Soil pH is a key determinant of soil fungal community composition in the Ny-Ålesund Region, Svalbard (High Arctic)

This study assessed the fungal community composition and its relationships with properties of surface soils in the Ny-Ålesund Region (Svalbard, High Arctic). A total of thirteen soil samples were collected and soil fungal community was analyzed by 454 pyrosequencing with fungi-specific primers targe...

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Published in:Frontiers in Microbiology
Main Authors: Tao eZhang, Nengfei eWang, Hong-Yu eLiu, Yu-Qin eZhang, Li-Yan eYu
Format: Article in Journal/Newspaper
Language:English
Published: Frontiers Media S.A. 2016
Subjects:
Online Access:https://doi.org/10.3389/fmicb.2016.00227
https://doaj.org/article/dc41186723584968939b948ab62070f4
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spelling ftdoajarticles:oai:doaj.org/article:dc41186723584968939b948ab62070f4 2023-05-15T14:48:20+02:00 Soil pH is a key determinant of soil fungal community composition in the Ny-Ålesund Region, Svalbard (High Arctic) Tao eZhang Nengfei eWang Hong-Yu eLiu Yu-Qin eZhang Li-Yan eYu 2016-02-01T00:00:00Z https://doi.org/10.3389/fmicb.2016.00227 https://doaj.org/article/dc41186723584968939b948ab62070f4 EN eng Frontiers Media S.A. http://journal.frontiersin.org/Journal/10.3389/fmicb.2016.00227/full https://doaj.org/toc/1664-302X 1664-302X doi:10.3389/fmicb.2016.00227 https://doaj.org/article/dc41186723584968939b948ab62070f4 Frontiers in Microbiology, Vol 7 (2016) high-throughput sequencing soil fungi soil properties Arctic tundra Fungal community composition Microbiology QR1-502 article 2016 ftdoajarticles https://doi.org/10.3389/fmicb.2016.00227 2022-12-31T13:05:36Z This study assessed the fungal community composition and its relationships with properties of surface soils in the Ny-Ålesund Region (Svalbard, High Arctic). A total of thirteen soil samples were collected and soil fungal community was analyzed by 454 pyrosequencing with fungi-specific primers targeting the rDNA internal transcribed spacer (ITS) region. The following eight soil properties were analyzed: pH, organic carbon (C), organic nitrogen (N), ammonium nitrogen (NH4+-N), silicate silicon (SiO42--Si), nitrite nitrogen (NO2--N), phosphate phosphorus (PO43--P) and nitrate nitrogen (NO3--N). A total of 57,952 reads belonging to 541 operational taxonomic units (OTUs) were found. Of these OTUs, 343 belonged to Ascomycota, 100 to Basidiomycota, 31 to Chytridiomycota, 22 to Glomeromycota, 11 to Zygomycota, 10 to Rozellomycota, whereas 24 belonged to unknown fungi. The dominant orders were Helotiales, Verrucariales, Agaricales, Lecanorales, Chaetothyriales, Lecideales, and Capnodiales. The common genera (>8 soil samples) were Tetracladium, Mortierella, Fusarium, Cortinarius, and Atla. Distance-based redundancy analysis (db-rda) and analysis of similarities (ANOSIM) revealed that soil pH (p=0.001) was the most significant factor in determining the soil fungal community composition. Members of Verrucariales were found to predominate in soils of pH 8-9, whereas Sordariales predominated in soils of pH 7-8 and Coniochaetales predominated in soil samples of pH 6-7. The results suggest the presence and distribution of diverse soil fungal communities in the High Arctic, which can provide reliable data for studying the ecological responses of soil fungal communities to climate changes in the Arctic. Article in Journal/Newspaper Arctic Ny Ålesund Ny-Ålesund Svalbard Tundra Directory of Open Access Journals: DOAJ Articles Arctic Ny-Ålesund Svalbard Frontiers in Microbiology 7
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic high-throughput sequencing
soil fungi
soil properties
Arctic tundra
Fungal community composition
Microbiology
QR1-502
spellingShingle high-throughput sequencing
soil fungi
