Microbial nitrogen cycling in Arctic snowpacks

Arctic snowpacks are often considered as chemical reactors for a variety of chemicals deposited through wet and dry events, but are overlooked as potential sites for microbial metabolism of reactive nitrogen species. The fate of deposited species is critical since warming leads to the transfer of co...

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Published in:Environmental Research Letters
Main Authors: Catherine Larose, Aurélien Dommergue, Timothy M Vogel
Format: Article in Journal/Newspaper
Language:English
Published: IOP Publishing 2013
Subjects:
Q
Online Access:https://doi.org/10.1088/1748-9326/8/3/035004
https://doaj.org/article/de91073bb9e14778ab2f99be8fdba65b
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spelling ftdoajarticles:oai:doaj.org/article:de91073bb9e14778ab2f99be8fdba65b 2023-09-05T13:16:57+02:00 Microbial nitrogen cycling in Arctic snowpacks Catherine Larose Aurélien Dommergue Timothy M Vogel 2013-01-01T00:00:00Z https://doi.org/10.1088/1748-9326/8/3/035004 https://doaj.org/article/de91073bb9e14778ab2f99be8fdba65b EN eng IOP Publishing https://doi.org/10.1088/1748-9326/8/3/035004 https://doaj.org/toc/1748-9326 doi:10.1088/1748-9326/8/3/035004 1748-9326 https://doaj.org/article/de91073bb9e14778ab2f99be8fdba65b Environmental Research Letters, Vol 8, Iss 3, p 035004 (2013) nitrogen cycle metagenomics microbial ecology Environmental technology. Sanitary engineering TD1-1066 Environmental sciences GE1-350 Science Q Physics QC1-999 article 2013 ftdoajarticles https://doi.org/10.1088/1748-9326/8/3/035004 2023-08-13T00:37:34Z Arctic snowpacks are often considered as chemical reactors for a variety of chemicals deposited through wet and dry events, but are overlooked as potential sites for microbial metabolism of reactive nitrogen species. The fate of deposited species is critical since warming leads to the transfer of contaminants to snowmelt-fed ecosystems. Here, we examined the role of microorganisms and the potential pathways involved in nitrogen cycling in the snow. Next generation sequencing data were used to follow functional gene abundances and a 16S rRNA (ribosomal ribonucleic acid) gene microarray was used to follow shifts in microbial community structure during a two-month spring-time field study at a high Arctic site, Svalbard, Norway (79° N). We showed that despite the low temperatures and limited water supply, microbial communities inhabiting the snow cover demonstrated dynamic shifts in their functional potential to follow several different pathways of the nitrogen cycle. In addition, microbial specific phylogenetic probes tracked different nitrogen species over time. For example, probes for Roseomonas tracked nitrate concentrations closely and probes for Caulobacter tracked ammonium concentrations after a delay of one week. Nitrogen cycling was also shown to be a dominant process at the base of the snowpack. Article in Journal/Newspaper Arctic Svalbard Directory of Open Access Journals: DOAJ Articles Arctic Norway Svalbard Environmental Research Letters 8 3 035004
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic nitrogen cycle
metagenomics
microbial ecology
Environmental technology. Sanitary engineering
TD1-1066
Environmental sciences
GE1-350
Science
Q
Physics
QC1-999
spellingShingle nitrogen cycle
metagenomics
microbial ecology
Environmental technology. Sanitary engineering
TD1-1066
Environmental sciences
GE1-350
Science
Q
Physics
QC1-999
Catherine Larose
Aurélien Dommergue
Timothy M Vogel
Microbial nitrogen cycling in Arctic snowpacks
topic_facet nitrogen cycle
metagenomics
microbial ecology
Environmental technology. Sanitary engineering
TD1-1066
Environmental sciences
GE1-350
Science
Q
Physics
QC1-999
description Arctic snowpacks are often considered as chemical reactors for a variety of chemicals deposited through wet and dry events, but are overlooked as potential sites for microbial metabolism of reactive nitrogen species. The fate of deposited species is critical since warming leads to the transfer of contaminants to snowmelt-fed ecosystems. Here, we examined the role of microorganisms and the potential pathways involved in nitrogen cycling in the snow. Next generation sequencing data were used to follow functional gene abundances and a 16S rRNA (ribosomal ribonucleic acid) gene microarray was used to follow shifts in microbial community structure during a two-month spring-time field study at a high Arctic site, Svalbard, Norway (79° N). We showed that despite the low temperatures and limited water supply, microbial communities inhabiting the snow cover demonstrated dynamic shifts in their functional potential to follow several different pathways of the nitrogen cycle. In addition, microbial specific phylogenetic probes tracked different nitrogen species over time. For example, probes for Roseomonas tracked nitrate concentrations closely and probes for Caulobacter tracked ammonium concentrations after a delay of one week. Nitrogen cycling was also shown to be a dominant process at the base of the snowpack.
format Article in Journal/Newspaper
author Catherine Larose
Aurélien Dommergue
Timothy M Vogel
author_facet Catherine Larose
Aurélien Dommergue
Timothy M Vogel
author_sort Catherine Larose
title Microbial nitrogen cycling in Arctic snowpacks
title_short Microbial nitrogen cycling in Arctic snowpacks
title_full Microbial nitrogen cycling in Arctic snowpacks
title_fullStr Microbial nitrogen cycling in Arctic snowpacks
title_full_unstemmed Microbial nitrogen cycling in Arctic snowpacks
title_sort microbial nitrogen cycling in arctic snowpacks
publisher IOP Publishing
publishDate 2013
url https://doi.org/10.1088/1748-9326/8/3/035004
https://doaj.org/article/de91073bb9e14778ab2f99be8fdba65b
geographic Arctic
Norway
Svalbard
geographic_facet Arctic
Norway
Svalbard
genre Arctic
Svalbard
genre_facet Arctic
Svalbard
op_source Environmental Research Letters, Vol 8, Iss 3, p 035004 (2013)
op_relation https://doi.org/10.1088/1748-9326/8/3/035004
https://doaj.org/toc/1748-9326
doi:10.1088/1748-9326/8/3/035004
1748-9326
https://doaj.org/article/de91073bb9e14778ab2f99be8fdba65b
op_doi https://doi.org/10.1088/1748-9326/8/3/035004
container_title Environmental Research Letters
container_volume 8
container_issue 3
container_start_page 035004
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