.org/article/e0e0916be78f4292b5d828608f91b89a
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spelling ftdoajarticles:oai:doaj.org/article:e0e0916be78f4292b5d828608f91b89a 2023-05-15T13:43:06+02:00 New insights into the genome repetitive fraction of the Antarctic bivalve Adamussium colbecki. Maria Assunta Biscotti Marco Barucca Adriana Canapa 2018-01-01T00:00:00Z https://doi.org/10.1371/journal.pone.0194502 https://doaj.org/article/e0e0916be78f4292b5d828608f91b89a EN eng Public Library of Science (PLoS) http://europepmc.org/articles/PMC5874043?pdf=render https://doaj.org/toc/1932-6203 1932-6203 doi:10.1371/journal.pone.0194502 https://doaj.org/article/e0e0916be78f4292b5d828608f91b89a PLoS ONE, Vol 13, Iss 3, p e0194502 (2018) Medicine R Science Q article 2018 ftdoajarticles https://doi.org/10.1371/journal.pone.0194502 2022-12-30T22:27:04Z Repetitive DNA represents the major component of the genome in both plant and animal species. It includes transposable elements (TEs), which are dispersed throughout the genome, and satellite DNAs (satDNAs), which are tandemly organized in long arrays. The study of the structure and organization of repetitive DNA contributes to our understanding of genome architecture and the mechanisms leading to its evolution. Molluscs represent one of the largest groups of invertebrates and include organisms with a wide variety of morphologies and lifestyles. To increase our knowledge of bivalves at the genome level, we analysed the Antarctic scallop Adamussium colbecki. The screening of the genomic library evidenced the presence of two novel satDNA elements and the CvA transposon. The interspecific investigation performed in this study demonstrated that one of the two satDNAs isolated in A. colbecki is widespread in polar molluscan species, indicating a possible link between repetitive DNA and abiotic factors. Moreover, the transcriptional activity of CvA and its presence in long-diverged bivalves suggests a possible role for this ancient element in shaping the genome architecture of this clade. Article in Journal/Newspaper Antarc* Antarctic Directory of Open Access Journals: DOAJ Articles Antarctic The Antarctic PLOS ONE 13 3 e0194502
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Medicine
R
Science
Q
spellingShingle Medicine
R
Science
Q
Maria Assunta Biscotti
Marco Barucca
Adriana Canapa
New insights into the genome repetitive fraction of the Antarctic bivalve Adamussium colbecki.
topic_facet Medicine
R
Science
Q
description Repetitive DNA represents the major component of the genome in both plant and animal species. It includes transposable elements (TEs), which are dispersed throughout the genome, and satellite DNAs (satDNAs), which are tandemly organized in long arrays. The study of the structure and organization of repetitive DNA contributes to our understanding of genome architecture and the mechanisms leading to its evolution. Molluscs represent one of the largest groups of invertebrates and include organisms with a wide variety of morphologies and lifestyles. To increase our knowledge of bivalves at the genome level, we analysed the Antarctic scallop Adamussium colbecki. The screening of the genomic library evidenced the presence of two novel satDNA elements and the CvA transposon. The interspecific investigation performed in this study demonstrated that one of the two satDNAs isolated in A. colbecki is widespread in polar molluscan species, indicating a possible link between repetitive DNA and abiotic factors. Moreover, the transcriptional activity of CvA and its presence in long-diverged bivalves suggests a possible role for this ancient element in shaping the genome architecture of this clade.
format Article in Journal/Newspaper
author Maria Assunta Biscotti
Marco Barucca
Adriana Canapa
author_facet Maria Assunta Biscotti
Marco Barucca
Adriana Canapa
author_sort Maria Assunta Biscotti
title New insights into the genome repetitive fraction of the Antarctic bivalve Adamussium colbecki.
title_short New insights into the genome repetitive fraction of the Antarctic bivalve Adamussium colbecki.
title_full New insights into the genome repetitive fraction of the Antarctic bivalve Adamussium colbecki.
title_fullStr New insights into the genome repetitive fraction of the Antarctic bivalve Adamussium colbecki.
title_full_unstemmed New insights into the genome repetitive fraction of the Antarctic bivalve Adamussium colbecki.
title_sort new insights into the genome repetitive fraction of the antarctic bivalve adamussium colbecki.
publisher Public Library of Science (PLoS)
publishDate 2018
url https://doi.org/10.1371/journal.pone.0194502
https://doaj.org/article/e0e0916be78f4292b5d828608f91b89a
geographic Antarctic
The Antarctic
geographic_facet Antarctic
The Antarctic
genre Antarc*
Antarctic
genre_facet Antarc*
Antarctic
op_source PLoS ONE, Vol 13, Iss 3, p e0194502 (2018)
op_relation http://europepmc.org/articles/PMC5874043?pdf=render
https://doaj.org/toc/1932-6203
1932-6203
doi:10.1371/journal.pone.0194502
https://doaj.org/article/e0e0916be78f4292b5d828608f91b89a
op_doi https://doi.org/10.1371/journal.pone.0194502
container_title PLOS ONE
container_volume 13
container_issue 3
container_start_page e0194502
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