soil properties
Arctic tundra
Fungal community composition
Microbiology
QR1-502
Tao eZhang
Nengfei eWang
Hong-Yu eLiu
Yu-Qin eZhang
Li-Yan eYu
Soil pH is a key determinant of soil fungal community composition in the Ny-Ålesund Region, Svalbard (High Arctic)
topic_facet high-throughput sequencing
soil fungi
soil properties
Arctic tundra
Fungal community composition
Microbiology
QR1-502
description This study assessed the fungal community composition and its relationships with properties of surface soils in the Ny-Ålesund Region (Svalbard, High Arctic). A total of thirteen soil samples were collected and soil fungal community was analyzed by 454 pyrosequencing with fungi-specific primers targeting the rDNA internal transcribed spacer (ITS) region. The following eight soil properties were analyzed: pH, organic carbon (C), organic nitrogen (N), ammonium nitrogen (NH4+-N), silicate silicon (SiO42--Si), nitrite nitrogen (NO2--N), phosphate phosphorus (PO43--P) and nitrate nitrogen (NO3--N). A total of 57,952 reads belonging to 541 operational taxonomic units (OTUs) were found. Of these OTUs, 343 belonged to Ascomycota, 100 to Basidiomycota, 31 to Chytridiomycota, 22 to Glomeromycota, 11 to Zygomycota, 10 to Rozellomycota, whereas 24 belonged to unknown fungi. The dominant orders were Helotiales, Verrucariales, Agaricales, Lecanorales, Chaetothyriales, Lecideales, and Capnodiales. The common genera (>8 soil samples) were Tetracladium, Mortierella, Fusarium, Cortinarius, and Atla. Distance-based redundancy analysis (db-rda) and analysis of similarities (ANOSIM) revealed that soil pH (p=0.001) was the most significant factor in determining the soil fungal community composition. Members of Verrucariales were found to predominate in soils of pH 8-9, whereas Sordariales predominated in soils of pH 7-8 and Coniochaetales predominated in soil samples of pH 6-7. The results suggest the presence and distribution of diverse soil fungal communities in the High Arctic, which can provide reliable data for studying the ecological responses of soil fungal communities to climate changes in the Arctic.
format Article in Journal/Newspaper
author Tao eZhang
Nengfei eWang
Hong-Yu eLiu
Yu-Qin eZhang
Li-Yan eYu
author_facet Tao eZhang
Nengfei eWang
Hong-Yu eLiu
Yu-Qin eZhang
Li-Yan eYu
author_sort Tao eZhang
title Soil pH is a key determinant of soil fungal community composition in the Ny-Ålesund Region, Svalbard (High Arctic)
title_short Soil pH is a key determinant of soil fungal community composition in the Ny-Ålesund Region, Svalbard (High Arctic)
title_full Soil pH is a key determinant of soil fungal community composition in the Ny-Ålesund Region, Svalbard (High Arctic)
title_fullStr Soil pH is a key determinant of soil fungal community composition in the Ny-Ålesund Region, Svalbard (High Arctic)
title_full_unstemmed Soil pH is a key determinant of soil fungal community composition in the Ny-Ålesund Region, Svalbard (High Arctic)
title_sort soil ph is a key determinant of soil fungal community composition in the ny-ålesund region, svalbard (high arctic)
publisher Frontiers Media S.A.
publishDate 2016
url https://doi.org/10.3389/fmicb.2016.00227
https://doaj.org/article/dc41186723584968939b948ab62070f4
geographic Arctic
Ny-Ålesund
Svalbard
geographic_facet Arctic
Ny-Ålesund
Svalbard
genre Arctic
Ny Ålesund
Ny-Ålesund
Svalbard
Tundra
genre_facet Arctic
Ny Ålesund
Ny-Ålesund
Svalbard
Tundra
op_source Frontiers in Microbiology, Vol 7 (2016)
op_relation http://journal.frontiersin.org/Journal/10.3389/fmicb.2016.00227/full
https://doaj.org/toc/1664-302X
1664-302X
doi:10.3389/fmicb.2016.00227
https://doaj.org/article/dc41186723584968939b948ab62070f4
op_doi https://doi.org/10.3389/fmicb.2016.00227
container_title Frontiers in Microbiology
container_volume 7
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